• 한국환경생태학회지
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• 제28권5호
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• pp.523-530
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• 2014

2011년 6월 28일에 파주시 조리읍 장곡리 인근 도로에서 두부쪽이 손상되고, 해당연도에 태어난 맹금류 어린새를 발견하였고, 이를 DNA 바코드 기법으로 동정하였다. Mitochondrial DNA(mtDNA) cytochrome c oxidase I(COI) 유전자의 695bp 절편을 중합효소연쇄반응(polymerase chain reaction, PCR)으로 증폭하고 염기서열을 결정하였다. 결정된 염기서열을 BOLD systems과 NCBI의 BLAST에서 유사도 분석을 수행한 결과 총 5개체의 왕새매가 검색되었고, 염기서열의 동일성은 100%로 조사되었다. 또한, DNA 분자성판별 결과는 해당 개체가 암컷임을 나타내었다. 이러한 결과는 경기도 파주에서 1968년 이후 43년만에 왕새매의 번식이 확인된 중요한 정보로, 향후 광역야생동물구조센터는 야생동물의 사체 수거 시 인근 기탁등록보존기관과 연계하여 DNA시료를 확보하고 보다 정확한 종동정과 성판별 정보를 기록하는 등의 체계적인 관리시스템이 필요할 것으로 사료된다. 또한 이렇게 확보한 왕새매의 DNA 시료와 DNA 바코드 COI 유전자 서열은 유사종 연구의 참조표본(reference standard)로 이용될 수 있을 것이다.

• 한국해양학회지:바다
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• 제18권3호
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• pp.131-141
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• 2013

본 연구는 2011년 9월에서 12월까지 동해(북부, 중부, 남부), 서해, 동중국해의 해구에서 각각 채집된 살오징어의 계군을 형태 및 유전학 차이를 이용하여 구분하였다. 형태학적 차이에 따른 계군분석은 평균성숙외투장(20-22 cm)을 기준으로 하여 발생시기를 구분하였고, 유전학적 특성에 따른 계군은 mtDNA COI 영역의 염기변이에 의한 유전자 다양성을 이용하여 확인하였다. 본 연구 결과 평균성숙외투장을 기준으로 동해 북부는 발생시기가 하계군, 나머지 집단(동해 중부, 동해 남부, 동중국해 북부, 서해 북부)은 추계군으로 크게 2개의 계군으로 추정되었다. 유전자 분석결과 살오징어 mtDNA COI 영역에서 총 49개의 haplotype을 확인하였다. TCS 분석결과 haplotype 유전자형 네트워크가 star-like형태이며, 모든 집단에서 유전적 다양성(haplotype diversity, h)이 높고(h=0.661~0.841), 반면에 염기 다양도(nucleotide diversity, ${\pi}$)가 낮게 나타난 점으로 미루어보아 국내 서식 살오징어의 경우 최근에 급속한 집단의 분화가 이루어진 것으로 판단된다. Pairwise Fst를 이용한 집단분석결과 비록 모든 집단간의 유전적 차이가 낮게 나타났지만(Fst = 0.001~0.043) 평균성숙외투장 기준으로 같은 추계군으로 분류된 집단(동해 중부, 동해남부, 서해 북부)간에는 유전적 차이를 확인할 수 있었다(P<0.05).

• Fisheries and Aquatic Sciences
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• 제27권3호
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• pp.145-158
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• 2024

Life history characteristics, habitat landscape, and historical events are believed to have shaped the patterns of genetic variation in many taxa. The bony lip barb, Osteohilus vittatus, represent a potamodromous fish that complete all life cycle in freshwater and is widely distributed in Southeast Asia. It usually lives in small rivers and other freshwater habitats, and movement between habitats for either food or reproduction has been typical. These life history characteristics may promote gene flow, leading to less structured populations. However, many freshwater habitats are fragmented, which restricts gene flow. We investigate how this interplay has shaped patterns of genetic variation and phylogeographic structure within this species in the Sundaland, a biodiversity hotspot with a complex geological history, using mitochondrial cytochrome oxidase I (mtCOI) as a genetic marker. Forty-six mtCOI sequences of 506 bp long were collected from ten localities, eight geographically isolated and two connected. The sequences were used for population genetic and phylogeographic analyses. Our results showed a low genetic diversity within populations but high between populations. There was a deep phylogeographic structure among geographically isolated populations but a lack of such structure in the connected habitats. Among geographically isolated populations, sequence divergence was revealed, ranging from 1.8% between Java and Sumatra populations to 12.2% between Malaysia and Vietnam. An indication of structuring was also observed among localities that are geographically closer but without connectivity. We conclude that despite high dispersal capacity, the joint effects of historical events, long-term geographic isolation associated with sea level oscillation during the Pleistocene, and restricted gene flow related to lack of habitat connectivity have shaped the phylogeographic structure within the O. vittatus over the Sundaland.

• 한국응용곤충학회지
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• 제39권1호
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• pp.43-52
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• 2000

국내 4개 지역으로부터 채집된 배추좀나방(Plutella xylostella)의 미토콘드리아 DNA중 COI 유전자 일부 (438 bp)의 염기서열을 결정, 유전적 다양도 및 유전자 이동정도를 파악함으로써 집단 유전적 구조 및 특성에 대하여 연구하였다. 총 21개체로부터 13개의 mtDNA haplotype을 얻었으며 이들의 변이는 0.3~1.4%로 다른 곤충을 대상으로 한 유사연구와 비슷한 크기를 나타내었으며 haplotype 다양도는 매우 높았다(평균 h=0.81). 지리적으로 먼 제주도의 개체군과 경남 김해 두 지역(11km 거리)의 개체군을 비교한 결과, 통계적으로 유의한 정도의 유전적 격리(p<0.05%)는 전혀 관찰되지 않았으며, 대신 상당한 정도의 세대당 암컷 이동률(Nm=2-30)을 보였다. 또한 GenBank에 등록된 하와이의 배추좀나방 haplotype은 본 연구에서 얻은 것들과 유전적으로 흡사하였다. 종합적으로, 국내 배추좀나방은 전체적으로는 많은 haplotype수에 기인한 적절한 크기의 유전적 분화율을 보유하고 있으며 국지적으로는 상당한 이동력에 의한 장거리 이동으로 개체군내 높은 haplotype 다양도를 보이며 동시에 지역간의 유전적 유사성을 나타낸다고 요약되었다.

• 한국동물학회:학술대회논문집
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• 한국동물학회 2000년도 한국생물과학협회 학술발표대회
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• pp.277.1-277
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• 2000

No Abstract, See Full Text

• Journal of Species Research
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• 제1권2호
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• pp.133-150
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• 2012

Amynthas tralfamadore sp. nov. is described from the Mt Halla, Jeju Island biosphere exhibition housed at NIBR Incheon. This species' taxonomy is problematical since it is similar to Amynthas masatakae (Beddard, 1892) from Japan, itself previously reported from Korea and at one time associated with Amynthas campestris (Goto & Hatai, 1898) and A. parvicystis (Goto & Hatai, 1899), all three variously implicated in prior A. robustus (Perrier, 1872) along with Amynthas aspergillum (Perrier, 1872). Based on reinspection of the London lectotype of A. masatakae-here designated and sketched for the first time-the current solution is for maintenance of all five taxa separately. A closely-related Japanese species-Metaphire ryunome sp. nov.-is comparable to Korean Metaphire reisuiensis (Kobayashi, 1938) comb. nov. Another specimen was identified as Amynthas micronarius (Goto & Hatai, 1898), a new record for Korea. It matches the newly-designated neotype (Tokyo NMST An446) and an annotated synonymy is provided; however, erstwhile synonyms, Amynthas shimaensis (Goto & Hatai, 1899) and A. yamizoyamensis (Ohfuchi, 1935) combs. novae, are briefly redescribed and provisionally restored to the Japanese list. mtDNA COI-5P barcode analyses support species identifications.

• 한국응용곤충학회지
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• 제48권4호
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• pp.547-551
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• 2009

팥나방(Matsumuraeses phaseoli)과 어리팥나방(M. falcana)은 유사한 종으로 작물에 상이한 피해를 주고 있다. 그러나 형태적 특징만으로 이 두 동소적 유사종을 쉽게 구분하기 어렵다. 본 연구는 이 두 종을 뚜렷하게 판별할 수 분자마커를 개발했다. 두 종의 시토크롬 옥시다아제-I의 부분(약 500 bp) 염기서열이 밝혀졌다. 이를 바탕으로 두 종을 구분하는데 이용될 수 있는 판별 제한효소인 Rsa I이 선발되었고 PCR-RFLP를 통해 입증되었다.

• 한국수산과학회지
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• 제54권2호
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• pp.188-193
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• 2021

On March 13, 2018 two postflexion larval specimens (18.28 mm and 16.80 mm in standard length) belonging to the family Cryptacanthodidae, suborder Zoarcoidei were collected from Sokcho and Gangneung in Gangwon Province. The family Cryptacanthodidae comprises 4 species worldwide: 3 in the North Pacific Ocean and 1 in the western North Atlantic Ocean. As a result of analyzing 620 bp of the mtDNA COI region, the two postflexion larvae collected in this study were identified as Cryptacanthodes bergi by 99.5% agreement with C. bergi adult registered in NCBI. Postflexion larvae of C. bergi are compressed with large eyes and radial pectoral fins and the anus located in front of the center of the body. Melanophores were intensively distributed along the dorsal midline, except for caudal peduncle, and sporadically distributed on the back of the anus. In addition, there were limited star-like melanophores on the back of the gut. This species showed 0.058 genetic distance when compared mtDNA COI region of C. aleutensis, and it was well distinguished in the distribution pattern of black vesicles of the head, count and measurement traits. Considering the morphological and ecological characteristics of this species, we suggest a new Korean name, " Gwisin-jang-gaeng-i ".

• 한국수산과학회지
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• 제55권6호
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• pp.967-972
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• 2022

We investigated the molecular and morphological traits of 338 individual macrourids collected from the Southern Ocean (FAO area number, 88.1 and 88.3) between 2021 and 2022 by Korean bottom trawls. We first identified them as Macrourus caml and Macrourus whitsoni based on morphological traits, such as the number of pelvic fin rays (PF) and the rows of lower jaw teeth (LJT). However four individuals showed uncategorizable morphological characteristics such as PF and LJT numbers that overlapped between the two species. Subsequently, we obtained and analyzed 509 bp of the mtDNA COI sequences of 49 individuals, including the four unidentified individuals, and found only one single nucleotide polymorphism (SNP) that distinguished the two species. Finally, using our molecular identification key, we confirmed that each two individuals were misidentified as M. whitsoni and M. caml reversely. Our results suggest that the number of PF and LJT should be investigated together to accurately identify the two species.

• Journal of Ecology and Environment
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• 제44권3호
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• pp.143-154
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• 2020

Background: Korean wild boars (Sus scrofa coreanus Heude), because of their adaptability, are a widespread large mammal; however, they sometimes cause problems by invading farms and eating the crops, creating insufficiencies of some foods in South Korea. To understand the diet composition of Korean wild boars according to sex and body size, we collected their feces from Mt. Jeombongsan, Seoraksan National Park, South Korea. The sizes of fecal samples were measured, and genomic DNA was extracted from the samples. We amplified specific loci targeting plants (rbcL and trnL) and animals (COI) to detect the food sources of this omnivore and amplified the ZF and SRY regions to determine the sex. Results: In the wild boar feces, Rosaceae and Bryophyte were the most frequently detected plant food sources at the family level and Diptera and Haplotaxida were the most frequently detected animal food sources at the order level. As a result of sex determination, the sex ratio of wild boars collected in the Mt. Jeombongsan area was approximately 1:1. Our result suggested that there is no significant difference between the diet composition of male and female boars. Based on the average cross-sectional area of the feces, the top 25% were classified into the large body size group and the bottom 25% were classified into the small body size group. The large body size group mainly preferred Actinidiaceae, and the small body size group most frequently consumed Fagaceae. The diet of the large body size group was more diverse than the small body size group. Conclusions: Our results showed that the wild boars preferred Rosaceae, especially Sanguisorba and Filipendula, as plant food sources, and Diptera and Coleoptera of Insecta as animal food sources. Based on the results, the dietary preferences of wild boar appear to be distinguished by not their sex but their body size. Our study could help to elucidate the feeding ecology and population structure of wild boar, as well as address conservation and management issues.