• 제목/요약/키워드: phenotypic change

검색결과 53건 처리시간 0.024초

Estimation of Genetic and Phenotypic Covariance Functions for Body Weight as Longitudinal Data of SD-II Swine Line

  • Liu, Wenzhong;Cao, Guoqing;Zhou, Zhongxiao;Zhang, Guixian
    • Asian-Australasian Journal of Animal Sciences
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    • 제15권5호
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    • pp.622-626
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    • 2002
  • Growth records over six generations of 686 pigs in SD-II Swine Line were used to estimate the genetic and phenotypic covariance functions for body weight as longitudinal data. A random regression model with Legendre polynomials of age as independent variables was used to estimate the (co)variances among the regression coefficients, thus the coefficients of genetic and permanent environmental covariance functions by restricted maximum likelihood employing the average information algorithm. The results showed that, using litter effect as additional random effect, a reduced order of fit did not describe the data adequately. For all five orders of fit, however, the change trends of genetic and phenotypic (co)variances were very similar from ${\kappa}$=3 onwards.

Some Observations on Phenotypic Variations in Mulberry Silkworm, Bombyx mori L.

  • Patil, Rajashekhargouda R.;Ankad, Ganga;Klusugal, Sunita
    • International Journal of Industrial Entomology and Biomaterials
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    • 제9권2호
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    • pp.261-264
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    • 2004
  • Kolar gold (PM${\times}$CSR2) is the most popular cross breed of India, especially in Karnataka. During January - February 2004 we observed several phenotypic variations leading to poor survival. Though occurrence of morphologically abnormal individuals is common, the extent of occurrence in the present report was on the higher side (upto 6 percent). It is unwarranted and not desirable in commercial silkworm rearing. The variations exhibited might be due to change in the environmental conditions like incubation temperature during embryonic stage or spontaneous mutation resulting out of environmental stress.

Dendropanax morbifera Extract Inhibits Intimal Hyperplasia in Balloon-Injured Rat Carotid Arteries by Modulating Phenotypic Changes in Vascular Smooth Muscle Cells

  • Lim, Leejin;Jo, Juyeong;Yoon, Sang Pil;Jang, Inyoub;Ki, Young-Jae;Choi, Dong-Hyun;Song, Heesang
    • Natural Product Sciences
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    • 제26권1호
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    • pp.71-78
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    • 2020
  • The plant Dendropanax morbifera Léveille is effective folk medicines for the treatment of several conditions, such as infectious diseases, skin diseases, and other illnesses. Although the inhibitory effects of D. morbifera on the proliferation and migration of vascular smooth muscle cells (VSMCs) have been shown in our previous study, its effects in vivo remain to be elucidated. In this study, we aimed to investigate the protective effects of the extracts from D. morbifera (EDM) on neointimal hyperplasia of rat carotid artery and explore the underlying mechanisms. We observed that the ratio of intima to media thickness (I/M) was significantly decreased in the EDM-treated groups by ~80% compared to that of the control. The expression of Ki-67 and proliferating cell nuclear antigen was decreased by ~70% in the EDM-treated groups compared to that of the control. In addition, matrix metalloproteinase (MMP)2 and MMP9 significantly reduced in the neointimal layer of the EDM-treated groups. Moreover, the decreased levels of contractile phenotypic markers of VSMCs, such as α-smooth muscle actin, myocardin, and smooth muscle-myosin heavy chain, were successfully restored by EDM treatment. Furthermore, the levels of synthetic phenotypic markers, cellular retinal binding protein 1 and connexin 43 were also restored to normal levels. These results suggest that EDM inhibits vascular neointimal hyperplasia induced by balloon injury in rats via phenotypic modulation of VSMCs. Therefore, EDM may be a potential drug candidate for the prevention of restenosis.

한국 재래닭의 유전적 및 표현형적 변화추세의 추정

  • 상병돈;최철환;김학규;나재천;장병귀;김시동;이상진;유동조;상병찬
    • 한국가금학회:학술대회논문집
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    • 한국가금학회 2003년도 제20차 정기총회 및 학술발표회
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    • pp.113-114
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    • 2003
  • 세대당 유전적 및 표현형적 변화량의 범위는 적갈색, 황갈색, 회갈색, 흑색 및 백색계통에서 150일령 체중은 -3.66 ∼ -8.99 및 -27.07 ∼ -63.61 g이었고, 270일령 체중은 -2.89 ∼ -9.69 및 7.39 ∼ -27.46 g 이었으며, 시산일령은 -0.31 ∼ -0.57 및 -0.23 ∼ -6.67일이었다. 시산난중은 -0.02 ∼ -0.06 및 0.65 ∼ 0.26 g이었고, 270일령 난중은 0.11 ∼ 0.15 및 0.35 ∼ 0.06 g이었으며, 270일령 산란수는 0.63 ∼ 0.35 및 1.62 ∼ 0.01개였다. 이로써 체중과 시산일령은 낮아지는 추세를 보였으며 270일령 난중과 산란수는 증가하는 추세를 보였다.

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상수 각형질 상호간의 표현형상관과 유전상관 (Phenotypic and Genotypic Correlations between Some Characters of Mulberry Trees)

  • 장권열;한경수;민병열
    • 한국잠사곤충학회지
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    • 12호
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    • pp.1-4
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    • 1970
  • 뽕나무의 정엽중 즉 수량을 예측하고 수량과 제형질과의 관계를 알고자 우리나라 상수주요품종 4품종을 재료로 상수의 8개형질상호간의 유전상관, 표현형상관 그리고 환경상관을 계산한바 그 결과를 요약하면 다음과 같다. 1. 각형질상호간의 표현형공분산, 유전공분산 그리고 환경공분산을 계산한 바 제1표와 같이 표현형공분산은 유전공분산의 값과 근사하나 다소 높고 환경공분산의 값은 그 변동이 심하다. 2. 각형질상호간의 유전상관, 표현형관계 그리고 환경상관 등은 계산한바 제2표와 같이 유전상관은 표현형상관보다 그 값이 높고 지조장과 주당지수간, 주당지수와 지총중간에 1이상의 이상치가 보였다. 3. 지조직경과 제형질상호간에는 어느 경우에 있어서도 상관의 정도가 낮고, 정엽중 즉 수량과 제형질간의 상관관계를 본바 수량과 지조직경간에는 그값이 낮으나 기타 제형질은 수량과 높은 상관관계를 보였다. 뽕나무의 제형질중 예취전에 측정할 수 있는 지조장, 절간수, 지조직경, 주당지수의 4개형질이 수량의 예측이나 선발대상형질로서 중요한 형질이나 본실험의 결과 지조직경은 수량과 상관의 정도가 낮고, 주당지수는 전보의 결과에서 유전력이 낮았으므로 지금까지의 결과로는 지조장과 절간수가 더욱 중요한 형질로서 취급하여야 할 것으로 믿으며 이들 형질들과 수량과의 직접효과와 간접효과를 구명하여 보는 것이 앞으로 남은 한 과제가 될 수 있을 것으로 믿는다.

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Role of Cordycepin and Adenosine on the Phenotypic Switch of Macrophages via Induced Anti-inflammatory Cytokines

  • Shin, Seul-Mee;Moon, Sun-Hee;Park, Yoon-Hee;Kwon, Jeong-Hak;Lee, Seung-Jeong;Lee, Chong-Kil;Cho, Kyung-Hae;Kim, Kyung-Jae
    • IMMUNE NETWORK
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    • 제9권6호
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    • pp.255-264
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    • 2009
  • Background: Chronic low grade inflammation is closely linked to type II diabetes, obesity, and atherosclerosis. Macrophages play a key role in the regulation of pro- or anti-inflammatory actions at the lesion sites of disease. Components of cordyceps militaris, cordycepin and adenosine, have been used for the modulation of inflammatory diseases. The effects of cordycepin in the modulation of macrophages have yet to be be elucidated. We investigated the effects of cordycepin and adenosine on the morphological changes of macrophages under the inflammatory condition of LPS and an anti-inflammatory condition involving high concentrations of adenosine. Methods: We confirmed the mRNA levels of the M1/M2 cytokine genes through RT-PCR and morphological change. Results: LPS-activated macrophages returned to their inactivated original shape, i.e., they looked like naive macrophages, through the treatment with high concentrations of cordycepin ($40{\mu}g/ml$). LPS and adenosine activated macrophages also returned to their original inactivated shapes after cordycepin treatment; however, at relatively higher levels of cordycepin than adenosine. This change did not occur with relatively low concentrations of cordycepin. Adenosine down-regulated the gene expression of M1 cytokines (IL-$1{\beta}$, TNF-${\alpha}$) and chemokines (CX3CR1, RANTES), such as cordycepin. Additionally, M2 cytokines (IL-10, IL-1ra, TGF-${\beta}$) were up-regulated by both cordycepin and adenosine. Conclusion: Based on these observations, both cordycepin and adenosine regulated the phenotypic switch on macrophages and suggested that cordycepin and adenosine may potentially be used as immunomodulatory agents in the treatment of inflammatory disease.

Genetics of Residual Feed Intake in Cattle and Pigs: A Review

  • Hoque, M.A.;Suzuki, K.
    • Asian-Australasian Journal of Animal Sciences
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    • 제22권5호
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    • pp.747-755
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    • 2009
  • The feed resource for animals is a major cost determinant for profitability in livestock production enterprises, and thus any effort at improving the efficiency of feed use will help to reduce feed cost. Feed conversion ratio, expressed as feed inputs per unit output, is a traditional measure of efficiency that has significant phenotypic and genetic correlations with feed intake and growth traits. The use of ratio traits for genetic selection may cause problems associated with prediction of change in the component traits in future generations. Residual feed intake, a linear index, is a trait derived from the difference between actual feed intake and that predicted on the basis of the requirements for maintenance of body weight and production. Considerable genetic variation exists in residual feed intake for cattle and pigs, which should respond to selection. Phenotypic independence of phenotypic residual feed intake with body weight and weight gain can be obligatory. Genetic residual feed intake is genetically independent of its component traits (body weight and weight gain). Genetic correlations of residual feed intake with daily feed intake and feed conversion efficiency have been strong and positive in both cattle and pigs. Residual feed intake is favorably genetically correlated with eye muscle area and carcass weight in cattle and with eye muscle area and backfat in pigs. Selection to reduce residual feed intake (excessive intake of feed) will improve the efficiency of feed and most of the economically important carcass traits in cattle and pigs. Therefore, residual feed intake can be used to replace traditional feed conversion ratio as a selection criterion of feed efficiency in breeding programs. However, further studies are required on the variation of residual feed intake during different developmental stage of production.

Interplay between Epigenetics and Genetics in Cancer

  • Choi, Jae Duk;Lee, Jong-Soo
    • Genomics & Informatics
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    • 제11권4호
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    • pp.164-173
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    • 2013
  • Genomic instability, which occurs through both genetic mechanisms (underlying inheritable phenotypic variations caused by DNA sequence-dependent alterations, such as mutation, deletion, insertion, inversion, translocation, and chromosomal aneuploidy) and epigenomic aberrations (underlying inheritable phenotypic variations caused by DNA sequence-independent alterations caused by a change of chromatin structure, such as DNA methylation and histone modifications), is known to promote tumorigenesis and tumor progression. Mechanisms involve both genomic instability and epigenomic aberrations that lose or gain the function of genes that impinge on tumor suppression/prevention or oncogenesis. Growing evidence points to an epigenome-wide disruption that involves large-scale DNA hypomethylation but specific hyper-methylation of tumor suppressor genes, large blocks of aberrant histone modifications, and abnormal miRNA expression profile. Emerging molecular details regarding the modulation of these epigenetic events in cancer are used to illustrate the alterations of epigenetic molecules, and their consequent malfunctions could contribute to cancer biology. More recently, intriguing evidence supporting that genetic and epigenetic mechanisms are not separate events in cancer has been emerging; they intertwine and take advantage of each other during tumorigenesis. In addition, we discuss the collusion between epigenetics and genetics mediated by heterochromatin protein 1, a major component of heterochromatin, in order to maintain genome integrity.

치아우식증 유발 균주에 대한 패러다임의 변화: 생태학적 관점 (Change of Paradigms in Caries-Associated Bacteria in the Caries Process: Ecological Perspectives)

  • 김희은
    • 치위생과학회지
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    • 제14권2호
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    • pp.87-93
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    • 2014
  • Dental plaque resides passively at a site and makes an active contribution to the maintenance of health. The bacterial composition of plaque remains relatively stable despite regular exposure to minor environmental stress. This stability, homeostasis is due to a dynamic balance of microbial interactions. However, the homeostasis can break down, leading to shifts in the balance of the microflora. This change can be a sign of initial dental caries. It is proposed that disease can be prevented or treated not only by targeting the putative pathogens but also by interfering with the processes that drive the breakdown in homeostasis. It is essential to understand the plaque as a mixed species biofilm. In this essay I reviewed an extension of the caries ecological hypothesis to explain the relation between dynamic changes in the phenotypic/genotypic properties of plaque bacteria and the demineralization and remineralization balance of the dental caries process. We will have the strategies to impact significantly on clinical practice as understanding dental biofilm.

Identification of DNA Variations Using AFLP and SSR Markers in Soybean Somaclonal Variants

  • Lee, Suk-Ha;Jung, Hyun-Soo;Kyujung Van;Kim, Moon-Young
    • 한국작물학회지
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    • 제49권1호
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    • pp.69-72
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    • 2004
  • Somaclonal variation, defined as phenotypic and genetic variations among regenerated plants from a parental plant, could be caused by changes in chromosome structure, single gene mutation, cytoplasm genetic mutation, insertion of transposable elements, and DNA methylation during plant regeneration. The objective of this study was to evaluate DNA variations among somaclonal variants from the cotyledonary node culture in soybean. A total of 61 soybean somaclones including seven $\textrm{R}_1$ lines and seven $\textrm{R}_2$ lines from Iksannamulkong as well as 27 $\textrm{R}_1$ lines and 20 $\textrm{R}_2$ lines from Jinju 1 were regenerated by organogenesis from the soybean cotyledonary node culture system. Field evaluation revealed no phenotypic difference in major agronomic traits between somaclonal variants and their wild types. AFLP and SSR analyses were performed to detect variations at the DNA level among somaclonal variants of two varieties. Based on AFLP analysis using 36 primer sets, 17 of 892 bands were polymorphic between Iksannamulkong and its somaclonal variants and 11 of 887 bands were polymorphic between Jinju 1 and its somaclonal variants, indicating the presence of DNA sequence change during plant regeneration. Using 36 SSR markers, two polymorphic SSR markers were detected between Iksannamulkong and its somaclonal variants. Sequence comparison amplified with the primers flanking Satt545 showed four additional stretches of ATT repeat in the variant. This suggests that variation at the DNA level between somaclonal variants and their wild types could provide basis for inducing mutation via plant regeneration and broadening crop genetic diversity.