• Molecules and Cells
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• v.19 no.1
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• pp.104-113
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• 2005

Large inversions are well characterized in the chloroplast genomes of land plants. In contrast, reports of small inversions are rare and involve limited plant groups. In this study, we report the widespread occurrence of small inversions ranging from 5 to 50 bp in fully and partially sequenced chloroplast genomes of both monocots and dicots. We found that small inversions were much more common than large inversions. The small inversions were scattered over the chloroplast genome including the IR, SSC, and LSC regions. Several small inversions were uncovered in chloroplast genomes even though they shared the same overall gene order. The majority of these small inversions were located within 100 bp downstream of the 3' ends of genes. All had inverted repeat sequences, ranging from 11 to 24 bp, at their ends. Such small inversions form stem-loop hairpin structures that usually have the function of stabilizing the corresponding mRNA molecules. Intra-molecular recombination between the inverted sequences in the stem-forming regions are responsible for generating flip-flop orientations of the loops. The presence of two different orientations of the stem-loop in the trnL-F noncoding region of a single species of Jasminum elegans suggests that a short inversion can be generated within a short period of time. Small inversions of non-coding sequences may influence sequence alignment and character interpretation in phylogeny reconstructions, as shown in nine species of Jasminum. Many small inversions may have been generated by parallel or back mutation events during chloroplast genome evolution. Our data indicate that caution is needed when using chloroplast non-coding sequences for phylogenetic analysis.

• Journal of agriculture & life science
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• v.45 no.3
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• pp.9-18
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• 2011

This study was performed to investigate species diversity of understory in Mt. Biryong. The quadrat size was installed based on the result of analysis of Species-Area Curve. The vascular plants were enlisted 107 taxa: 47 families, 80 genera, 91 species, 11 varieties, 2 subspecies, and 3 forms. The three taxa such as Carex okamotoi, Philadelphus schrenkii var. schrenkii, and Weigela subsessilis were enlisted from the surveyed sites as the Korean endemic plants. Due to the list from the Korea Forestry Administration, Rhododendron micranthum was enlisted as the rare plant. The growth from was categorized followed by forbs, shrubs and trees, respectively.

• Journal of Korean Society of Water and Wastewater
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• v.35 no.1
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• pp.53-61
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• 2021

The quantified analysis of damages to wastewater treatment plants by natural disasters is essential to maintain the stability of wastewater treatment systems. However, studies on the quantified analysis of natural disaster effects on wastewater treatment systems are very rare. In this study, a total disaster index (DI) was developed to quantify the various damages to wastewater treatment systems from natural disasters using two statistical methods (i.e., AHP: analytic hierarchy process and PCA: principal component analysis). Typhoons, heavy rain, and earthquakes are considered as three major natural disasters for the development of the DI. A total of 15 input variables from public open-source data (e.g., statistical yearbook of wastewater treatment system, meteorological data and financial status in local governments) were used for the development of a DI for 199 wastewater treatment plants in Korea. The total DI was calculated from the weighted sum of the disaster indices of the three natural disasters (i.e., TI for typhoon, RI for heavy rain, and EI for earthquake). The three disaster indices of each natural disaster were determined from four components, such as possibility of occurrence and expected damages. The relative weights of the four components to calculate the disaster indices (TI, RI and EI) for each of the three natural disasters were also determined from AHP. PCA was used to determine the relative weights of the input variables to calculate the four components. The relative weights of TI, RI and EI to calculate total DI were determined as 0.547, 0.306, and 0.147 respectively.

• Journal of People, Plants, and Environment
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• v.24 no.6
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• pp.619-628
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• 2021

Background and objective: Native to the limestone zones of the Korean Peninsula, Zabelia tyaihyonii is a popular plant for landscaping. As it is now classified as a rare species, the conservation of its genetic resources is necessary. Methods: In this study, which aimed to understand the morphological variation of Z. tyaihyonii, 18 characteristics of Z. tyaihyonii from five habitats were examined. Results: Of these 18 characteristics, 16 characteristics showed significant differences among sites, and the coefficient of variation ranged from 5.4% (for corolla lobe number) to 31.3% (for flower number). Notable variations were observed in the size of flower and calyx lobe. When the corolla length and calyx lobe length were used as the classification key of Z. tyaihyonii, the sites were divided into those with small, intermediate, and large values. Hair was observed on the filament of all samples, a finding which conflicts with an earlier report. Rather than classifying Z. tyaihyonii into different species on the basis of corolla length (COL) and calyx lobe length (CALL) values, we recommend modifying the species description to incorporate the variation in these characteristics of interest. Principal component analysis results showed that the first main component was highly correlated with the traits related to the size of the calyx lobe (length: 0.819, width: 0.758), and the second main component was highly correlated with the traits related with the size of the inflorescence (length: 0.790, width: 0.626). Conclusion: Several notable variations were identified among the characteristics related to inflorescence and calyx lobe. There is little genetic exchange among groups, or each group is influenced by micro environmental factors, because sites that are located nearby. In addition, the difference between COL and CALL, which is used as the classification key for Z. tyaihyonii, was divided into small group, large group, and intermediate group, regardless of the sites' geographical distance.

• Journal of Forest and Environmental Science
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• v.26 no.3
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• pp.219-223
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• 2010

It has long been recognized that wild vegetation are sort of improving fitness. Many peoples are now ingesting them instead of the vegetables that are grown in green house. In this regard, Parasenecio firmus, which is considered to be one of the rare species in Korea, has been given a lot of attentions as edible green plants recently. Hence it may be necessary to provide the information people who want to commercially cultivate the plants. Regarding appropriate forest stands that are fit for the cultivation. Firstly, we collected the seeds from 4 natural habitats to find out how many seeds are fully matured in the natural conditions. The quality of the seeds collected were found to be very low. However, it appeared as clear differences when screened seeds were grown in covered seed beds over winter. In this case the germination rate of the seeds was 95%, indicating that there may be no difficulty for mass production of plantlets. Secondly, in the field of planting test in an appropriate cultivating site among 6 of forest stands, those in Pinus koraiensis stand were the highest in survival rate, but somewhat low with those in Quercus mongolica and broad-leaved stands. Thus, it was demonstrated that forest stands dominated with conifer like P. koraiensis are more appropriate for the cultivation of P. firums.

• Korean Journal of Plant Resources
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• v.22 no.5
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• pp.365-380
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• 2009

Flora of vascular plants in mountains located at Wonju-si and Hoengseong-gun areas such as Chiak-san(1,288m), Taegi-san(1,261.4m), Obong-san(1,126.2m), Eungbong-san(1,094.9m), Eodab-san(789.4m), Deokgo-san(521.2m), Deokga-san(700.5m) and Seongji-bong(791m) was investigated from April, 2008 to May, 2009, and results from the previous researches in which voucher specimens had been presented from Balgyo-san(998.4m), Oeum-san(930.4m), Baekun-san(1,037.1m) and Chiak-san(1,288m) were included in the list of vascular plants from these areas. This investigations resulted in 804 taxa consisted of 680 species, 1 subspecies, 111 varieties, and 12 forms of 383 genera under 97 families, and totally in 973 taxa (21.14% of all vascular plants in Korea) of 818 species, 1 subspecies, 138 varieties and 16 forms of 418 genera under 105 families on addition of voucher specimens in the previous researches. Forests of the investigated areas were generally mixed of Pinus densiflora and deciduous trees. The areas with comparatively excellent vegetation were valley from Guryong-sa (temple) to Biro-bong (summit) via Seryeom-pokpo (fall) in Mt. Chiak-san, and Keunseong-gol (valley) and eastern slope from Taegibungyo-teo to Naksu-dae (fall) in Mt. Taegi-san. 10 families with abundantly collected species were Compositae, Graminae, Rosaceae, Ranunculaceae, Leguminosae, Cyperaceae, Liliaceae, Saxifragaceae, Umbelliferae and Labiatae in order, and they occuied 49.12% of all collected taxa. Endemic plants found in these areas were 38 taxa including Hanabusaya asiatica, Megaleranthis saniculifolia, and Pyrus ussuriensis var. diamantica, and rare and endangered ones were 24 taxa including Hanabusaya asiatica, Viola websteri, Viola diamantica, and Patrina saniculaefolia. Specially designated plants by the Ministry of Environment were 88 taxa including 12 taxa of 5th degree such as Woodsia intermedia, Hanabusaya asiatica, Equisetum pratense, Iris koreana, Lilium cernum, Trillium tschonoskii, Magnolia kobus(cultivated), Gastrodia elata, Polypodium virginianum, Cimicifuga heracleifolia, Megaleranthis saniculifolia and Viola websteri. 47 taxa of alien plants were found. As to 609 taxa (13.23% of all vascular plants in Korea) of useful plants, 334 taxa for the edible, 269 taxa for the medicinal, 127 taxa for the ornamental, 332 taxa for the forage, 3 taxa for the industrial raw material, 31 taxa for the timber and 13 taxa for the fiber were classified, respectively.

• Korean Journal of Environment and Ecology
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• v.35 no.5
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• pp.438-479
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• 2021

Basic information such as flora and their distribution are the key factors to consider for preserving plant diversity on a regional level. The number of plant species identified through a survey is closely related to the survey area and the number of habitats distributed within the survey area. In this study, we surveyed the flora of Mt. Maryong-san (PH) and Mt. Daeso-san (YH) located in Uljin-gun, Gyeongsangbuk-do, six and nine times, respectively. We planned to include a variety of habitats in the survey routes. As a result, we identified a total of 594 taxa composing of 112 families, 349 genera, 548 species, 10 subspecies, 34 varieties, and 2 formulas in the Mt. Maryong-san (PH) area and a total of 434 taxa composing of 89 families, 270 genera, 400 species, 9 subspecies, and 25 varieties in the Mt. Daeso-san (YH) area. Of the plants observed in the 21 habitats, the plants distributed in the transition zone around the valley and the dry grassland accounted for the highest proportion. The traditional graveyards located on the coast also served as the major habitat for the distribution of some plant species. In the two graveyards, 19 taxa of endemic plant species were surveyed. Moreover, the identified floristic target species included 1 taxon for grade V, 11 taxa for grade IV, and 24 taxa for grade III. A total of 77 taxa of naturalized plants were identified, and four of them were invasive alien plants as designated by the Ministry of Environment. The differences in the plants distributed in the area of Mt. Maryong-san (PH) and Mt. Daeso-san (YH) were mainly due to the difference in the size of each habitat distributed within the survey area. Moreover, it was judged that the entire vicinity of Mt. Daeso-san (YH) was not connected to the surrounding mountains and was an isolated area surrounded by farmland and residential areas.

• Korean Journal of Environment and Ecology
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• v.25 no.3
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• pp.284-294
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• 2011

This study was conducted to investigate the flora of habitats distributed with Allium victorialis var. platyphyllum populations in the South Korea. The vascular plants were surveyed 4 times from March 2009 to June 2010. The flora of studied area was listed as 214 taxa; 64 families, 142 genus, 181 species, 2 subspecies, 30 varieties, 1 forma. According to the specific plant species by classes, class I has 17 taxa; 15 families, 16 genus, 15 species, 2 varieties. Class II has 16 taxa; 13 families, 16 genus, 15 species, 2 varieties. Class III has 20 taxa; 16 families, 19 genus, 18 species, 2 varieties. Class III has 20 taxa; 16 families, 19 genus, 18 species, 2 varieties. Class IV has 23 taxa; 20 families, 23 genus, 19 species, 4 varieties. Class V has 2 taxa; 2 families, 2 genus, 2 species. Rare plant was 12 taxa; 9 families, 11 genus, 10 species, 2 varieties. Endemic plant was 21 taxa; 17 families, 19 genus, 18 species, 3 varieties. Endangered plant was not present in study area. It was considered that the ecosystem was probably stabilized for nothing of naturalized species and ecosystem disturbance species there. The characteristics of growth environments in the habitats with Allium victorialis var. platyphyllum were considered to be related to valley species and subalpine species such as Actinidia polygama, Cornus controversa, Rhododendron brachycarpum and Sorbus commixta.

• Journal of the Korean earth science society
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• v.43 no.2
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• pp.303-311
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• 2022

Gadolinium, commonly used as a contrast agent for magnetic resonance imaging (MRI), is discharged into aquatic environments without removal after treatment in wastewater treatment plants (WWTPs) because of its high stability. In this study, we collected water samples from Suyeong WWTP, Busan, to investigate the dissolved rare earth element (REE) removal capacity of each wastewater treatment process and to evaluate the discharge of anthropogenic Gd (Gd_anth) from effluents. As wastewater passed through each stage of treatment, the concentrations of light REEs (La-Eu) decreased, whereas those of heavy REEs (Tb-Lu) were relatively consistent. Negative Sm anomalies (<1) were observed in several samples, indicating that Sm can be removed by adsorption onto particles or phosphate during the biological removal process. Positive Gd anomalies (149±50, n=9) were observed in all samples. The ratios of Gd_anth concentrations to measured Gd concentrations in all wastewater treatment processes were higher than 97%. This indicates that Gd_anth was discharged to the Suyeong River without removal during the wastewater treatment process. Considering the daily treatment capacity in each process, the total flux of Gd_anth was estimated to be 259 mmol/day. Our results suggest that mid- and/or long-term monitoring of Gd is needed because Gd_anth is continuously discharged into Suyeong Bay through WWTPs.

• Korean Journal of Agricultural and Forest Meteorology
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• v.14 no.4
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• pp.196-206
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• 2012

Studies of seasonal changes in $C_3/C_4$ mixed communities are rare, particularly in Asian summer monsoon climate zones. In our present study, seasonal changes in the profile and coverage of $C_3$ and $C_4$ plants were investigated in 2009 in Haenam, Yeongdong and Cheorwon regions of South Korea (all at different latitudes). The aim was to estimate the impacts of temperature and sunshine duration on species composition and transition timing of the $C_3$ and $C_4$ plants. From our results, the number of $C_3$ plants was found to increase from early spring to mid-May, and then decrease again until September in the Haenam and Yeongdong regions, but continuously increase from early spring to September in the Cheorwon region under relatively low summer temperatures. On the other hand, the number of $C_4$ plants increased from June or July to September in all three regions. These seasonal changes in species number and ratio have a direct impact upon species diversity which is highest when there are no dominant species. The relative coverage and relative summed dominance ratio (SDR') of the $C_3$ plants decreased from spring to autumn, but increased for the $C_4$ plants during this time in an exponential fashion with increasing accumulated temperature and sunshine duration. The transition timing from $C_3$ to $C_4$ plants occurred when the sum of sunshine duration for the days with daily mean temperature above $5^{\circ}C$ was 1017 hrs for the SDR'.