• 제목/요약/키워드: pcDNA3.1

검색결과 114건 처리시간 0.032초

16S rDNA-ARDRA법을 이용한 소나무림과 상수리나무림 토양 내 VBNC 세균군집의 계통학적 특성 비교 (Comparison of Phylogenetic Characteristics of Viable but Non-Culturable (VBNC) Bacterial Populations in the Pine and Quercus Forest Soil by 16S rDNA-ARDRA)

  • 한송이;김윤지;황경숙
    • 미생물학회지
    • /
    • 제42권2호
    • /
    • pp.116-124
    • /
    • 2006
  • 직접 생균수 측정법(DVC)과 평판계수법(PC)을 이용하여 소나무림과 상수리나무림 토양에 분포하는 세균군집의 정량적 평가를 실시한 결과, DVC법에 의해 계수된 생균수에 대해 평판법에 의해 계수된 생균수 1% 미만으로 나타났다. 이상의 결과로부터 산림토양 내에 평판배양법으로는 배양이 곤란한 난배양성(viable but non culturable; VBNC) 세균이 99% 이상 존재해 있는 것으로 판단되었다. 이들 VBNC 세균의 군집구조 해석을 위하여 토양으로부터 직접 DNA를 추출하고 16S rDNA-ARDRA 분석을 통하여 계통학적 특성을 검토하였다. 소나무림과 삼수리나무림 토양으로부터 각각 111 clones, 108 clones을 획득하고 HaeIII 절편양상에 따라 30 groups과 26 groups의 ARDRA group으로 분류하였다. 각 ARDRA group으로부터 대표 clone을 선발하여 16S rDNA 염기서 열을 결정한 결과, 소나무림 토양의 경우 ${\alpha}$-proteobacteria (12 clones), ${\gamma}$-proteobacteria (3 clones), ${\delta}$-proteobncteria (1clone), Flexibacter/Cytophaga (1 clone), Actinobacteria (4 clones), Acidobacteria (4 clones), 그리고 Planctomycetes (5 clone)의 7개의 계통군이 확인되었으며, 상수리나무림 토양에서는 ${\alpha}$-proteobacteria (4 clones), ${\gamma}$-proteobacteria (2 clones), Actinobacteria (10 clones), Acidobacteria (8 clones), Planctomycetes (1 clone), 그리고 Verrucomicrobia (1clone)로 6개의 다양한 계통군이 확인되었다. 이상, 소나무림과 상수리나무림 토양 내에 존재하는 99% 이상의 VBNC 세균군집의 대부분은 미배양성 혹은 미동정균으로 계통학적으로 다양한 미지의 미생물로 구성되어 있음이 확인되었다.

형질전환 토마토에서 Antisense Polygalacturonase 유전자의 발현 (Expression of Antisense Polygalacturonase Gene in Transgenic Tomato)

  • 김영미;김용환;이성갑;임명호;송경수
    • 식물조직배양학회지
    • /
    • 제22권6호
    • /
    • pp.351-355
    • /
    • 1995
  • 국내 재배종 토마토 서광 품종으로부터 분리한 Polygalacturonase 유전자(PG2)의 3'측 1.1 kb cDNA 단편을 식물 형질전환용 운반체에 antisense 방향으로 삽입한 후 자엽을 이용하여 토마토내 도입하여 형질전환 토마토를 획득하였다. 형질전환 토마토(T$^{0}$ )를 도입시켜 그 종자를 1 mg/mL 농도의 kanamycin 함유 MS 배지에서 발아시켜 분리 집단 중에서 T$_1$9 식물체를 얻었다. T$_1$9의 Genomic Southern blot 분석 결과, antisense PG 유전자 1개가 염색체 내로 삽입되었음을 확인하였고 RNA gel blot 분석으로 endogenous PG mRNA보다 antisense PG RNA가 강하게 발현됨을 확인하였다. T$_1$9 계통 10개체의 성숙 토마토 과피조직내의 PG 효소 활성도 4~60%까지 저해되었다.

  • PDF

Protective Effect of Schizonepeta tenuifolia Briquet Extracts on Oxidative DNA Damage in Human Leucocytes and on Hydrogen Peroxide-induced Cytotoxicity in PC12 Cells

  • Yoon, Mi-Young;Lee, Hyun-Jin;Lee, Bo-Bae;Lee, Sang-Myeon;Kim, Ju-Young;Kim, Yong-Seong;Park, Eun-Ju;Park, Hae-Ryong
    • Food Science and Biotechnology
    • /
    • 제16권5호
    • /
    • pp.858-862
    • /
    • 2007
  • The present study was conducted to examine the antioxidant activities and neuroprotective effects of methanolic extracts from Schizonepeta tenuifolia Briquet (STE). STE ($100\;{\mu}g/mL$) showed $43.33\;{\mu}M$ of total phenolic content, 64.43% of radical scavenging activity, and 0.157 of reducing power. In addition, the effect of STE on $H_2O_2$-induced DNA damage in human leucocytes was evaluated by the comet assay, where STE was a dose dependent inhibitor of DNA damage induced by $200{\mu}M$ of $H_2O_2$. The protective effect of STE against $H_2O_2$-induced oxidative damage on PC12 cells was investigated by an 3-[4,5-dimethylthiazol-2-yl]-2,5-diphenyl tetrazolium bromide (MTT) reduction assay and lactate dehydrogenase (LDH) release assays. After 2 hr of cell exposure to $H_2O_2\;(500\;{\mu}M)$, a marked reduction in cell survival was observed. However, this reduction was significantly prevented by $1-50\;{\mu}g/mL$ of STE. Therefore, these results suggest that STE could be a new antioxidant candidate against neuronal diseases.

OXIDATIVE DNA DAMAGE AND APOPTOSIS INDUCED BY TETRAHYDROPAPAVEROLINE IN PC12 CELLS

  • Shin, Mi-Hyun;Jang, Jung-Hee;Lee, Jeong-Sang;Surh, Young-Joan
    • 한국독성학회:학술대회논문집
    • /
    • 한국독성학회 2001년도 International Symposium on Dietary and Medicinal Antimutgens and Anticarcinogens
    • /
    • pp.114-114
    • /
    • 2001
  • Tetrahydropapaveroline (THP), a dopamine-derived 6, 7-dihydroxy-1-(3' ,4'-dihydroxybenzyl)-1,2,3,4-tetrahydroisoquinoline, has been suspected as a possible dopaminergic neurotoxin to elicit Parkinsonism. Autooxidation or enzymatic oxidation of THP and subsequent generation of reactive oxygen species (ROS) may contribute to the degeneration of dopaminergic neurons induced by this isoquinoline alkaloid.(omitted)

  • PDF

환소단이 영양혈청 결핍성 PC12 신경세포의 apoptosis에 미치는 영향 (Protective Effects of Hwansodan(Huanshao-dan) Water Extract in Serum Deprivation-induced Apoptosis of PC12 Cells)

  • 임준식;김명선;소홍섭;이지현;한상혁;허윤;박래길;문병순
    • 대한한의학회지
    • /
    • 제21권4호
    • /
    • pp.64-72
    • /
    • 2000
  • Objectives : This study was designed to investigate the neuroprotective effect of Hwansodan(Huanshao-dan) on the apoptosis induced by withdrawal of neurotrophic support. Methods : PCl2 pheochromocytoma cells have been used extensively as a model for studying the cellular and molecular effects of neuronal cells. The viability of cells was measured by MTT assay. We used DNA fragmentation and caspase 3-like protease activation assay. Results : The water extract of Hwansodan(Huanshao-dan) significantly showed protective effects on serum and glucose deprivation-induced apoptotic death. Hwansodan(Huanshao-dan) also prevents DNA fragmentation and caspase 3-like protease activation, representing typical neuronal apoptotic phenomena in PCl2 pheochromocytoma cells and induces tyrosine phosphorylation of proteins around 44 kDa, which was identified as ERK1 with electrophoretic gel mobility shift by Western blot. In addition, MAPK kinase(MEK) inhibitor PD98059 and Ras inactivator, ${\alpha}-hydroxyfarnesylphosphonic$ acid attenuated the neuroprotective effects of Hwansodan(Huanshao-dan) in serum-deprived PCl2 cells. Conclusions : These results indicate that Ras/MEK/ERK signaling pathway plays a key role in neuroprotective effects of Hwansodan(Huanshao-dan) in serum-deprived PCl2 cells. Taken together, we suggest the possibility that Hwansodan(Huanshao-dan) might provide a neurotrophic-like activity in PCl2 cells.

  • PDF

Antitumoral and Antioxidant Potential of Egyptian Propolis Against the PC3 Prostate Cancer Cell Line

  • Salim, Elsayed I;Abd El-Magid, Afaf D;Farara, Khalid M;Maria, Dina SM
    • Asian Pacific Journal of Cancer Prevention
    • /
    • 제16권17호
    • /
    • pp.7641-7651
    • /
    • 2015
  • It has been shown previously that nutritional supplements rich in polyphenolic compounds play a significant role in prostate cancer chemoprevention. Propolis is a natural, resinous hive product that has several pharmacological activities including antimicrobial, antioxidant, anti-inflammatory, and antitumoral activities. The aim of this study was to compare the cytotoxic, antioxidant and antitumoral activities of an ethanolic extract of Egyptian propolis (EEP) in vitro with an established chemotherapeutic drug such as doxorubicin (DOX), and the effects of their combination against the PC3 human prostate cancer cell line. Cellular viability and $IC_{50}$ levels with EEP, DOX and their (v/v) combination were detected by sulphorhodamine-B (SRB) assay after incubation of PC3 cells for 72h with different doses (0, 0.01, 0.1, 1, 10 and $100{\mu}g/ml$). Two selected doses of $IC_{50}$ and $IC_{25}$ were applied to cells for 24h for antitumor evaluation assay of treatment compounds. EEP and its (v/v) combination with DOX showed significant antitumor potential besides high antioxidant properties of superoxide dismutase (SOD), total antioxidant capacity (TAC), catalase (CAT), nitric oxide (NO) and reduced glutathione (GSH) levels when compared with the control untreated cells. DNA fragmentation assay and semi quantitative RT-PCR analyses for p53 and Bax genes showed that EEP activated cellular apoptosis and increased the mRNA expression levels more than other treatment. In conclusion, EEP alone or in combination with DOX at both doses used here showed greater antioxidant, antiproliferative and apoptotic effects against the PC3 cell lines as compared to treatment with DOX alone. Therefore, EEP could be considered as a promising candidate for prostate cancer chemotherapy.

인간 hnRNP A1 단백질에 포함된 RGG 상자의 기능 분석 (Analysis of the Role of RGG box of human hnRNP A1 protein)

  • 최미영
    • 한국산학기술학회논문지
    • /
    • 제18권12호
    • /
    • pp.575-580
    • /
    • 2017
  • 본 연구는 hnRNP A1 단백질에 포함되어 있는 RGG 상자가 이 단백질의 세포내 위치에 미치는 영향 및 이 단백질의 안정화에 미치는 영향을 분석하는 것을 목적으로 하며 2014년 10월부터 약 3년 동안 수행되었다. 이를 위해 먼저, RGG상자 내의 6개의 아르기닌을 라이신으로 돌연변이를 만든 다음 pcDNA1-HA-hnRNP A1(6R/K)를 재조합하였다. 다음, 이 플라스미드 DNA를 HeLa 세포에 형질주입하여 HA-hnRNP A1(6R/K) 단백질의 세포내 위치에 미치는 영향을 면역형광현미경법으로 분석하였다. 그 결과 hnRNP A1(6R/K) 단백질은 (wt 단백질처럼 핵에 위치하지 못하고) 핵과 세포질 모두에 퍼져 있는 것을 확인하였다. hnRNP A1(6R/K)의 안정성을 조사하기 위해서는 pcDNA1-HA-hnRNP A1(6R/K)를 HeLa 세포에 형질 주입시킨 다음 발현된 단백질을 웨스턴 블랏 실험으로 분석하였는데, 그 결과 HA-hnRNP A1(6R/K)는 (잘려서) 크기가 작아진 것을 확인할 수 있었다. 이 결과들로부터 HA-hnRNP A1(6R/K)가 핵과 세포질 모두에 퍼져 있는 것은 6R/K 돌연변이가 hnRNP A1의 핵 위치 능력에 영향을 미쳤기 때문이 아니라 6R/K 돌연변이가 일어난 부위 또는 그 부근이 절단되어 hnRNP A1의 핵 위치 신호(nuclear localization singal)인 M9 도메인이 들어있는 C-말단 부위를 잃었기 때문이라는 점을 확인 할 수 있었다. 본 연구의 결과들은 hnRNP A1에 있는 RGG 상자의 아르기닌이 hnRNP A1의 안정성에 중요한 역할을 한다는 것을 제시한다. 세균에서 발현시켜서 정제된 hnRNP A1(6R/K)의 RNA-결합 능력에 대한 영향 분석은 추후 과제로 남겨둔다.

Growth Inhibition and Apoptosis Induction of Essential Oils and Extracts of Nepeta cataria L. on Human Prostatic and Breast Cancer Cell Lines

  • Emami, Seyed Ahmad;Asili, Javad;HosseinNia, Shima;Yazdian-Robati, Rezvan;Sahranavard, Mehrdad;Tayarani-Najaran, Zahra
    • Asian Pacific Journal of Cancer Prevention
    • /
    • 제17권sup3호
    • /
    • pp.125-130
    • /
    • 2016
  • Nepeta cataria L. has been used in traditional medicine of some countries. Here the cytotoxic and apoptogenic activity of methanol extracts, n-hexane, dichloromethane, ethyl acetate, n-butanol, and acqueous extracts and the essential oil obtained from the aerial parts of the plant were evaluated with PC3, DU-145 and MCF-7 cell lines. Cell viability, histograms of PI stained fragmented DNA in apoptotic cells and Western blot analysis of proteins involved in the cascade of apoptosis were compared in all samples. Thirty components were identified as volatile, representing 99.7% of essential oil composition after GC-MS analysis of the oil obtained from aerial parts of the N. cataria by hydro-distillation. The major oil components of the essential oil were nepetalactone stereoisomers. Comparing IC50 values showed estrogen receptor positive PC3 cells were more sensitive to the cytotoxic effects of N. cataria in comparison with low hormone-receptor presenting DU-145 cells. Among multiple extracts and essential oils of the plant, only the ethyl acetate extract could significantly decrease cell viability in PC3 cells, in a concentration dependent manner. Ethyl acetate extract of N. cataria treated cells showed a sub-G1 peak in PC3 cells in a concentration dependent manner that indicates the involvement of an apoptotic process in ethyl acetate extract-induced cell death. Western blotting analysis showed that in PC3 cells treated with ethyl acetate (48 h) caspase 3 and PARP were cleaved to active forms. Overall, the results suggest that further analytical elucidation of N. cataria in respect to finding new cytotoxic chemicals with anti-tumor activity is warranted.

Berberine Inhibits the Production of Lysophosphatidylcholine-induced Reactive Oxygen Species and the ERK1/2 Pathway in Vascular Smooth Muscle Cells

  • Cho, Bong Jun;Im, Eun Kyoung;Kwon, Jun Hye;Lee, Kyung-Hye;Shin, Hye-Jin;Oh, Jaewon;Kang, Seok-Min;Chung, Ji Hyung;Jang, Yangsoo
    • Molecules and Cells
    • /
    • 제20권3호
    • /
    • pp.429-434
    • /
    • 2005
  • Lysophosphatidylcholine (lysoPC) induces vascular smooth muscle cell (VSMC) proliferation and migration, which has been proposed to initiate the intimal thickening in coronary atherosclerotic lesions. Berberine is an alkaloid in Berberis aquifolium and many other plants. Recently, it has been shown to have beneficial effects on the cardiovascular system, such as anti-hyperglycemic and cholesterol-lowering activity. In this study, we investigated its effects on lysoPC-induced VSMC proliferation and migration. Berberine inhibited lysoPC-induced DNA synthesis and cell proliferation in VSMCs, as well as migration of the lysoPC-stimulated VSMCs. It also inhibited the activation of extracellular signal-regulated kinases (ERKs) and reduced transcription factor AP-1 activity and the lysoPC-induced increases in intracellular reactive oxygen species (ROS). These results indicate that the inhibitory effects of berberine on lysoPC-stimulated VSMC proliferation and migration are attributable to inhibition of ROS generation and hence of activation of the ERK1/2 pathway. This suggests that berberine has potential in the prevention of atherosclerosis and restenosis.

Identification and Phylogeny of the Human Endogenous Retrovirus HERV-W LTR Family in Cancer Cells

  • Yi, Joo-Mi;Kim, Hwan-Mook;Kim, Heui-Soo
    • Animal cells and systems
    • /
    • 제6권2호
    • /
    • pp.167-170
    • /
    • 2002
  • The long terminal repeats (LTRs) of human endogenous retrovirus (HERV) have been found to be coexpressed with sequences of closely located genes. It has been suggested that the LTR elements have contributed to the structural change or genetic variation of human genome connected to various diseases and evolution. We examined the HERV-W LTR elements in various cancer cells (2F7, A43l , A549, HepG2, MIA-PaCa-2, PC-3, RT4, SiHa, U-937, and UO-31). Using genomic DNA from the cancer cells, we performed PCR amplification and identified twelve new HERV-W LTR elements. Those LTR elements showed a high degree of sequence similarity (88-99%) with HERV-W LTR (AF072500). A phylogenetic tree obtained by the neighbor-joining method revealed that HERV-W LTR elements could be mainly divided into two groups through evolutionary divergence. Three HERV-W LTR elements (RT4-2, A43l-1, and UO3l-2) belonged to Group 1, whereas nine LTR elements (2F7-2, A549-1, A549-3, HepG2-3, MP2-2, PC3-1, SiHa-8, SiHa-10, and U937-1) belonged to Group 11. Taken together, our new sequence data of the HERV-W LTR elements may contribute to an understanding of tissue-specific cancer by genomic instability of LTR integration.