• KSII Transactions on Internet and Information Systems (TIIS)
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• 제6권5호
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• pp.1286-1302
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• 2012

In this paper, the resource allocation problem with proportional fairness rate in cognitive OFDM-based wireless network is studied. It aims to maximize the total system throughput subject to constraints that include total transmit power for secondary users, maximum tolerable interferences of primary users, bit error rate, and proportional fairness rate among secondary users. It is a nonlinear optimization problem, for which obtaining the optimal solution is known to be NP-hard. An efficient bio-inspired suboptimal algorithm called immune clonal optimization is proposed to solve the resource allocation problem in two steps. That is, subcarriers are firstly allocated to secondary users assuming equal power assignment and then the power allocation is performed with an improved immune clonal algorithm. Suitable immune operators such as matrix encoding and adaptive mutation are designed for resource allocation problem. Simulation results show that the proposed algorithm achieves near-optimal throughput and more satisfying proportional fairness rate among secondary users with lower computational complexity.

• Journal of Microbiology and Biotechnology
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• 제20권6호
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• pp.1018-1021
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• 2010

Metallic and non-metallic isomerases can be used to produce commercially important monosaccharides. To determine which category of isomerase is more suitable as a template for directed evolution to improve enzymes for galactose isomerization, L-arabinose isomerase from Escherichia coli (ECAI; E.C. 5.3.1.4) and tagatose-6-phosphate isomerase from Staphylococcus aureus (SATI; E.C. 5.3.1.26) were chosen as models of a metallic and non-metallic isomerase, respectively. Random mutations were introduced into the genes encoding ECAI and SATI at the same rate, resulting in the generation of 515 mutants of each isomerase. The isomerization activity of each of the mutants toward a non-natural substrate (galactose) was then measured. With an average mutation rate of 0.2 mutations/kb, 47.5% of the mutated ECAIs showed an increase in activity compared with wild-type ECAI, and the remaining 52.5% showed a decrease in activity. Among the mutated SATIs, 58.6% showed an increase in activity, whereas 41.4% showed a decrease in activity. Mutant clones showing a significant change in relative activity were sequenced and specific increases in activity were measured. The maximum increase in activity achieved by mutation of ECAI was 130%, and that for SATI was 190%. Based on these results, the characteristics of the different isomerases are discussed in terms of their usefulness for directed evolution of non-natural substrate isomerization.

• 식물조직배양학회지
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• 제27권2호
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• pp.143-148
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• 2000

감 돌연변이 획득을 위해 기내배양 신초에 ${\gamma}$-선을 조사하여 변이유기를 위한 적정 선량, ${\gamma}$-선 조사 식물체의 기내 발근 및 생육 특성을 조사한 결과는 다음과 같다. 감 돌연변이 유기를 위한 적정한 조사 선량 (LD$_{50}$)은 서촌조생 품종에서 1 krad와 2 krad사이이었고, 일목계차랑 품종은 1 krad이었다. ${\gamma}$-선을 조사한 신초를 1차,2차, 3차에 걸쳐 계대배양하는 각 기간의 기내 생육상태를 보면 ${\gamma}$-선량이 증가할수록 기내에서 생장한 신초의 길이가 감소하였으며, 신초의 정아가 가장 장애를 많이 받았다. 서촌조생 품종에서 신초의 37.5~58.3% 정도가 발근되었고 발근율은 2 krad 처리에서는 가장 낮았다. ${\gamma}$-선 조사선량이 높아지면 발근율과 뿌리의 발생수가 줄어들었다. 순화한 뒤 6주 동안 생장상에서 생육한 ${\gamma}$-선 조사 개체는 무처리 개체의 묘고가 6.0 cm인데 비해 2krad 처리개체는 평균 묘고는 2.6 cm에 불과하였다. 또한 발생한 가지의 수도 무처리에서는 1.0개인데 비해 2krad에서는 1.8 개로 많았다. 온실 생육시에서 ${\gamma}$-선 처리선량이 높았던 개체는 처리되지 않았거나 낮았던 개체에 비해 묘고가 작고 분지수가 많았으며, 생육상태도 부진하여 생육 중에 33%정도만 생존하고 나머지는 고사하였다.다.

• 동의생리병리학회지
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• 제28권6호
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• pp.621-629
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• 2014

This study aimed to evaluate the genotoxicity of GST (Gamisasangja-tang). For examining genotoxicity, we carried out bacterial reverse mutation assay, chromosome aberration assay, micronucleus induction test according to OECD guidelines. Bacterial reverse mutation assay: In GST treating group, regardless of existence S9 mix, revertant colonies counts appeared to be less than twice of negative control group and dose dependent increase. In positive control group, revertant colonies counts were shown to be more than twice of negative control croup. Chromosome aberration assay: All cell line showed repetition rate of abnormal chromosome aberration less than 5%, regardless of treating time, existence of S9 mix, and no significant change ($p{\succeq}0.05$) compared with negative control group. Micronucleus induction test: Micronucleated polychromatic erythrocytes (MNPCE) repetition rate of Polychromatic erythrocytes (PCE) showed no significant changes compared with negative control group ($p{\succeq}0.05$). PCE portion of total erythrocytes also showed no significant changes ($p{\succeq}0.05$). Our results showed that GST didn't induce any genotoxicity.

• 한국약용작물학회지
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• 제5권1호
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• pp.36-42
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• 1997

고추냉이의 배수체를 유도하기 위하여 EMS와 colchicine을 처리하였을 때 변화되는 단백질과 과산화효소 활성은 다음과 같이 나타났다. 발아율은 무주산이 울릉도산 보다 높았으며, GA3 100 ppm+ EMS 10 ppm 혼용처리시 무처리구에 비하여 모두 6배 이상 증가되었다. Mutagen 처리후 생존율도 울릉도산 보다 무주산에서 더 높게 나타났으며, 과산화효소 활성과 와사비의 초장은 감소되어 나타난 반면, 줄기와 뿌리는 비대되는 경향을 보였다. 무주산과 울릉도산의 단백질 양상이 비슷하고, mutagen을 처리했을 때 polypeptide spot수가 증가되었으나 단백질 pattern은 다르게 나타났고, 특히 EMS 처리는 무처리구에 비하여 현저하게 다른 양상을 보였다.

• 한국균학회지
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• 제24권2호통권77호
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• pp.135-141
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• 1996

맛과 향이 탁월하며 항암작용을 지닌 표고버섯 Lentinus edodes의 균사체 균질액에 자외선을 조사하여 돌연변이주를 유도, 선발하였다. 자외선 조사시 생존율은 3분 조사시 2.45%, 10분 조사시 0.024%이었다. 자외선 조사에 의한 돌연변이주 선발율은 0.40%이며, ethidium bromide (EtBr) 농화 법에 의해 glycerol 함유 배지에서 자라지 못하는 균주 34종을 선발하였다. 독립영양형으로 되돌아가는 비율은 $4.81{\times}10^{-4}{\sim}8.46{\times}10^{-4}$이었다. 돌연변이 주의 영양요구성을 검정하여 다양한 amino acid, nucleic acid, vitamin 요구성 균주를 선발하였다. 항진균성 약물의 MIC는 cycloheximide 2.0 ug/ml, p-fluorophenylalanine 1000 ug/ml, benomyl 2000 ug/ml이었다. p-fluorophenylalanine 1000 ug/ml에 내성 균주 5종과 benomyl 1000 ug/ml에 내성인 균주 8종을 선발하였다.

• 한국균학회지
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• 제34권1호
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• pp.34-38
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• 2006

양성자 빔 조사 후 조사선량에 따른 느타리버섯(Pleurotus ostreatus) 담자포자 발아율 및 균사체 생존율이 $10{\sim}100\;Gy$조사선량에서 시그모이드 곡선을 그리며 증가하였으며, 이후 500y 이상 조사시 유의성있게 감소하였다. 50% 치사율($L_{50}$)을 나타내는 조사선량은 담자포자가 500 Gy, 균사체가 400 Gy로 나타났으며, $D_{10}$값($D_{10}\;=\;-l/slope(b)$, y = a + bx) 은 각각 750 Gy와 1,250 Gy로 나타났다. 느타리버섯 돌연변이원으로서 양성자 빔 이용시 적정 조사선량은 담자포자의 경우 $500{\sim}750\;Gy$, 균사체의 경우 $400{\sim}1,000\;Gy$가 바람직하다고 판단되었다.

• Plant Biotechnology Reports
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• 제3권3호
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• pp.191-197
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• 2009

Four-leaf white clover is not found easily in nature due to its low appearance rate (1 in 10,000). Because people believe that it brings good luck and like to either keep it or present it to a loved one, it has commercial and ornamental value. To breed four-leaf clover, we exposed its flowers to ${\gamma}-rays$ at the pollination stage. The $M_1$ seeds produced following doses at 25-100 Gy showed an approximately 74% germination rate, with seedling survival at 46%. In the $M_1$ generation of plants irradiated within that dose range, we found an increased frequency of four leaflets. One of them, Jeju Lucky-1 (JL-1), had a frequency of about 60%. To see whether that mutation was somaclonal or genetic, we observed its $M_2$ generation and found that such a phenotype reappeared. Although our results demonstrated that the irradiation of fully mature flowers led to a higher frequency of 4-leaflets, we could not clearly explain the genetic mechanism involved. We suggest that JL-1 is valuable as a new variety, without further genetic fixation, because white clover can be propagated vegetatively by stolons.

• 한국육종학회지
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• 제40권1호
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• pp.15-21
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• 2008

It was previously pointed out that mutation is the ultimate source of variation. Adequate variation is needed for plant breeding if there is a limitation in natural genetic resources. When the ionizing radiation has been known to cause chromosomal and genomic alternations, it is widely used for inducing mutagenesis. The electron beam as an ionizing radiation is the principal physical mutagens that induces mutation and effectively used in plant breeding. Since dose-response relationships of electron beam in plant species are rarely known, we investigated the seed germination rate and early seedling growth of irradiated seeds of creeping bentgrass (Agrostis palustris Huds., cv Penn-A1) with various electron beam irradiating conditions (1, 1.3, 2 MeV at both 0.03 mA and 0.06 mA with dose of 100 Gy (Gray) and 0.03, 1, 1.3, 2 MeV at 0.03 mA with dose of 200 Gy, respectively) using electron accelerator at Korea Atomic Energy Research Institute. The growth parameters in terms of shoot length, primary root length, and secondary root length showed similar response between 0.06 / 1 (mA / MeV) at 100 Gy and 0.03 / 0.3 (mA / MeV) at 200 Gy. Bentgrass seed germination was mainly affected by the intensity of irradiated dose (Gray). Germination rate was lowered as the irradiated dose increased. On the other hand, early seedling growth was mainly governed not by the dose of radiation but by voltage.

• 대한의생명과학회지
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• 제11권4호
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• pp.465-471
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• 2005

Ofloxacin has antimycobacterial activity that possibly contributes a pivotal role in the second-line drug regimens that are used for the treatment of multidrug-resistant tuberculosis. However, in some communities, the resistance rate of Mycobacterium tuberculosis to this agent is surging. Therefore, a rapid and accurate method that can be used to determine the resistance of M tuberculosis to the ofloxacin can be very useful for effective treatment of the patients. As an effort to develop such a method, this study was set up to reveal general types of mutations that are related to ofloxacin resistance of M tuberculosis. From previous studies, it has been well known that ofloxacin resistance is associated with mutations in a gene encoding the gyrase A subunit protein. In this study, we obtained 43 ofloxacin-resistant and 50 ofloxacin-susceptible M tuberculosis clinical isolates from Masan National TB Hospital, and sequences of DNA fragment of 320 bp, region of gyrA corresponding to the ofloxacin resistance-determining region were analyzed. In brief, the results showed that a total of seven mutation types were found at gyrA. Theses mutations were all clustered within nucleotides 2574 to 2586 of the gyrA gene (codons 88 to 94). Codon 94 was the most frequently substituted site. Twenty-four of the 43 isolates had mutations at this position resulting in a total of five different types of amino acid changes $(Asp{\to}Ala,\;Asp{\to}Gly,\;Asp{\to}His,\;Asp{\to}Tyr,\;and\;Asp{\to}Asn)$. Five isolates contained a mutation at codon 90 resulting $Ala{\to}Val$ change. Four isolates had mutations at codon 91 causing a $Ser{\to}Pro$ change at this site. Two isolates contained a mutation at codon 88 and each of them resulted in different types of amino acid changes $(Gly{\to}Cys,\;Gly{\to}Ala)$. On the other hand, polymorphic site at codon 95 was found in both ofloxacin-resistant and ofloxacin-susceptible isolates. From these results, we concluded that the rate of mutations present in gyrA among ofloxacin-resistant M. tuberculosis in Korea is similar to the general rates of mutations found throughout the world. Subsequently, an oligonucleotide probe was designed based on the results of sequence analysis and was used to develop a dot blot hybridization assay system to determine ofloxacin-resistance of M tuberculosis. To evaluate this probe, dot-blot hybridization was carried out using other 57 clinical isolates, and the results showed that the dot-blot hybridization assay is good for detecting sequence alterations atgyrA gene.