Rapid and Specific Detection of Virulent V. vulnificus in Tidal Flat Sediments |
Byun Ki-Deuk
(School of Biological Science, Seoul National University)
Lee Jung-Hyun (Marine Biotechnology Center, Korea Ocean Research and Development Institute) Lee Kye-Joon (School of Biological Science, Seoul National University) Kim Sang-Jin (Marine Biotechnology Center, Korea Ocean Research and Development Institute) |
1 | 이정현, 신현희, 이홍금, 권개경, 김상진. 1998. 해양퇴적물의 핵산추출물에서 humic substances의 효율적인 제거 방법. 한국미생물학회지 34, 132-136 |
2 | Brauns, L.A., M.C. Hudson, and J.D. Oliver. 1991. Use of the polymerase chain reaction in detection of culturable and nonculturable V. vulnificus cells. Appl. Environ. Microbiol. 57, 2651-2655 PUBMED |
3 | Campbell, M.S. and A.C. Wright. 2003. Real-time PCR analysis of V. vulnificus from oysters. Appl. Environ. Microbiol. 69, 7137-7144 DOI ScienceOn |
4 | Chung, M.S., B.M. Rim, T.B. Uhm, and M.K. Park. 1997. A detection method for V. vulnificus using monoclonal antibodies. J. Microbiol. 35, 87-91 |
5 | DePaola, A., G.M. Capers, and D. Alexander. 1994. Densities of V. vulnificus in the intestines of fish from the U.S. Gulf coast. Appl. Environ. Microbiol. 60, 984-988 PUBMED |
6 | Jackson, J.K., R.L. Murphree, and M.L. Tamplin. 1997. Evidence that mortality from V. vulnificus infection results from single strains among heterogeneous populations in shellfish. J. Clin. Microbiol. 35, 2098-2101 PUBMED |
7 | Jeong, K.C., H.S. Jeong, J.H. Rhee, S.E. Lee, S.S. Chung, A.M. Starks, G.M. Escudero, P.A. Gulig, and S.H. Choi. 2000. Construction and phenotypic evaluation of a Vibrio vulnificus vvpE mutant for elastolytic protease. Infect. Immun. 68, 5096-5106 DOI ScienceOn |
8 | Lee, S.E., S.Y. Kim, S.J. Kim, H.S. Kim, J.H. Shin, S.H. Choi, S.S. Chung, and J.H. Rhee. 1998. Direct identification of V. vulnificusin clinical specimens by nested PCR. J. Clin. Microbiol. 36, 2887-2892 PUBMED |
9 | Montanari, M.P., C. Pruzzo, L. Pane, and R.R. Colwell. 1999. Vibrios associated with plankton in a coastal zone of the Adriatic Sea (Italy). FEMS Microbiol. Ecol. 29, 241-247 DOI ScienceOn |
10 | Nogva, H.K., K. Rudi, K. Naterstad, A. Holck, and D. Lillehaug. 2000. Application of 5'-nuclease PCR assay for quantitative detection of Listeria monocytogenes in pure cultures, water, skim milk, and unpasteurized whole milk. Appl. Environ. Microbiol. 66, 4266-4271 DOI ScienceOn |
11 | Stavric, S. and B. Buchanan. 1995. Laboratory procedure MFLP-73 (The isolation and enumeration of Vibrio vulnificus from fish and seafoods). Research Division, Bureau of Microbial Hazards, Food Directorate, Health Canada |
12 | Kuske, C.R., K.L. Banton, D.L. Adorada, P.C. Stark, K.K. Hill, and P.J. Jackson. 1998. Small-scale DNA sample preparation method for field PCR detection of microbial cells and spores in soil. Appl. Environ. Microbiol. 64, 2463-2472 PUBMED |
13 | Brasher, C.W., A. DePaola, D.D. Jones, and A.K. Bej. 1998. Detection of microbial pathogens in shellfish with multiplex PCR. Curr. Microbiol. 37, 101-107 DOI ScienceOn |
14 | Wilson, I.G. 1997. Inhibition and facilitation of nucleic acid amplification. Appl. Environ. Microbiol. 63, 3741-3751 PUBMED |
15 | Lee, J.H., K.H. Lee, and S.H. Choi. 2001. Enumeration of V. vulnificus in natural samples by colony blot hybridization. J. Microbiol. Biotechnol. 11, 302-309 |
16 | Tamplin, M.L., A.L. Martin, A.D. Ruple, D.W. Cook, and C.W. Kasper. 1991. Enzyme immunoassay for identification of V. vulnificus in seawater, sediment, and oysters. Appl. Environ. Microbiol. 57, 1235-1240 PUBMED |
17 | Chen, S., A. Yee, M. Griffiths, C. Larkin, C.T. Yamashiro, R. Behari, C. Paszko-Kolva, K. Rahn, and S.A. De Grandis. 1997. The evaluation of fluorogenic polymerase chain reaction assay for the detection of Salmonella species in food commodities. Int.Food Microbiol. 35, 239-250 DOI ScienceOn |
18 | Lee, Y.K., H.W. Kim, C.L. Liu, and H.K. Lee. 2003. A simple method for DNA extraction from marine bacteria that produce extracellular materials. J. Microbiol. Methods 52, 245- 250 DOI ScienceOn |
19 | Norton, D-M., and C.A. Batt. 1999. Detection of viable Listeriamonocytogenes with a 5' nuclease PCR assay. Appl. Environ. Microbiol. 65, 2122-2127 PUBMED |
20 | Coleman, S.S. and J.D. Oliver. 1996. Optimization of conditions for the polymerase chain reaction amplification of DNA from culturable and nonculturable cells of V. vulnificus. FEMS Microbiol. Ecol. 19, 127-132 DOI ScienceOn |
21 | Lee, J.Y. and S.H. Choi. 1995. Rapid and direct detection of V. vulnificus in small octopus (Octopus variabilis) using polymerase chain reaction. J. Microbiol. Biotechnol. 5, 181-187 |
22 | Tsai, Y.L. and B.H. Olson. 1992b. Rapid method for separation of bacterial DNA from humic substances in sediments for polymerase chain reaction. Appl. Environ. Microbiol. 58, 2292-2295 PUBMED |
23 | Vishnubhatla, A., D.Y.C. Fung, R.D. Oberst, M.P. Hays, T.G. Nagaraja, and S.J.A. Flood. 2000. Rapid 5-nuclease (TaqMan) assay for detection of virulent strains of Yersinia enterocolitica. Appl. Environ. Microbiol. 66, 4131-4135 DOI ScienceOn |
24 | Koetsier, P.A., J. Schorr, and W. Doerfler. 1993. A rapid optimized protocol for downward alkaline Southern blotting of DNA. Biotechniques 15, 260-262 PUBMED |
25 | Lyon, W.J. 2001. TaqMan PCR for detection of Vibrio cholerae O1, O139, Non-O1, and Non-O139 in pure cultures, raw oysters, and synthetic seawater. Appl. Environ. Microbiol. 67, 4685-4693 DOI PUBMED ScienceOn |
26 | Oliver, J.D., R.A. Warner, and D.R. Cleland. 1982. Distribution and ecology of V. vulnificus and other lactose-fermenting marine Vibrios in coastal waters of the Southeastern United States. Appl. Environ. Microbiol. 44, 1404-1414 PUBMED |
27 | 고정운, 박석돈. 1987. 각종 배지에서 Vibrio vulnificus의 배양상의 특성. 대한피부과학회지 25. 193-198 |
28 | Gonzalez, S.F., M.J. Krug, M.E. Nielsen, Y. Santos, and D.R. Call. 2004. Simultaneous detection of marine fish pathogens by using multiplex PCR and a DNA microarray. J. Clin. Microbiol. 42, 1414-1419 DOI ScienceOn |
29 | 박석돈. 1993. V. vulnificus 감염증. 대한피부과학회지 31, 289-304 |
30 | Berthelet, M., L.G. Whyte, and C.W. Greer. 1996. Rapid, direct extraction of DNA from soils for PCR analysis using polyvinylpolypyrrolidone spin columns. FEMS Microbiol. Lett. 138, 17-22 DOI ScienceOn |
31 | Weichart, D. and S. Kjelleberg. 1996. Stress resistance and recovery potential of culturable and viable but nonculturable cells of V. vulnificus. Microbiology 142, 845-853 DOI ScienceOn |
32 | 국립보건원. 2002. 법정전염병 실험실 진단지침 (Guidelines for Laboratory Diagnosis of Statutory Communicable Diseases) |
33 | Linder, K. and J.D. Oliver. 1989. Membrane fatty acid and virulence changes in the viable but nonculturable state of V. vulnificus. Appl. Environ. Microbiol. 55, 2837-2842 PUBMED |
34 | Tsai, Y.L. and B.H. Olson. 1992a. Detection of low numbers of bacterial cells in soils and sediments by polymerase chain reaction. Appl. Environ. Microbiol. 58, 754-757 PUBMED |
35 | Marco-Noales, E., E.G. Biosca, and C. Amaro. 1999. Effects of salinity and temperature on long-term survival of the eel pathogen V. vulnificus biotype 2 (serovar E). Appl. Environ. Microbiol. 65, 1117-1126 PUBMED |
36 | Wang, H.Y. and G-H. Lee. 2003. Rapid identification of V. vulnificus in seawater by real-time quantitative TaqMan PCR. J. Microbiol. 41, 320-326 |
37 | 박석돈, 손동선, 고정운. 1986. 수소이온 농도가 V. vulnificus 성장에 미치는 영향. 대한 피부과학회지 24, 354-357 |
38 | Weichart, D., D. McDougald, D. Jacobs, and S. Kjelleberg. 1997. In situ analysis of nucleic acids in cold-induced nonculturable V. vulnificus. Appl. Environ. Microbiol. 63, 2754-2758 PUBMED |
39 | Bassler, H.A., S.J.A. Flood, K.J. Livak, J. Marmaro, R. Knorr, and C.A. Batt. 1995. Use of a fluorogenic probe in a PCR-based assay for the detection of Listeria monocytogenes. Appl. Environ. Microbiol. 61, 3724-3728 PUBMED |
40 | Yang, H.C., S.S. Hong, K.H. Kim, S.H. Choi, and H.J. Chung. 1999. Distribution of V. vulnificus in Chonnam coastal area. Korean J. Appl. Microbiol. Biotechnol. 27, 70-74 |
41 | Panicker, G., M.L. Myers, and A.K. Bej. 2004. Rapid detection of V. vulnificus in shellfish and Gulf of Mexico water by real-time PCR. Appl. Environ. Microbiol. 70, 498-507 DOI ScienceOn |
42 | Tsai, Y.L. and B.H. Olson. 1991. Rapid method for direct extraction of DNA from soil and sediments. Appl. Environ. Microbiol. 57, 1070-1074 PUBMED |
43 | Farmer, J.J. III. 1979. Vibrio (Beneckea) vulnificus, the bacterium associated with sepsis, septicemia, and the sea. Lancet 2, 903 PUBMED |