• Title/Summary/Keyword: p-set

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Prediction Models of P-Glycoprotein Substrates Using Simple 2D and 3D Descriptors by a Recursive Partitioning Approach

  • Joung, Jong-Young;Kim, Hyoung-Joon;Kim, Hwan-Mook;Ahn, Soon-Kil;Nam, Ky-Youb;No, Kyoung-Tai
    • Bulletin of the Korean Chemical Society
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    • v.33 no.4
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    • pp.1123-1127
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    • 2012
  • P-gp (P-glycoprotein) is a member of the ATP binding cassette (ABC) family of transporters. It transports many kinds of anticancer drugs out of the cell. It plays a major role as a cause of multidrug resistance (MDR). MDR function may be a cause of the failure of chemotherapy in cancer and influence pharmacokinetic properties of many drugs. Hence classification of candidate drugs as substrates or nonsubstrate of the P-gp is important in drug development. Therefore to identify whether a compound is a P-gp substrate or not, in silico method is promising. Recursive Partitioning (RP) method was explored for prediction of P-gp substrate. A set of 261 compounds, including 146 substrates and 115 nonsubstrates of P-gp, was used to training and validation. Using molecular descriptors that we can interpret their own meaning, we have established two models for prediction of P-gp substrates. In the first model, we chose only 6 descriptors which have simple physical meaning. In the training set, the overall predictability of our model is 78.95%. In case of test set, overall predictability is 69.23%. Second model with 2D and 3D descriptors shows a little better predictability (overall predictability of training set is 79.29%, test set is 79.37%), the second model with 2D and 3D descriptors shows better discriminating power than first model with only 2D descriptors. This approach will be used to reduce the number of compounds required to be run in the P-gp efflux assay.

Quantile estimation using near optimal unbalanced ranked set sampling

  • Nautiyal, Raman;Tiwari, Neeraj;Chandra, Girish
    • Communications for Statistical Applications and Methods
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    • v.28 no.6
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    • pp.643-653
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    • 2021
  • Few studies are found in literature on estimation of population quantiles using the method of ranked set sampling (RSS). The optimal RSS strategy is to select observations with at most two fixed rank order statistics from different ranked sets. In this paper, a near optimal unbalanced RSS model for estimating pth(0 < p < 1) population quantile is proposed. Main advantage of this model is to use each rank order statistics and is distributionfree. The asymptotic relative efficiency (ARE) for balanced RSS, unbalanced optimal and proposed near-optimal methods are computed for different values of p. We also compared these AREs with respect to simple random sampling. The results show that proposed unbalanced RSS performs uniformly better than balanced RSS for all set sizes and is very close to the optimal RSS for large set sizes. For the practical utility, the near optimal unbalanced RSS is recommended for estimating the quantiles.

Generalized Extending Method for q-ary LCZ Sequence Sets (q진 LCZ 수열군의 일반화된 확장 생성 방법)

  • Chung, Jung-Soo;Kim, Young-Sik;Jang, Ji-Woong;No, Jong-Seon;Chung, Ha-Bong
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.33 no.11C
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    • pp.874-879
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    • 2008
  • In this paper, a new extending method of q-ary low correlation zone(LCZ) sequence sets is proposed, which is a generalization of binary LCZ sequence set by Kim, Jang, No, and Chung. Using this method, q-ary LCZ sequence set with parameters (N,M,L,${\epsilon}$) is extended as a q-ary LCZ sequence set with parameters (pN,pM,p[(L+1)/p]-1,p${\epsilon}$), where p is prime and p|q.

ON REGULAR PREOPEN SETS AND $p^{\ast}-CLOSED$ SPACES

  • CHO SEONG HOON;PARK JAE KEUN
    • Journal of applied mathematics & informatics
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    • v.18 no.1_2
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    • pp.525-537
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    • 2005
  • We introduce the notions of regular preopen sets and $p^{\ast}-closed$ spaces and investigate some of these properties. Also we give a characterization of p-closed spaces.

SPECTRAL CONTINUITY OF ESSENTIALLY p-HYPONORMAL OPERATORS

  • Kim, An-Hyun;Kwon, Eun-Young
    • Bulletin of the Korean Mathematical Society
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    • v.43 no.2
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    • pp.389-393
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    • 2006
  • In this paper it is shown that the spectrum ${\sigma}$ is continuous at every p-hyponormal operator when restricted to the set of essentially p-hyponormal operators and moreover ${\sigma}$ is continuous when restricted to the set of compact perturbations of p-hyponormal operators whose spectral pictures have no holes associated with the index zero.

Clinical Outcome of Elective Single Embryo Transfer Compared to Elective Double Embryo Transfer Performed at the Cleavage Stage (2개 대비 1개의 난할기 선발배아 이식에 따른 임상 결과)

  • Kang, Sang-Min;Lee, Sang-Won;Jeong, Hak-Jun;Chae, Soo-Jin;Yoon, San-Hyun;Lim, Jin-Ho;Lee, Seong-Goo
    • Clinical and Experimental Reproductive Medicine
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    • v.37 no.4
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    • pp.349-359
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    • 2010
  • Objective: This study was performed to compare the clinical outcome of elective single embryo transfer (eSET) performed at the cleavage stage to that of elective double embryo transfer (eDET). Methods: Of the women less than 36 years old who visited Daegu Maria from January 2008 to April 2009, the only women (n=330) with more than 8 mm of endometrial thickness and at least one good quality embryo, who were treated with GnRH agonist long protocol, were included in this study. After information about complications that can arise by multiple embryo transfer, either eSET or eDET was conducted by their request (167 and 163, respectively).Results: The implantation rate of eSET group was significantly higher than that of eDET group (53.9% vs. 40.2%, p<0.01). The twin pregnancy rate of eSET group was significantly lower than that of eDET group (1.1% vs. 32.3%, p<0.001). However, there were no significant differences between two groups in the clinical pregnancy (53.3% vs. 60.7%, p=0.172), ongoing pregnancy (47.3% vs. 54.6%, p=0.185) and live birth rates (44.9% vs. 50.9%, p=0.275). The number of the surplus embryos which developed to the blastocyst stage and cryopreserved at that stage was significantly higher in eSET group than that of eDET group ($3.2{\pm}2.6$ vs. $2.1{\pm}2.4$, p<0.001). Conclusion: These results suggest that eSET should reduce significantly the multiple baby pregnancy without decreasing the whole pregnancy rate in women with less than 36 years old.

Phylogenetic Analysis and Rapid Detection of Genus Phellinus using the Nucleotide Sequences of 18S Ribosomal RNA

  • Nam, Byung-Hyouk;Lee, Jae-Yun;Kim, Gi-Young;Jung, Heon-Ho;Park, Hyung-Sik;Kim, Cheng-Yun;Jo, Wol-Soon;Jeong, Soo-Jin;Lee, Tae-Ho;Lee, Jae-Dong
    • Mycobiology
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    • v.31 no.3
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    • pp.133-138
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    • 2003
  • Analysis of phylogenetic relationship was performed among Phellinus species based on 18S ribosomal subunit sequence data. Twenty-five strains of 19 Phellinus species including P. linteus were examined in this study. Regions of 18S ribosomal subunit were very conserved, but some variable regions between Phellinus species were observed. The species-specific detection primers, modified by 2 or 3 nucleotides in sense primer were designed based on 18S ribosomal DNA(rDNA) sequence data. The 210 by PCR bands were detected with annealing temperature $48^{\circ}C$. The 18S 2F-18S 4R detection primer set distinguished P. linteus from various Phellinus species but some species like P. baumii, P. weirianius, P. rhabarberinus and P. pomaceus also had weak reactivity on this primer set. The 18S 3F-18S 4R primer set distinguished only P. linteus from various Phellinus species, although sensitivity with this primer set was lower than that of 18S 2F-18 4R primer set. These primer sets would be useful for the detection of only P. linteus among unknown Phellinus species rapidly.

Prognostic Value of Inferior Shift of P wave Axis after Catheter Ablation for Longstanding Persistent Atrial Fibrillation based on Dallas Lesion Set Including Anterior Line

  • Shin, Dong Geum;Kim, Tae-Hoon;Jeong, Hyunmin;Kim, Alexander;Uhm, Jae-Sun;Joung, Boyoung;Lee, Moon-Hyoung;Hwang, Chun;Pak, Hui-Nam
    • International Journal of Arrhythmia
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    • 제18권2호
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    • pp.66-76
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    • 2017
  • Background and Objectives: Although an anterior linear ablation is an effective lesion set in radiofrequency catheter ablation (RFCA) for longstanding persistent atrial fibrillation (L-PeAF), its durability for bidirectional block (BDB) is only about 60% at repeat procedure. We hypothesized that changes in electrocardiogram (ECG) may predict an anterior line block state and the clinical outcome of L-PeAF ablation. Subjects and Methods: We studied 304 L-PeAF patients (77% male, $60{\pm}10yrs$), who consistently underwent RFCA Dallas lesion set (circumferential pulmonary vein isolation, posterior box lesion, and anterior line) protocol with subsequent comparison of pre-procedural and post-procedural P wave axes, and one year follow-up (n=205) sinus rhythm (SR) ECGs. Results: 1. P wave axis shifted inferiorly at immediate post-procedure (p<0.001), and was independently correlated with BDB of anterior line (${\ss}=10.4$, 95% confidence interval [CI] 2.79-17.94, p=0.008). 2. The degree of post-procedural inferior shift of P wave axis did not reflect clinical recurrence within one-year (n=205, p=0.923), potentially due to conduction recovery of an anterior line. However, among 160 patients without clinical recurrence within one-year, P wave axis at one-year ECG was independently associated with very late recurrence of AF after one-year (n=160, hazard ratio [HR] 0.98; 95% CI 0.97-0.99, p=0.001), during $45.6{\pm}16.7$ months of follow-up. 3. Among 22 patients who underwent repeat procedures, P wave axis shift was more significant in patients with maintained BDB of an anterior line than in those without (p=0.015). Conclusion: An inferior shift of P wave axis reflects the achievement and the maintenance of an anterior line BDB, and is associated with better long-term clinical outcome after catheter ablation for L-PeAF based on Dallas lesion set.

ON SIDON SETS IN A RANDOM SET OF VECTORS

  • Lee, Sang June
    • Journal of the Korean Mathematical Society
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    • v.53 no.3
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    • pp.503-517
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    • 2016
  • For positive integers d and n, let $[n]^d$ be the set of all vectors ($a_1,a_2,{\cdots},a_d$), where ai is an integer with $0{\leq}a_i{\leq}n-1$. A subset S of $[n]^d$ is called a Sidon set if all sums of two (not necessarily distinct) vectors in S are distinct. In this paper, we estimate two numbers related to the maximum size of Sidon sets in $[n]^d$. First, let $\mathcal{Z}_{n,d}$ be the number of all Sidon sets in $[n]^d$. We show that ${\log}(\mathcal{Z}_{n,d})={\Theta}(n^{d/2})$, where the constants of ${\Theta}$ depend only on d. Next, we estimate the maximum size of Sidon sets contained in a random set $[n]^d_p$, where $[n]^d_p$ denotes a random set obtained from $[n]^d$ by choosing each element independently with probability p.

SPECTRAL LOCALIZING SYSTEMS THAT ARE t-SPLITTING MULTIPLICATIVE SETS OF IDEALS

  • Chang, Gyu-Whan
    • Journal of the Korean Mathematical Society
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    • v.44 no.4
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    • pp.863-872
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    • 2007
  • Let D be an integral domain with quotient field K, A a nonempty set of height-one maximal t-ideals of D, F$({\Lambda})={I{\subseteq}D|I$ is an ideal of D such that $I{\subseteq}P$ for all $P{\in}A}$, and $D_F({\Lambda})={x{\in}K|xA{\subseteq}D$ for some $A{\in}F({\Lambda})}$. In this paper, we prove that if each $P{\in}A$ is the radical of a finite type v-ideal (resp., a principal ideal), then $D_{F({\Lambda})}$ is a weakly Krull domain (resp., generalized weakly factorial domain) if and only if the intersection $D_{F({\Lambda})}={\cap}_{P{\in}A}D_P$ has finite character, if and only if $F({\Lambda})$ is a t-splitting set of ideals, if and only if $F({\Lambda})$ is v-finite.