• Applied Microscopy
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• 제40권4호
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• pp.261-266
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• 2010

미토콘드리아에서 생성하는 ATP는 미토콘드리아의 속막에 존재하는 전자전달계 효소(electron transferase)에 의해 생성되며, 이러한 전자전달계 효소는 복합체 I, II, III, IV, V로 구성되어 있다고 알려져 있다. ATP는 ATPase에 의해 생성되며, ATPase는 $F_0$와 $F_1$ 소복합체로 구성되어 있다. 미토콘드리아의 외막에는 Porin 또는 VDAC(voltage-dependent anion-selective channel)이라고 알려져 있는 미세한 구멍 형태의 단백질이 존재하며, 세포질에 존재하는 succinate, malate, ATP와 같은 음전하용질 또는 전자를 선택적으로 통과시키는 역할을 수행하는 것으로 보고된 바 있다. 본 연구에서는 소의 심근 미토콘드리아에 존재하고 있는 porin과 ATPase의 기능과 분포의 관계를 알아보기 위하여, porin과 ATPase Ⅴ-${\beta}$ 항체를 면역반응법을 이용한 광학현미경과 이중면역반응법을 이용한 형광현미경으로 확인하고, 심근 미토콘드리아의 두 단백질 분포를 면역황금표지법을 이용한 전자현미경으로 관찰하였다. 미토콘드리아에서 porin 항체에 대한 미토콘드리아 조직항원의 발색은 조직내에서 전반적으로 관찰할 수 있었으며, ATPase 항체에 대한 조직항원의 발색은 세로면에서 관찰되었다. 이중면역응법에서 porin 항체와 ATPase는 각각 다른 조직에서 발색이 관찰되거나, 같은 조직 내에서 관찰되었다. 면역황금표지법에서 porin 항체는 미토콘드리아의 바깥막에서 황금입자가 표지된 것을 확인할 수 있었으며, ATPase는 미토콘드리아의 속막에서 황금입자가 표지된 것을 확인할 수 있었다. 그러나 ATPase 항체가 황금입자로 표지되지 않은 미토콘드리아도 확인되었다. 이러한 결과로 porin 항체와 ATPase 항체는 미토콘드리아의 바깥막과 속막에 각각 분포양상을 확인하였다. porin 항체의 발색으로 인한 조직 내의 미토콘드리아가 존재하고 있음을 확인할 수 있었으며, ATPase 항체의 발색으로 인한 ATP를 생성하는 미토콘드리아를 확인할 수 있었다. 하지만 porin 항체의 반응으로 확인된 미토콘드리아가 반드시 ATP를 생성하는 것은 아니라는 것을 추측할 수 있었다.

• Applied Microscopy
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• 제38권2호
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• pp.125-133
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• 2008

Mitochondria 내막의 cytochrome-c-oxidase는 세포의 에너지 생합성에 중요한 요소이며, 세포자멸사와 각종세포의 병리학적 현상과 밀접한 연관성이 있는 전자전달계효소로 알려져 있다. Porin 단백은 mitochondria 내막과 외막에 분포하는 효소단백으로 전자전달계효소 형성과 ATP 운반에 관여하는 것으로 알려져 있다. 따라서 면역현미경법을 사용하여 cytochrome-c-oxidase의 분포와 porin 단백과의 연관성을 확인하여 mitochondria의 cristae에 분포하는 cytochrome-c-oxidase의 형성과 변화를 알아보고자 하였다. Cardiac muscle tissue의 sarcoplasm에는 많은 수의 mitochondria가 분포하며, cytochrome-c-oxidase가 풍부한 mitochondria와 porin 단백이 풍부한 mitochondria로 구별되었다. Cytochrome-c-oxidase가 풍부한 mitochondria는 porin 단백이 빈약하고 porin 단백이 풍부한 mitochondria는 cytochrome-c-oxidase가 소량 포함되어 있는 것으로 관찰되었다. 심근조직의 부위에 따라 근형질에 분포하는 mitochondria에 cytochrome-c-oxidase가 풍부한 mitochondria와 porin 단백이 풍부한 mitochondria가 각각 상이하게 분포하였다. 이상의 결과로 미성숙 mitochondria는 많은 양의 porin 단백을 함유하여 근형질로부터 단백질 소단위를 mitochondria 막내로 운반하여 cytochrome-c-oxidase를 형성시키고 mitochondria가 성숙하면서 ATP를 운반할 최소한 양의 porin 단백만을 남기고 소멸되는 것으로 추측된다.

• 대한의생명과학회지
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• 제10권2호
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• pp.153-161
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• 2004

Antibiotic resistance is often associated with the production of inner membrane proteins (for example, AcrAB/TolC efflux pump) that are capable to extrude antibiotics, detergents, dyes and organic solvents. In order to evaluate the unknown MarB function of Escherichia coli, especially focused on the function of OmpF porin, several mutants were construted by T4GT7 transduction. MarA plays a major roles in mar (multiple antibiotic resistance) phenotype with AcrAB/TolC efflux pump in E. coli K-12. Futhermore, MarA decreases OmpF porin expression via micF antisense RNA. Expression of acrAB is increased in strains containing mutation in marR, and in those carrying multicopy plasmid expressing marA. MarB protein of E. coli K-12 showed its activity at OmpF porin & TolC protein as target molecule. Some paper reported MarB positively regulates OmpF function. MarA shows mar phenotype, and MarB along with MarA show decreased MIC through OmpF function. By this experiment, MarB could decrease MIC through the OmpF porin & TolC protein as target.

• Journal of Microbiology and Biotechnology
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• 제19권9호
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• pp.1034-1040
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• 2009

Porin proteins of Gram-negative bacteria are outer membrane proteins that act as receptors for bacteriophages and are involved in a variety of functions like solute transport, pathogenesis, and immunity. Salmonella enterica serovar Typhi (S. Typhi), a Gram-negative bacterium, is the causative agent of typhoid fever. Porins of S. Typhi have been shown to have a potential role in diagnostics and vaccination. In the present study, the major outer membrane proteins OmpF and OmpC from S. Typhi were cloned in pQE30UA vector and expressed in E. coli. The immunogenic nature of the recombinant porin proteins were evaluated by ELISA by raising hyperimmune sera in Swiss Albino mice with three different adjuvants (i.e., Freund's adjuvant and two human-compatible adjuvants like montanide and aluminium hydroxide gel) and proved to be immunogenic. The recombinant OmpF and OmpC generated in this work may be used for further studies for vaccination and diagnostics.

• Molecules and Cells
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• 제39권9호
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• pp.705-713
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• 2016

The efficiency of Agrobacterium-mediated transformation in plants depends on the virulence of Agrobacterium strains, the plant tissue culture conditions, and the susceptibility of host plants. Understanding the molecular interactions between Agrobacterium and host plant cells is crucial when manipulating the susceptibility of recalcitrant crop plants and protecting orchard trees from crown gall disease. It was discovered that Arabidopsis voltage-dependent anion channel 1 (atvdac1) mutant has drastic effects on Agrobacterium-mediated tumorigenesis and growth developmental phenotypes, and that these effects are dependent on a Ws-0 genetic background. Genetic complementation of Arabidopsis vdac1 mutants and yeast porin1-deficient strain with members of the AtVDAC gene family revealed that AtVDAC1 is required for Agrobacterium-mediated transformation, and there is weak functional redundancy between AtVDAC1 and AtVDAC3, which is independent of porin activity. Furthermore, atvdac1 mutants were deficient in transient and stable transformation by Agrobacterium, suggesting that AtVDAC1 is involved in the early stages of Agrobacterium infection prior to transferred-DNA (T-DNA) integration. Transgenic plants overexpressing AtVDAC1 not only complemented the phenotypes of the atvdac1 mutant, but also showed high efficiency of transient T-DNA gene expression; however, the efficiency of stable transformation was not affected. Moreover, the effect of phytohormone treatment on competence to Agrobacterium was compromised in atvdac1 mutants. These data indicate that AtVDAC1 regulates the competence of Arabidopsis to Agrobacterium infection.

• Journal of Microbiology and Biotechnology
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• 제31권5호
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• pp.645-658
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• 2021

Porins are essential for the viability of Gram-negative bacteria. They ensure the uptake of nutrients, can be involved in the maintenance of outer membrane integrity and define the antibiotic or drug resistance of organisms. The function and structure of porins in proteobacteria is well described, while their function in photoautotrophic cyanobacteria has not been systematically explored. We compared the domain architecture of nine putative porins in the filamentous cyanobacterium Anabaena sp. PCC 7120 and analyzed the seven candidates with predicted OprB-domain. Single recombinant mutants of the seven genes were created and their growth capacity under different conditions was analyzed. Most of the putative porins seem to be involved in the transport of salt and copper, as respective mutants were resistant to elevated concentrations of these substances. In turn, only the mutant of alr2231 was less sensitive to elevated zinc concentrations, while mutants of alr0834, alr4741 and all4499 were resistant to high manganese concentrations. Notably the mutant of alr4550 shows a high sensitivity against harmful compounds, which is indicative for a function related to the maintenance of outer membrane integrity. Moreover, the mutant of all5191 exhibited a phenotype which suggests either a higher nitrate demand or an inefficient nitrogen fixation. The dependency of porin membrane insertion on Omp85 proteins was tested exemplarily for Alr4550, and an enhanced aggregation of Alr4550 was observed in two omp85 mutants. The comparative analysis of porin mutants suggests that the proteins in parts perform distinct functions related to envelope integrity and solute uptake.

• 한국생명과학회:학술대회논문집
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• 한국생명과학회 2007년도 제48회 학술심포지움 및 추계국제학술대회
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• pp.78.1-78.1
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• 2007

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• Journal of Microbiology and Biotechnology
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• 제15권6호
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• pp.1214-1220
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• 2005

Decreased porin-mediated outer membrane penetration of hydrophilic antibiotics is a common mechanism of antibiotic resistance in Gram-negative bacteria. This study was undertaken to determine whether a null mutation in Pseudomonas putida would suppress porin synthesis, and therefore reduce the susceptibility of the organism to streptomycin, norfloxacin, and tetracycline. Inverse PCR amplification and double-stranded DNA sequencing were used to identify chromosomal genes carrying TnphoA'-1 inserts. Genome database available was used to identify putative homologue genes, one of which encodes protein with homology to domains of the MutS of P. putida, suggesting a crucial role in the multidrug resistance. Increased resistance to streptomycin, norfloxacin, and tetracycline might be due to accumulation of compensatory mutations. Either no growth or slow growth was observed in P. putida KH1027 when grown in minimal medium containing gluconate, glucose, or citrate; however, it is not clear whether the growth patterns contributed to the multidrug resistance.

• Journal of Microbiology and Biotechnology
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• 제18권5호
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• pp.845-851
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• 2008

TolC is an outer membrane porin protein and an essential component of drug efflux and type-I secretion systems in Gram-negative bacteria. TolC comprises a periplasmic $\alpha$-helical barrel domain and a membrane-embedded $\beta$-barrel domain. TdeA, a functional and structural homolog of TolC, is required for toxin and drug export in the pathogenic oral bacterium Actinobacillus actinomycetemcomitans. Here, we report the expression of the periplasmic domain of TdeA as a soluble protein by substitution of the membrane-embedded domain with short linkers, which enabled us to purify the protein in the absence of detergent. We confirmed the structural integrity of the TdeA periplasmic domain by size-exclusion chromatography, circular dichroism spectroscopy, and electron microscopy, which together showed that the periplasmic domain of the TolC protein family fold correctly on its own. We further demonstrated that the periplasmic domain of TdeA interacts with peptidoglycans of the bacterial cell wall, which supports the idea that completely folded TolC family proteins traverse the peptidoglycan layer to interact with inner membrane transporters.

• 생명과학회지
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• 제18권1호
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• pp.84-90
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• 2008

충청남도 병천면 일대의 6곳의 토양시료를 채취하여 망간을 산화하는 균주들을 순수분리 하고, 이 중 망간 산화능이 가장 우수한 한 균주를 최종 선별하여 본 실험에 사용하였다. 최종 선별된 균주의 생리, 생화학적 특성을 조사하고, 16S rRNA 염기 서열분석 등을 통하여 동정한 결과 최종 선별된 균주는 Pseudomonas sp. MN5로 확인되었다. Pseudomonas sp. MN5은 fructose와 maltose를 제외한 다양한 당을 이용하지 못하였으며, 항생제인 kanamycin, chloramphenicol, streptomycin 그리고 tetracycline에는 높은 감수성을 보이고, 리튬, 망간, 바륨과 같은 중금속에 대해서는 mg/ml 단위의 높은 내성을 나타냈다. 그리고 Pseudomonas sp. MN5의 망간산화 최적 pH는 7.5이고, 망간산화 활성이 proteinase K와 가열처리를 한 시료에서 저해되었다. Pseudomonas sp. MN5가 생성하는 망간산화 단백질을 ammonium sulfate precipitation, HiTrap Q FF ion exchange chromatography 그리고 G3000sw $_{XL}$ gel filtration chromatography를 통해서 정제한 결과, 15 kDa, 46.7 kDa 그리고 63.5 kDa의 세종류의 manganese oxidizing protein가 확인되었고, 내부서 열과 N-말단 서열 분석 결과 Pseudomonas sp. MN5가 생성하는 망간산화 단백질은 외막의 porin 단백질인 것으로 추정되었다.