• 제목/요약/키워드: new strain

검색결과 2,120건 처리시간 0.03초

Identification of 12 radiation-resistant bacterial species in the phylum Proteobacteria new to Korea

  • Han, Joo Hyun;Maeng, Soohyun;Park, Yuna;Lee, Sang Eun;Lee, Byoung-Hee;Lee, Ki-eun;Kim, Myung Kyum
    • Journal of Species Research
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    • 제9권2호
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    • pp.85-104
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    • 2020
  • In 2019, after a comprehensive investigation of indigenous prokaryotic species in Korea, a total of 12 bacterial strains assigned to the phylum Proteobacteria were isolated from soil. With the high 16S rRNA gene sequence similarity (>98.8%) and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged to independent, predefined bacterial species. This study identified two species in the family Burkholderiaceae, one species in the family Comamonadaceae, two species in the family Oxalobacteraceae, one species in the family Micrococcaceae, one species in the family Bradyrhizobiaceae, one species in the family Methylobacteriaceae, one species in the family Rhizobiaceae, one species in the family Rhodocyclaceae, and one species in the family Sphingomonadaceae. There is no official report about these 12 species in Korea, so are described as unreported bacterial species in Korea in this study. Gram reaction, basic biochemical characteristics, colony, and cell morphology are also described in the species description section.

Latex 응집반응을 이용한 동물의 톡소플라즈마병 진단용 kit 개발에 관한 연구 (Development of diagnostic kit(Test-MT) for the microplate latex agglutination test of toxoplasmosis in animal)

  • 서명득;주후돈;데이빗 마-스
    • 대한수의학회지
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    • 제35권3호
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    • pp.583-593
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    • 1995
  • The present study was conducted to develop a toxoplasma latex agglutination test antigen(Test-MT) and evaluate the toxoplasma latex agglutination(LA) test using a newly-made "Test-MT kit" by comparing with the Toxo-MT kit(Eiken chemical co, Tokyo). Also, the specifity and sensitivity test were made by comparing with IFA test and IgG-ELISA. Tachyzoite suspensions of Toxoplasma gondii(RH strain) were ultracentrifuged for 30min at $60,000{\times}g(4^{\circ}C)$ and the supernatant was used as a water-lysate antigen. Polystyrene latex particles of $1.0{\mu}m$ in diameter(Polyscience co) were used for the preparation of sensitized latex-antigen supension(Test-MT). The frequency distribution of LA titers in Test-MT showed two peaks at <1:32 and 1:128. The borderline titer for positive test in Test-MT was determined to be 1:64. But the frequency distribution of LA tites in Toxo-MT showed two peaks at <1:16 and 1:64. The positive borderline was determined to be 1:32. Agreement of reactions between Test-MT and Toxo-MT kit by LA test was shown 92.5% in bovine sera and 97.0% in swine sera, respectively. From the results obtained here it was determined that the sensitized latex-antigen, Test-MT kit, for the microtiter agglutination test prepared as same as by the procedure described in the previous paper(Suh and Lee, 1993) was useful as a highly specific, sensitive and stable immunotiteration reagent for serodiagnosis of toxoplasma infection in animal sera.

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Isolation, characterization, and phylogenetic position of a new sulfur-oxidizing bacterium

  • Chang, So Youn;Yoon, Joon Sik;Park, Yong Ha;Yang, Song Suk;Yoon, Seong Myeong;Lee, In Hwa;Kim, Si Wouk
    • Journal of Microbiology
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    • 제35권3호
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    • pp.165-171
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    • 1997
  • A sulfer-oxidizing bacterium was isolated from mine wastewater and characterized. The isolate was gra-negative, rod (0.2 * 1.2-1.5.mu.m), nonmotiloe, catalase positive, and oxidase prositive. The opotimal pH and temperature for growth were 7.0 and 30.deg.C. respectively. The optimum thiosulfate concentration was 70 mM and the maximum growth rate was 0.081 hr. The major ubiquinone contained in the isolate was Q-8. The cellular fatty acid composition was $C_{16 : 0}$, $C_{18 : 1}$, $C_{17cyc}$,and $C_{19cyc}$ as nonpolar fatty acids, and 3-OH C10 : 0 and 3-OH $C_{12 : 0}$ as hydroxylated fatty acids. The isolate was a facultative chemolithoautotroph which can grow autotrophically on sodium thiosulfate and sodium sulfide and which can grow heterotrophically on yeast extract. It can also grow mixotrophically on sodium thiosulfate and yeast extract. Comparison of the 16S rRNA gene sequence of the isolate with that of Thiobacillus species and Paracoccus thiocyanatus revealed that it is closely related to T. caldus which belongs to the .betha.-subclass of the class Proteobacteria. However, the isolated could not grow at extremely low pH (pH 1-3.5). On the basis of the phenotypic, chemotaxonomic and phylogenetic data, the isolate was tentatively named Thiobacillus sp. strain C.ain C.

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평면이방성 암석의 변형특성 모델연구 (A Model Study on Deformability of A Transversely Isotropic Rock)

  • 박철환;박의섭;박찬
    • 터널과지하공간
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    • 제18권4호
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    • pp.252-262
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    • 2008
  • 한 개의 평면이방성 시험편의 일축압축시험을 통하여 얻을 수 있는 변형률은 최대 4개이므로 5개의 독립적 탄성상수를 이론적으로 결정할 수 없다. 이런 문제를 해결하기 위하여 Saint Venant에 의하여 가정식이 제안되었는데 Lekhnitskii는 실험 경험을 통하여 이 식을 재확인하였다. 그러나 이 식은 열동력학적인 탄성상수를 얻기 어려우며, 실험에서 이의 적용에는 한계가 있음이 경험적으로 발견되었다. 이에 새로운 가정식을 제안하였으며, 설정된 평면이방성 암석의 모델에서 이러한 제안식들의 적합성을 검토하였다. 그 결과 Lekhnitskii의 제안식은 경사각이 큰 시험편에는 유효하지만 $25{\sim}30$도 이하에서는 참값과 큰 오차를 보이는 결과로 해석되어 적용의 한계성이 있음이 밝혀졌다. 3개의 제안식들은 유효성이 각각 다르게 나타나는데 적합성은 시험편의 경사각에 좌우되며 탄성상수의 크기에 거의 무관한 것으로 판명되었다. 시험편의 경사각에 따라 가정된 식을 선택해야하는 지침이 본 연구의 결과로 제공되었다.

Paenibacillus elgii SD17 as a Biocontrol Agent Against Soil-borne Turf Diseases

  • Kim, Dal-Soo;Rae, Cheol-Yong;Chun, Sam-Jae;Kim, Do-Hyung;Choi, Sung-Won;Choi, Kee-Hyun
    • The Plant Pathology Journal
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    • 제21권4호
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    • pp.328-333
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    • 2005
  • Paenibacillus elgii SD17 (KCTC $10016BP^T$=NBRC $100335^T$) was recently reported as a new species. Based on its inhibitory activity to Thanatephorus cucumeris AG1-1, strain SD17 was further evaluated for its potential as a biocontrol agent against soil-borne diseases of turf grasses in Korea. P. elgii SD17 showed a broad spectrum of antimicrobial activity in vitro test and suppressed development of turf grass diseases; Pythium blight caused by Pythium aphanidermatum and brown patch caused by T. cucumeris AG1-1 on creeping bentgrass (Agrostis palustris) in the growth chamber tests. Under a condition for massive culture in a 5,000 L fermenter, P. elgii SD17 reached $6.4{\times}10^8$ spores/ml that resulted in approximately $1.0{\times}10^7$ cfu/g when formulated into a granule formulation (GR) using the whole culture broth instead of water. Using the GR formulation, biocontrol activity of P. elgii SD17 was confirmed. In the growth chamber tests, the GR formulation was effective against brown patch and Pythium blight with similar level of disease severity compared to each of the standard fungicides at the application rates of 10 g/$m^2$ or above. In the field tests, compared to each untreated control, the GR formulation also effectively controlled Pythium blight, brown patch and large patch at all the application rates of 5, 10 and 20 g/$m^2$, respectively, without significant response by the application rates. However its performance was inferior to each of the standard chemical fungicides. Based on these results, we consider this GR formulation of P. elgii SD17 as an effective biocontol agent to suppress Pythium blight, brown patch and large patch of turf grasses in Korea.

알칼리성 플루라나제를 생산하는 세균 Bacillus sp. S-1의 분리와 효소특성에 관한 연구 (lsolation of A Moderately Alkaline Pullulanase-Producing Bacillus sp. S-1 and Enzyme Characterization)

  • 이문조;심재경;박진우;김동수;김철호
    • 생명과학회지
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    • 제7권2호
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    • pp.95-106
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    • 1997
  • 전분의 효율적인 이용을 목적으로 토양으로부터 균체외 플루탄아제효소를 대량분비하는 약알칼리성균주 Bacillus sp. S-1를 분리하였다. 본 균주의 풀루란아제효소 생샨의 최적 pH는 6-10 사이였으며, 조효소의 가용성전분과 플루란에 대한 주요반응 최종산물은 말토트리오스로, 본 효소가 ${\alpha}$-1,6-glycosidic 결합에 특이적임을 알 수 있었다. 본 균주는 지금까지 알려진 알칼리성균주들의 플루란아제 생산성보다 월등히 높은 7.0U/ml를 생산하였으며, 정제효소의 최적 pH와 온도는 각각 8.0-10.0와 50-60$^{\circ}$C로서 알칼리성 및 호열성의 특성을 나타났었다. 또한 정제효소는 pH12에서도 약 10%의 활성을 유지하며, 넓은 pH범위에서도 안정하였다. 이러한 결과들은 본 균주가 플루란아제 생산균주로서의 이용가능한 잠재력을 보유하고 있음을 시사하였다.

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Molecular Characterization of a dsRNA Mycovirus, Fusarium graminearum Virus-DK21, which Is Phylogenetically Related to Hypoviruses but Has a Genome Organization and Gene Expression Strategy Resembling Those of Plant Potex-like Viruses

  • Kwon, Sun-Jung;Lim, Won-Seok;Park, Sang-Ho;Park, Mi-Ri;Kim, Kook-Hyung
    • Molecules and Cells
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    • 제23권3호
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    • pp.304-315
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    • 2007
  • Fusarium graminearum causes a serious scab disease of small grains in Korea. The nucleotide sequence of the genomic RNA of a double-stranded RNA (dsRNA) virus, Fusarium graminearum virus-DK21 (FgV-DK21), from F. graminearum strain DK21, which is associated with hypovirulence in F. graminearum, was determined and compared to the genome sequences of other mycoviruses, including Cryponectria hypoviruses. The FgV-DK21 dsRNA consists of 6,624 nucleotides, excluding the 3'-terminal poly(A) tail. The viral genome has 53- and 46-nucleotide 5' and 3' untranslated regions (UTRs), respectively, and five putative open reading frames. A phylogenetic analysis of the deduced amino acid sequence of ORF1, which encodes a putative RNA-dependent RNA polymerase, and those of other mycoviruses revealed that this organism forms a distinct virus clade with other hypoviruses, and is more distantly related to other mycoviruses (3.8 to 24.0% identity). However, pairwise sequence comparisons of the nucleotide and deduced amino acid sequences of ORFs 2 through 5 revealed no close relationships to other protein sequences currently available in GenBank. Analyses of RNA accumulation by Northern blot and primer extension indicated that these putative gene products are expressed from at least two different subgenomic RNAs (sgRNAs), in contrast to the cases in other hypoviruses. This study suggests the existence of a new, as yet unassigned, genus of mycoviruses that exhibits a potex-like genome organization and sgRNA accumulation.

초음파 탄성 영상 알고리듬 (Algorithms for Ultrasound Elasticity Imaging)

  • 권성재
    • 비파괴검사학회지
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    • 제32권5호
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    • pp.484-493
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    • 2012
  • 초음파를 사용해 음속도, 감쇠 계수, 밀도, 비선형 B/A 파라미터 등을 측정하여 인체 조직의 특성을 정량적으로 영상화하고자 하는 연구가 1980년대부터 많이 진행되어 왔으나 아직 상용화 단계에는 도달하지 못했다. 하지만 1990년대 초에 시작된 탄성 영상법은 최근 들어 초음파 진단기에 상용화되어 임상에서 B-모드 영상법과 함께 전립선, 유방, 갑상선, 간, 혈관 등을 진단하기 위한 보완적이며 더 정량적인 모드로 사용되고 있는 단계에 진입하였다. 본고에서는 주로 준정적 또는 정적탄성 영상법에 사용되는 여러 가지 알고리듬을 소개하고 특성을 비교하고자 한다. 대부분의 알고리듬은 상호상관함수 또는 자기상관함수 방법에 그 기반을 두고 있으며 전자는 래그를 변화시켜가면서 시간 이동량을 찾지만 후자는 보간 과정 없이 고정된 래그에서의 위상차로부터 시간 이동량을 바로 구해 변위를 추정하는 점이다.

Experimental study on steel-concrete composite beams with Uplift-restricted and slip-permitted screw-type (URSP-S) connectors

  • Duan, Linli;Chen, Hongbing;Nie, Xin;Han, Sanwei
    • Steel and Composite Structures
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    • 제35권2호
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    • pp.261-278
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    • 2020
  • In steel-concrete composite beams, to improve the cracking resistance of the concrete slab in the hogging moment region, a new type of connector in the interface, named uplift-restricted and slip-permitted screw-type (URSP-S) connector has been proposed. This paper focuses on the behavior of steel-concrete composite beams with URSP-S connectors. A total of three beam specimens including a simply supported beam with URSP-S connectors and two continuous composite beams with different connectors arrangements were designed and tested. More specifically, one continuous composite beam was equipped with URSP-S connectors in negative moment region and traditional shear studs in other regions. For comparison, the other one was designed with only traditional shear studs. The failure modes, crack evolution process, ultimate capacities, strain responses at different locations as well as the interface slip of the three tested specimens were measured and evaluated in-depth. Based on the experimental study, the research findings indicate that the larger slip deformation is allowed while using URSP-S connectors. Meanwhile, the tensile stress reduces and the cracking resistance of the concrete slab improves accordingly. In addition, the overall stiffness and strength of the composite beam become slightly lower than those of the composite beam using traditional shear studs. Moreover, the arrangement suggestion of URSP-S connectors in the composite beam is discussed in this paper for its practical design and application.

Vibration behavior of functionally graded sandwich beam with porous core and nanocomposite layers

  • Si, Hua;Shen, Daoming;Xia, Jinhong;Tahouneh, Vahid
    • Steel and Composite Structures
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    • 제36권1호
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    • pp.1-16
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    • 2020
  • In steel-concrete composite beams, to improve the cracking resistance of the concrete slab in the hogging moment region, a new type of connector in the interface, named uplift-restricted and slip-permitted screw-type (URSP-S) connector has been proposed. This paper focuses on the behavior of steel-concrete composite beams with URSP-S connectors. A total of three beam specimens including a simply supported beam with URSP-S connectors and two continuous composite beams with different connectors arrangements were designed and tested. More specifically, one continuous composite beam was equipped with URSP-S connectors in negative moment region and traditional shear studs in other regions. For comparison, the other one was designed with only traditional shear studs. The failure modes, crack evolution process, ultimate capacities, strain responses at different locations as well as the interface slip of the three tested specimens were measured and evaluated in-depth. Based on the experimental study, the research findings indicate that the larger slip deformation is allowed while using URSP-S connectors. Meanwhile, the tensile stress reduces and the cracking resistance of the concrete slab improves accordingly. In addition, the overall stiffness and strength of the composite beam become slightly lower than those of the composite beam using traditional shear studs. Moreover, the arrangement suggestion of URSP-S connectors in the composite beam is discussed in this paper for its practical design and application.