• Title/Summary/Keyword: pmmC

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Expression and Cloning of the pmmC Gene Encoding Phosphomannomutase in Sphingomonas chungbukensis DJ77 (Sphingomonas chungbukensis DJ77 균주에서 Phosphomannomutase를 암호화하는 pmmC 유전자의 클로닝과 발현)

  • Kim Mi-Hye;Choi Jung-Do;Shin Malshick;Kim Young-Chang
    • Microbiology and Biotechnology Letters
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    • v.33 no.2
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    • pp.84-89
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    • 2005
  • Phosphomannomutase (PMM) is a key enzyme in prokaryotes and eukaryotes, which catalyzes the conversion of ${\alpha}$-D-mannose 6-phosphate to ${\alpha}$-D-mannose 1-phosphate. The latter is the substrate for the synthesis of GDP-mannose, which serves as the mannosyl donor for many metabolic pathways in the cells. We report here on the isolation of a gene from a genomic library of Sphingomonas chungbukensis DJ77, the pmmC gene encoding phosphomannomutase. The gene was cloned into E. coli expression vector, and the sequence was analyzed. The ribosomal binding site GGAAG lays 5 bp upstream of the ORF of 750 bp, which is initiated by ATG codon and terminated by TAG. The predicted sequence of the enzyme consists of 249 amino acids with a molecular mass of 27.4 kDa and showed $86.9\%$ similarity to that of eukaryotic phosphomannomutase after bioinformatical analyses with the conserved domain search of NCBI. The purified gene product revealed the activity of phosphomannomutase. In conclusion, we confirmed that pmmC gene encodes phosphomannomutase actually.

Evaluation of vibration damping rate performance according to polymer mixing rate of polymer mixed mortar through ultrasonic pulse analysis (초음파 펄스 분석을 통한 폴리머 혼입 모르타르의 폴리머 혼입률에 따른 진동감쇠율 성능 평가)

  • Jeong, Min-Goo;Jang, Jong-Min;Lee, Gwang-Su;Lee, Han-Seung
    • Proceedings of the Korean Institute of Building Construction Conference
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    • 2022.11a
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    • pp.71-72
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    • 2022
  • In this paper, the performance evaluation of the vibration damping ratio according to the polymer mixing ratio of the polymer modified mortar used as the floor finishing material of the apartment building structure was evaluated. To compare the vibration damping rate, ordinary potland cement (OPC) mortar and polymer modified mortar (PMM) were prepared. In addition, the mixed polymer was mixed with Styrene Butadiene Rubber (SBR) liquid polymer with a solid content of about 49%. Accordingly, the W/C of the test specimen was adjusted and compounded, and the experiment was conducted by mixing 5 types of the test specimen: OPC-60, PMM-5%, PMM-10%, PMM-15%, and PMM-20%. In addition, in order to adjust the W/C of the specimen, the fluidity of each specimen was set as 210 (±5) mm. The specimens measured density and flow in fresh mortar and after curing for 28 days, flexural strength, compressive strength and ultrasonic pulse were measured. The attenuation rate was shown. The experimental results showed that the density increased according to the mixing of the polymer, the flexural strength increased as the mixing rate of the polymer increased, and the compressive strength was decreased. In addition, it was shown that the vibration damping rate increases with the increase in the amount of polymer incorporated.

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The Linear Stability Derivatives by the Transient Maneuvering Method (과도응답법(過渡應答法)을 이용한 조종미계수(操縱微係數)의 추정(推定)에 관한 연구(硏究))

  • Seung-Keon,Lee
    • Bulletin of the Society of Naval Architects of Korea
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    • v.27 no.3
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    • pp.31-37
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    • 1990
  • To obtain the values of linear stability derivatives, both analytical and experimental methods are now proposed and in use. The experimental method is well known as the planar motion mechanism(PMM) test. Its concept is to drive the model with a prescrived frequency and amplitude of the motion and pick up the hydrodynamic forces. But this kind of method is inconvenient in case we want to know the stability derivatives in wider range of the frequencies. So a different method is attempted that with one test run, we can get the derivatives in wider range of the frequencies. This technique forces the impulsive motion on the model, using the power of the oil pressure pump. This kind of method was originated by Scragg, C.A., Cummins, W.E, or Frank, T., This resarch is a further development of such preceding works. Todd's series 60(Cb=0.7) 2.00M model is chosen for the test and the results are compared with Van Leeuwen's famous PMM test results.

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Patterns of Perimenstrual Symptoms and Related Dietary Factors to Premenstrual Syndromes (월경전후기증상의 유형과 월경전증상 관련식이요인)

  • Kim, Hae-Won
    • Women's Health Nursing
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    • v.10 no.2
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    • pp.162-170
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    • 2004
  • Purpose: The purpose of this study was to differentiate between women with three perimenstrual symptom severity patterns : premenstrual syndrome(PMS), premenstrual magnification(PMM), and low symptom(LS), and to explore the related dietary factors to premenstrual symptoms. Method: Women were asked to keep a diary record of perimenstrual symptoms and food intake for 50 days. Result: Symptom patterns were defined for 26 among 38 women ; Eight(21.1%) demonstrated a PMS pattern, three(7.9%) demonstrated a PMM pattern, and fifteen(39.5%) exhibited a LS pattern. There were significant differences in symptom scores during the premenstrual phase($x^2=19.30$, p=.000), menstrual phase($x^2=13.32$, p=.001), and post menstrual phase($x^2=9.93$, p=.007) for three groups. Protein, vit E, vit C, niacin, folic acid, and phosphorus in the premenstrual phase, and energy, and vit B6 in the menstrual period were significantly different between the three groups. Among dietary compositions, amino acids, lipids, fatty acids, saturated fatty acids, natrium, vit B6, niacin, and vit E were negatively related to PMS symptoms. Conclusion: Pattern of perimenstrual symptoms should be differentiated for individualized PMS management. As a more efficient diet assessment for PMS women, randomized nutritional analysis during the 3 phases of the menstrual cycle should be done and a replication study is necessary with a larger sample.

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Identification of Tetrachloroethylene Sorption Behaviors in Natural Sorbents Via Sorption Models

  • Al Masud, Md Abdullah;Choi, Jiyeon;Shin, Won Sik
    • Journal of Soil and Groundwater Environment
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    • v.27 no.6
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    • pp.47-57
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    • 2022
  • A number of different methods have been used for modeling the sorption of volatile organic chlorinated compounds such as tetrachloroethylene/perchloroethylene (PCE). In this study, PCE was adsorbed in several natural sorbents, i.e., Pahokee peat, vermicompost, BionSoil®, and natural soil, in the batch experiments. Several sorption models such as linear, Freundlich, solubility-normalized Freundlich model, and Polanyi-Manes model (PMM) were used to analyze sorption isotherms. The relationship between sorption model parameters, organic carbon content (foc), and elemental C/N ratio was studied. The organic carbon normalized partition coefficient values (log Koc = 1.50-3.13) in four different sorbents were less than the logarithm of the octanol-water partition coefficient (log Kow = 3.40) of PCE due to high organic carbon contents. The log Koc decreased linearly with log foc and log C/N ratio, but increased linearly with log O/C, log H/C, and log (N+O)/C ratio. Both log KF,oc or log KF,oc decreased linearly with log foc (R2 = 0.88-0.92) and log C/N ratio (R2 = 0.57-0.76), but increased linearly with log (N+O)/C (R2 = 0.93-0.95). The log qmax,oc decreased linearly as log foc and log C/N increased, whereas it increased with log O/C, log H/C and log (N+O)/C ratios. The log qmax,oc increased linearly with (N+O)/C indicating a strong dependence of qmax,oc on the polarity index. The results showed that PCE sorption behaviors were strongly correlated with the physicochemical properties of soil organic matter (SOM).

Rapid and Specific Detection of Virulent V. vulnificus in Tidal Flat Sediments (갯벌 퇴적물내 병원성 Vibrio vulnificus의 신속하고 특이적인 검출)

  • Byun Ki-Deuk;Lee Jung-Hyun;Lee Kye-Joon;Kim Sang-Jin
    • Korean Journal of Microbiology
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    • v.41 no.3
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    • pp.168-176
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    • 2005
  • Vibrio vulnificus, one of the marine bacterial pathogens causing septicemia, was detected using molecular methods, namely, PCR and/or Southern hybridization, and real-time PCR. Extracted and purified total DNAs by using commercial kits were used as templates for PCR. Multiplex-PCR was conducted by employing three sets of primers for the genes, hemolysin (vvhA), phosphomannomutase (pmm), and metalloprotease (vvpE), for V vulnificus virulence. The presence of DMSO ($5\%$) and BSA ($0.1\%$) in PCR reaction mixture improved a detection efficiency by higher PCR band intensities. TaqMan real-time PCR was carried out by using gene segment of vvhA as a target. Detection limit of PCR/Southern hybridization without enrichments was to be around $10^2\;cells\;g^{-1}$ of sample. However, those three methods using the enrichment at $35^{\circ}C$ in APW showed high sensitivity ($2\~10\;cells\;g^{-1}$ of sediments). Highly sensitive detection of V vulnificus by real-time PCR was achieved within $5\~6$ hr, whereas the detection by PCR/Southern hybridization required about 36 hr. Thus, it was evident that real-time PCR is the most rapid and efficient method for detecting V vulnificus in tidal flat sediments.

Single and Binary Competitive Sorption of Phenanthrene and Pyrene in Natural and Synthetic Sorbents

  • Masud, Md Abdullah Al;Shin, Won Sik
    • Journal of Soil and Groundwater Environment
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    • v.27 no.6
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    • pp.11-21
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    • 2022
  • Sorption of phenanthrene (PHE) and pyrene (PYR) in several sorbents, i.e., natural soil, BionSoil®, Pahokee peat, vermicompost and Devonian Ohio Shale and a surfactant (hexadecyltrimethyl ammonium chloride)-modified montmorillonite (HDTMA-M) were investigated. Pyrene exhibited higher sorption tendency than phenanthrene, as predicted by its higher octanol to water partition coefficient (Kow). Several sorption models: linear, Freundlich, solubility-normalized Freundlich model, and Polanyi-Manes model (PMM) were used to analyze sorption isotherms. Linear isotherms were observed for natural soil, BionSoil®, Pahokee peat, vermicompost, while nonlinear Freundlich isotherms fitted for Ohio shale and HDTMA-M. The relationship between sorption model parameters, organic carbon content (foc), and elemental C/N ratio was studied. In the binary competitive sorption of phenanthrene and pyrene in natural soil, competition between the solutes caused reduction in the sorption of each solute compared with that in the single-solute system. The ideal adsorbed solution theory (IAST) coupled with the single-solute Freundlich model was not successful in describing the binary competitive sorption equilibria. This was due to the inherent nature of linear sorption of phenanthrene and pyrene in natural soil. The result indicates that the applicability of IAST for the prediction of binary competitive sorption is limited when the sorption isotherms are inherently linear.