• 제목/요약/키워드: mouse brain

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알렌 마우스 브레인 아틀라스를 이용한 반자동 신경섬유지도 분석 : 여기수와 신호대잡음비간의 DTI 획득 비교 (Semi-automated Tractography Analysis using a Allen Mouse Brain Atlas : Comparing DTI Acquisition between NEX and SNR)

  • 임상진;백현만
    • 한국방사선학회논문지
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    • 제14권2호
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    • pp.157-168
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    • 2020
  • 자기공명영상(Magnetic Resonance Image)을 이용한 구조적 연구 방법에서 뇌 구조 세분화 방법은 최근 빠르게 발전하여 구조 이미지의 자동 분할을 위한 유능한 방법론이 되었다. 특히 아틀라스 정보를 이미지에 등록해 피사체의 이미지로 전달하는 분할(Segmentation) 방법은 아틀라스(Atlas)의 정확도에 편향되기 때문에 높은 정확도를 갖고 있는 아틀라스가 필요하게 된다. 알렌 마우스 뇌 아틀라스(Allen Mouse Brain Atlas)는 마우스의 아틀라스 중에서 높은 정확도를 갖고 있어 다양한 분야에서 사용되고 있으며, 신경섬유지도(Tractography)에 필수적인 마우스 뇌구조의 정확한 좌표와 분할 정보를 제공할 수 있다. 또한 기능적 연구 방법인 뇌의 백질 경로를 재구성하는 확산텐서영상(Diffusion Tensor Image)에 대한 확률론적 신경섬유지도를 사용하여 포괄적인 뉴런 네트워크를 매핑 하였다. 인간의 뇌 연구 결과와 마우스의 뇌 연구 결과는 비교분석 할 수 있어 인간에게 적용하기 어려운 실험들을 질환이 모델링된 마우스를 통해 결과를 얻어 임상적으로 이용이 가능하기 때문에 마우스 실험의 중요성이 올라가고 있다. 하지만 마우스를 이용한 연구에서 인간과 마우스의 뇌 크기 차이로 인한 문제가 있어 동등한 영상의 질을 달성하려면 다양한 조건이 필요하게 되며, 그중 대표적으로 충분히 긴 스캔시간이 필요하게 된다. 충분히 긴 스캔시간을 확보하기 위해 본 연구에서는 마우스의 뇌를 샘플화시켜 Ex-vivo 실험이 진행되었으며, 마우스 커넥톰(Connectome) 매핑에 대한 참조를 제공하기 위해 이 연구는 아틀라스 정규화 도구인 ANTx와 확산 텐서 영상을 분석할 도구인 FSL을 사용하여 마우스 뇌의 반자동 분할 및 신경섬유지도 분석 파이프라인을 제시하여 다양한 마우스 모델에 적용하고자 했다. 또한, 신경섬유지도 분석을 위해 획득하는 확산텐서영상의 유용한 신호대 잡음비를 결정하기 위해 다양한 여기수의 영상을 획득해 비교분석하였다.

Characterization of tissue-specific mbu-3 gene expression in the mouse central nervous system

  • Lee, Chae-Jin;Cho, Eun-Young;Kim, Sun-Jung
    • BMB Reports
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    • 제41권12호
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    • pp.875-880
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    • 2008
  • Mbu-3 is a novel mouse brain unigene that was identified by digital differential display. In this study, expression of the gene was chased through developmental stages and the protein product was identified in the brain. The cDNA sequence was 3,995-bp long and contained an ORF of 745 AA. Database searches revealed that the chicken SST273 gene containing LRR- and Ig-domain was an mbu-3 orthologue. Tissue specificity for the gene was examined in embryos and in brains at post-natal and adult stages. During the embryonic stages, mbu-3 was localized to the central nervous system in the brain and spinal cord. In the early post-natal stages, the gene was evenly expressed in the brain. However, with aging, expression was confined to specific regions, particularly the hippocampus. The protein was approximately 95 kDa as determined by Western blot analysis of brain extracts.

Structure and Tissue Distribution of a Trinucleotide-Repeat-containing Gene (cag-3) Expressed Specifically in the Mouse Brain

  • Ji, Jin Woo;Yang, Hye Lim;Kim, Sun Jung
    • Molecules and Cells
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    • 제20권3호
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    • pp.348-353
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    • 2005
  • Using in silico approaches and RACE we cloned a full length trinucleotide (CAG) repeat-containing cDNA (cag-3). The cDNA is 2478 bp long and the deduced polypeptide consists of 140 amino acids of which 73 are glutamines. The genomic sequence spans approximately 79 kb on mouse chromosome 7 and the gene is composed of four exons. Standard and real-time PCR analyses of several mouse tissues showed that the gene is exclusively expressed in the brain and is not detected in embryonic stages. Within the brain, it is expressed throughout the forebrain region with predominant expression in the hypothalamus and olfactory bulb and very low levels in the mid- and hindbrain.

A Simultaneous NIRS-EEG Study of Seizure in the Mouse Brain

  • Lee, Seung-Duk;Lee, Min-Ah;Koh, Dalk-Won;Kim, Beop-Min;Choi, Jee-Hyun
    • 한국광학회:학술대회논문집
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    • 한국광학회 2008년도 하계학술발표회 논문집
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    • pp.159-160
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    • 2008
  • We measured hemodynamic responses of seizure in the mouse brain using frequencydomain near infrared spectroscopy (NIRS) and electroencephalogram (EEG). We adapted microfabricated optical holder for consistent contact of the optical fiber to the mouse brain. Our results show that the cerebral oxygenation and hemodynamics of mice can be stably monitored with EEG in the mouse brain.

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쥐 뇌의 고해상도 이미지에서 임계화 기법을 활용한 뇌혈관 네트워크 분석 및 3D 재현 (Analysis and 3D Reconstruction of a Cerebral Vascular Network Using Image Threshold Techniques in High-resolution Images of the Mouse Brain)

  • 이준석
    • 한국멀티미디어학회논문지
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    • 제22권9호
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    • pp.992-999
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    • 2019
  • In this paper, I lay the foundation for creating a multiscale atlas that characterizes cerebrovasculature structural changes across the entire brain of a mouse in the Knife-Edge Scanning Microscopy dataset. The geometric reconstruction of the vascular filaments embedded in the volume imaging dataset provides the ability to distinguish cerebral vessels by diameter and other morphological properties across the whole mouse brain. This paper presents a means for studying local variations in the small vascular morphology that have a significant impact on the peripheral nervous system in other cerebral areas, as well as the robust and vulnerable side of the cerebrovasculature system across the large blood vessels. I expect that this foundation will prove invaluable towards data-driven, quantitative investigations into the system-level architectural layout of the cerebrovasculature and surrounding cerebral microstructures.

소동물용 뇌자도 측정 시스템 개발 (Development of a Magnetoencephalograph System for Small Animals)

  • 김지은;김인선;강찬석;권혁찬;김진목;이용호;김기웅
    • Progress in Superconductivity
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    • 제13권1호
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    • pp.18-23
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    • 2011
  • We developed a four-channel first order gradiometer system to measure magnetoencephalogram for mice. We used double relaxation oscillation SQUID (DROS). The diameter of the pickup coil is 4 mm and the distance between the coils is 5 mm. Coil distance was designed to have good spatial resolution for a small mouse brain. We evaluated the current dipole localization confidence region for a mouse brain, using the spherical conductor model. The white noise of the measurement system was about 30 fT/$Hz^{1/2}$/cm when measured in a magnetically shielded room. We measured magnetic signal from a phantom having the same size of a mouse brain, which was filled with 0.9% saline solution. The results suggest that the developed system has a feasibility to study the functions of brain of small animals.

Characterization of Brain Tumor Cell using Vasopressin-SV40 T Ag Transgenic Mouse

  • Kim, Sung-Hyun;Lee, Eun-Ju;Kim, Myoung-Ok;Park, Jun-Hong;Kyoungin-Cho;Jung, Boo-Kyung;Kim, Hee-Chul;Hwang, Sol-Ha;Lee, Hoon-Taek
    • 한국동물번식학회:학술대회논문집
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    • 한국동물번식학회 2003년도 학술발표대회 발표논문초록집
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    • pp.44-44
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    • 2003
  • In previous reports, pVPSV.IGR2.1 transgenic mouse were described that brain tumor and lymphoma by reason of Vasopressin-SV40 T antigen. In this study, we produced pVPSV.IGR3.6 transgenic mouse that used pVPSV.IGR3.6 vector. Expression of transgene was vary different in transgenic mouse. We obtained 6 transgenic mouse line, moreover they had died at the age of 2~6 weeks without transmitting the transgene to their offspring, and had tumorigenesis on same location with pVPSV.IGR2.1 transgenic mouse. Only a founder mouse was investigated for expression of fusion gene. Here we extended this transgenic approach to the study of tumor progression. From the mouse, we confirmed brain tumor cell, after then cultured for investigate characterization. In this report, we demonstrate that reduction of survival rate in transgenic mouse fused vasopressin gene length, acquisition of brain tumor cell, composition with astrocyte cells and neuronal cells. Finally, cells had no change with increase of passage.

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마우스 뇌의 구조적 연결성 분석을 위한 분석 방법 (Analytical Methods for the Analysis of Structural Connectivity in the Mouse Brain)

  • 임상진;백현만
    • 한국방사선학회논문지
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    • 제15권4호
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    • pp.507-518
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    • 2021
  • 자기공명영상(MRI)은 뇌의 구조적 및 기능적 연구에서 핵심 기술로 필요성이 증가하고 있다. Tractography 분석을 이용하는 뇌지도(Connectome)는 MRI를 통해 뇌의 구조적 연결성을 확인하고 연결성의 변동성을 이용해 질병 병리학에 대한 이해를 높이는 방법으로 인간을 대상으로 활발한 연구가 진행되고 있다. 하지만 마우스 같은 작은 동물의 경우 분석 방법의 표준화가 부족하고 영상에 대한 정확한 전처리 전략 및 아틀라스 기반 신경 정보학에 대한 과학적 합의가 없다. 또한, 인간의 뇌에 비해 마우스의 뇌는 매우 작기 때문에 높은 해상도를 갖는 영상을 획득하는 것에도 어려움이 있다. 연구에서는 구조적 영상과 확산 텐서 영상을 이용해 구조 영역 세분화를 포함한 구조적 연결성 분석을 가능하게 하고 마우스 뇌 데이터를 처리하는 Allen Mouse Brain Atlas 기반 영상 데이터 분석 파이프라인을 제시한다. 각 분석 방법은 마우스 뇌 영상 데이터의 분석을 가능하게 하고 이미 인간 영상데이터로 검증된 소프트웨어를 이용해 신뢰성을 가질 수 있게 하였다. 또한, 연구에서 제시되는 파이프라인은 복잡한 분석 과정과 다양한 기능들 중 마우스 Tractography에 필요한 기능들을 정리하여 사용자가 효율적으로 데이터 처리를 하는데 최적화되었다.

Obtainment and Characterization of Brain Tumor Cell Using Vasopressin-SV40 T Ag Transgenic Mouse

  • Kim, Sung-Hyun;Lee, Eun-Ju;Kim, Myoung-Li;Park, Jun-Hong;Cho, Kyoungin;Jung, Boo-Kyung;Kim, Hee-Chul;Hwnag, Sol-Ha;Lee, Hoon-Taek;Ryoo, Zae-Young
    • 한국발생생물학회:학술대회논문집
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    • 한국발생생물학회 2003년도 제3회 국제심포지움 및 학술대회
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    • pp.105-105
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    • 2003
  • In previous reports, pVPSV.IGR2.1 transgenic mouse were described that brain tumor and lymphoma by reason of Vasopressin-SV40 T antigen. In this study, we produced pVPSV.IGR3.6 transgenic mouse that used pVPSV.IGR3.6 vector. Expression of transgene was vary different in transgenic mouse. We obtained 6 transgenic mouse line, moreover they had died at the age of 2-6 weeks without transmitting the transgene to their offspring, and had tumorigenesis on same location with pVPSV.IGR2.1 transgenic mouse. Only a founder mouse was investigated for expression of fusion gene. Here we extended this transgenic approach to the study of tumor progression. From the mouse, we confirmed brain tumor cell, after then cultured for investigate characterization. In this report, we demonstrate that reduction of survival rate in transgenic mouse fused vasopressin gene length, acquisition of brain tumor cell, composition with astrocyte cells and neuronal cells. Finally, cells had no change with increase of passage.

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Comparison with Some Antioxidants on Hydroxyl Radical in Mouse Whole Brain Culture

  • Lee, Jeong-Chae;Lim, Kye-Taek;Lee, Ki-Seoup;Jung, Hee-young
    • Toxicological Research
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    • 제14권4호
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    • pp.541-545
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    • 1998
  • This experiment carried out to compare the protective effects of some antioxidants to hydroxyl radicals in embryonic mouse whole brain tissue culture. The ICR mouse whole brain (13 embryonic day) was cultured in hydroxyl radical system in which radicals were generated by 20 mU / ml glucose oxidase (GO). In this experiment, to make ferrous iron from ferric iron, iron as an accelerator, and ascorbic acid as a reductant were used. For comparison of the protective effects to hydroxyl radicals, antioxidants such as desferrioxamine (DFX), laccase. water or ethanol extracts from Rhus Vemiciflua Stokes (RVS), and $\alpha$-tocopherol were used, because they relate to metal ion. The results of this experiment showed that all antioxidants protected effectively the cytotoxicity from hydroxyl radicals in the brain cultures. More than 70% of cell viabilities among different antioxidants was at 1 mM DFX, 1.43 $\mu\textrm{m}$ laccase, 12.5 $\mu\textrm{m}$ water extract, 12.5 $\mu\textrm{m}$ ethanol extract and 50 $\mu\textrm{m}$ $\alpha$-tocopherol individually, compared with 20 mU/ml GO alone. In comparison to the antioxidative activities of antioxidants, laccase and extracts from RVS showed strong antioxidative effects even at low concentration.

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