• 제목/요약/키워드: metal specificity

검색결과 63건 처리시간 0.026초

캠브리지 대학 고고인류학 박물관 소장 한복유물에 관한 연구 (Korean Dress Collection Held in the Museum of Archaeology and Anthropology in Cambridge)

  • 김순영
    • 복식
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    • 제61권9호
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    • pp.84-96
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    • 2011
  • This paper investigates the formative features and the historical meaning of the Korean dress collection held in the Museum of Archaeology and Anthropology in Cambridge. The Museum holds a total of eleven items of koran dresses that were donated by two anthropologists in the first half of the twentieth century. Male dresses consist of a white cotton jacket (Jeogori), a under-vest (Deungbaeja) made of light wisteria rings, a headband (Manggeon) made of horsehair, a broad brimmed top hat (Gat) made of black horsehair gauze, an oilskin cover (Galmo) drawn over the hat in wet weather, and a hemispherical hat box (Gatjib). Female dresses comprise a pink silk jacket (Jeogori), a blue silk skirt (Chima) with pleats, a pair of woman's white cotton trousers (Sokgot), a black silk cap (Jobawi) decorated with pink tassels and imitation pearls, and a pair of green and magenta silk shoes (Danghye) with leather soles and metal rivets. Theses Korean dresses show what the western anthropologists had interests in. When collectors collect the folk objects, they thought much of the specificity of shape and material, the esthetic appreciation, and the representation of daily life. In terms of the value as the historical materials in the history of Korean dress, the under-vest of wisteria, the hat box, and the female dresses are worth paying attention to. The under-vest is one that was produced in earlier time among the remaining under-vests. The hat box represents that the hat belonged to the merchant classes. The female dress items show daily dresses worn by women of higher classes of the society in the 1920s.

가지 열매 lectin의 생화학적 성질 (Biochemical Properties of Eggplant Fruit Lectin.)

  • 노광수
    • 생명과학회지
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    • 제18권3호
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    • pp.350-356
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    • 2008
  • 가지 열매로부터 neutral saline에 의한 추출, $(NH_4)_2SO_4$ 침전 및 Sephadex-G100을 이용한 affinity chromatography에 의해 분리한 lectin의 생화학적 특성을 연구하였다. Trypsin을 처리하지 않은 사람, 쥐와 토끼의 적혈구에서는 혈구 응집반응이 일어나지 않았으며, Trypsin을 처리한 사람, 쥐와 토끼의 적혈구 중에서는 쥐의 적혈구에서만 혈구 응집반응이 일어났다. SDS-PAGE에 의해 가지 lectin의 분자량을 확인한 결과, 19.3 kDa의 단일 band 임이 확인되었다. D-glucose를 포함하는 7개의 탄수화물은 100 mM 이하의 농도에서 lectin과 적혈구의 응집을 저해시키지 않았으므로, 탄수화물에 대한 특이성이 나타나지 않았다. 최적 반응온도 범위는 $10-20^{\circ}C$로서, $20-70^{\circ}C$에서 열에 대해 안정하였으며, 안정된 pH 범위는 pH 6.2-7.2로 확인되었다. $Ca^{2+},\;Co^{2+},\;Cu^{2+},\;Fe^{2+},\;Mg^{2+}$$Mn^{2+}$ 20 mM 이하의 농도에서는 lectin과 적혈구의 응집을 저해시키지 않았으므로, 금속이온에 대한 특이성이 나타나지 않았다

Overexpression of aprE2, a Fibrinolytic Enzyme Gene from Bacillus subtilis CH3-5, in Escherichia coli and the Properties of AprE2

  • Jeong, Seon-Ju;Cho, Kye Man;Lee, Chang Kwon;Kim, Gyoung Min;Shin, Jung-Hye;Kim, Jong Sang;Kim, Jeong Hwan
    • Journal of Microbiology and Biotechnology
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    • 제24권7호
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    • pp.969-978
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    • 2014
  • The aprE2 gene with its prosequence from Bacillus subtilis CH3-5 was overexpressed in Escherichia coli BL21(DE3) by using plasmid pET26b(+). After IPTG induction, active and mature AprE2 was produced when cells were grown at $20^{\circ}C$, whereas inactive and insoluble enzyme was produced in a large amount when cells were grown at $37^{\circ}C$. The insoluble fraction was resuspended with 6 M guanidine-HCl and dialyzed against 2 M Tris-HCl (pH 7.0) or 0.5 M sodium acetate (pH 7.0) buffer. Then active AprE2 was regenerated and purified by a Ni-NTA column. Purified AprE2 from the soluble fraction had a specific activity of $1,069.4{\pm}42.4U/mg$ protein, higher than that from the renatured insoluble fraction. However, more active AprE2 was obtained by renaturation of the insoluble fraction. AprE2 was most stable at pH 7 and $40^{\circ}C$, respectively. The fibrinolytic activity of AprE2 was inhibited by PMSF, but not by EDTA and metal ions. AprE2 degraded $A{\alpha}$ and $B{\beta}$ chains of fibrinogen quickly, but not the ${\gamma}$-chain. AprE2 exhibited the highest specificity for N-succinyl-Ala-Ala-Pro-Phe-pNA. The $K_m$ and $k_{cat}/K_m$ of AprE2 was 0.56 mM and $3.10{\times}10^4S^{-1}M^{-1}$, respectively.

Bacillus macerans에서 정제한 $\alpha$-cyclooextrin glucanotransferase의 구조와 칼슘이온이 기능에 미치는 영향 : X-ray 연구 (Structure and $Ca^{2+}$-ion effects on the function of $\alpha$-cyclodextrin Glucanotransferase from B. macerans : An X-ray study)

  • 최희욱;홍순강
    • KSBB Journal
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    • 제19권2호
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    • pp.159-163
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    • 2004
  • $\AA$의 분해능을 가진 Bacillus macerans에서 분리 정제한 cyclodextrin glucanotransferase의 결정 구조를 X-ray를 이용하여 분자 대치법을 사용하여 밝혔다. 정확한 구조는 16.6% ( $R_{free}$ = 20.5%)의 결정학적 R-factor를 가지고 있다. 두 개의 $Ca^{2+}$$_{-}$/ 이온이 점유된 새로운 금속 결합자리는 활성 자리의 도달 채널에서 발견되었다. $Ca^{2+}$$_{-}$/ 이온에 결합하는 음의 하전을 띤 아미노산 잔기들이 많이 밀집되어 있고 이 때, domain A ($\alpha$H에서 아미노산 잔기 283-297)의 중심부에 연결 부분은 $\beta$ 13-$\alpha$G 이었다. $\beta$13-$\alpha$G 부분은 활성 자리의 입구에 위치한 subsite 1에서 -1 과 Tyr260 (subsite 2)사이에 있는 촉매 부위 Glu258을 포함하고 있다. 비록 $\alpha$-CGTase 부류에서 잘 보존되어 있지는 않으나, 새로운 $Ca^{2+}$$_{-}$/ 자리 3a,b가 이 $\alpha$-CGTase의 활성도와 생성물의 특이성에 중요한 역할을 하리라 추측된다.다.

In Vitro Determination of Dengue Virus Type 2 NS2B-NS3 Protease Activity with Fluorescent Peptide Substrates

  • Khumthong, Rabuesak;Angsuthanasombat, Chanan;Panyim, Sakol;Katzenmeier, Gerd
    • BMB Reports
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    • 제35권2호
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    • pp.206-212
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    • 2002
  • The NS2B-NS3(pro) polyprotein segment from the dengue virus serotype 2 strain 16681 was purified from overexpressing E. coli by metal chelate affinity chromatography and gel filtration. Enzymatic activity of the refolded NS2B-NS3(pro) protease complex was determined in vitro with dansyl-labeled peptide substrates, based upon native dengue virus type 2 cleavage sites. The 12mer substrate peptides and the cleavage products could be separated by reversed-phase HPLC, and were identified by UV and fluorescence detection. All of the peptide substrates (representing the DEN polyprotein junction sequences at the NS2A/NS2B, NS2B/NS3, NS3/NS4A and NS4B/NS5 sites) were cleaved by the recombinant protease NS2B-NS3(pro). No cleavage was observed with an enzymatically inactive S135A mutant of the NS3 protein, or with a modified substrate peptide of the NS3/NS4A polyprotein site that contained a K2093A substitution. Enzymatic activity was dependent on the salt concentration. A 50% decrease of activity was observed in the presence of 0.1M sodium chloride. Our results show that the NS3 protease activity of the refolded NS2B-NS3(pro) protein can be assayed in vitro with high specificity by using cleavage-junction derived peptide substrates.

Mannobiose-Sepharose 담체합성 및 Affinity column chromatograpy에 의한 Debaryomyces sp. 유래 ${\alpha}$-Galactosidase의 정제 및 기질 특이성 (Purification and Substrate Specificity of Debaryomyces sp. ${\alpha}$-Galactosidase by Mannobiose-Sepharose Affinity Column Chromatograpy)

  • 박귀근
    • Applied Biological Chemistry
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    • 제49권3호
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    • pp.180-185
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    • 2006
  • 본 연구는 Debaryomyces sp.가 생산하는 ${\alpha}-galactosidase$의 mannobiose-sepharose 담체합성법에 의한 affinity column chromatography를 수행하여 효소정제, 효소 화학적 성질 및 galactosyl mannooligosacchrides에 대한 기질특이성 규명을 주요 목적으로 하였다. 배양시간별 활성과 pH의 변화에서 배양시간 40시간부터 활성이 증가하고 있으며, 70시간에서 25.8unit/ml의 최대활성을 나타내고 있으며, 배양초기 pH 6.0에서 시작되어 배양말기에는 pH 8을 나타내는 pH의 변화를 보였다. 최적 pH는 4.0, 최적온도는 $60^{\circ}C$이며 $pH\;3{\sim}4.5$에서 100%의 잔존활성을 나타낸 반면 pH 8.0에서는 20%로 급격히 감소하였고. 온도안정성에서 $30{\sim}50^{\circ}C$에서는 100%의 잔존활성을 나타내었으나 $70^{\circ}C$ 이상에서는 20% 이하의 잔존활성을 나타내었다. $Hg^{2+}$에 의해서 54%, $Ag^{2+}$에 의해서는 85%로 저해되었으며, 그 이외의 이온에 대해서는 큰 영향을 받지 않았다. Debaryomyces sp.유래 ${\alpha}-galactosidase$는 24시간 반응 후 melibiose, $Gal^3Man_3$를 완전 가수분해 하여 각각 galactose와 glucose, galactose와 mannotriose로 분해되었으나 $Gal^3Man_4$에 대해서는 12시간 반응시켜도 기질로부터 galactose 유리가 불가능함이 확인되었다.

A New Functional Model of Catechol Dioxygenases: Properties and Reactivity of [Fe(BLPA)DBC]$BPh_4$

  • Lim, Ji H.;Lee, Ho J.;이강봉;Jang, Ho G.
    • Bulletin of the Korean Chemical Society
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    • 제18권11호
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    • pp.1166-1172
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    • 1997
  • [FeⅢ(BLPA)DBC]BPh4, a new functional model for the catechol dioxygenases, has been synthesized, where BLPA is bis((6-methyl-2-pyridyl)methyl)(2-pyridylmethyl)amine and DBC is 3,5-di-tert-butylcatecholate dianion. The BLPA complex has a structural feature that iron center has a six-coordinate geometry with N4O2 donor set. It exhibits EPR signals at g=5.5 and 8.0 which are typical values for the high-spin FeⅢ (S=5/2) complex with axial symmetry. The BLPA complex reacts with O2 within a few hours to afford intradiol cleavage (75%) and extradiol cleavage (15%) products which is very unique result of all [Fe(L)DBC] complexes studied. The iron-catecholate interaction of BLPA complex is significantly stronger, resulting in the enhanced covalency of the metal-catecholate bonds and low energy catecholate to FeⅢ charge transfer bands at 583 and 962 nm in CH3CN. The enhanced covalency is also reflected by the isotropic shifts exhibited by the DBC protons, which indicate increased semiquinone character. The greater semiquinone character in the BLPA complex correlates well with its high reactivity towards O2. Kinetic studies of the reaction of the BLPA complex with 1 atm O2 in CH3OH and CH2Cl2 under pseudo-first order conditions show that the BLPA complex reacts with O2 much slower than the TPA complex, where TPA is tris(2-pyridylmethyl)amine. It is presumably due to the steric effect of the methyl substituent on the pyridine ring. Nevertheless, both the high specificity and the fast kinetics can be rationalized on the basis of its low energy catecholate to FeⅢ charge transfer bands and large isotropic NMR shifts for the BLPA protons. These results provide insight into the nature of the oxygenation mechanism of the catechol dioxygenases.

별불가사리 렉틴의 특성 및 암 세포 성장저해 효과 (Characteristics and Cancerostatic Activity of the Starfish Lectin)

  • 전경희;박채수;박원학;최수정;소명숙;정시련
    • 약학회지
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    • 제41권4호
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    • pp.421-432
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    • 1997
  • A new lectin was partially purified from starfish,Asterina pectinifera by means of physiological saline extraction, salt fractionation, ion exchange chromatography and hy droxyapatite chromatography, and it was named APL. The biochemical properties of the APL were characterized. In addition, its effects on lymphocyte mitogenicity and cancer cell agglutinability were tested. The APL agglutinated nonspecifically human erythrocytes and rabbit blood cells. Agglutinability was decreased to 30% of control activity below pH 5 and above pH 9 and was relatively unstable at increasing temperatures above 60$^{\circ}C$. The activity was reduced by addition of two kinds of metal ions, $Ba^{2+},\;Mn^{2+}$ and chelating agent, EDTA. APL was proved to be glycoproteins containing 9% sugars. For carbohydrate specificity, it was found that the activity of APL was inhibited by D(+)-glucosamine, D(+)-galactosamine, stachyose, N-acetyl-galactosamine and methyl-${\alpha}$-D-galactopyranoside among 35 sugars tested. In amino acid composition, the contents of acidic amino acids such as aspartic acid and glutamic acid were relatively high. This result suggest that the isoelectric point would be in a lower range. APL was found that it promotes the division of human lymphocytes. APL was proved to be a potent agglutinin for cancer cells such as HeLa, L929 and L1210 cells. Significant changes on the HeLa cell surfaces affected by APL were observed under the electron microscope.

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Characterization of a GH8 β-1,4-Glucanase from Bacillus subtilis B111 and Its Saccharification Potential for Agricultural Straws

  • Huang, Zhen;Ni, Guorong;Zhao, Xiaoyan;Wang, Fei;Qu, Mingren
    • Journal of Microbiology and Biotechnology
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    • 제31권10호
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    • pp.1446-1454
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    • 2021
  • Herein, we cloned and expressed an endo-β-1,4-glucanase gene (celA1805) from Bacillus subtilis B111 in Escherichia coli. The recombinant celA1805 contains a glycosyl hydrolase (GH) family 8 domain and shared 76.8% identity with endo-1,4-β-glucanase from Bacillus sp. KSM-330. Results showed that the optimal pH and temperature of celA1805 were 6.0 and 50℃, respectively, and it was stable at pH 3-9 and temperature ≤50℃. Metal ions slightly affected enzyme activity, but chemical agents generally inhibited enzyme activity. Moreover, celA1805 showed a wide substrate specificity to CMC, barley β-glucan, lichenin, chitosan, PASC and avicel. The Km and Vmax values of celA1805 were 1.78 mg/ml and 50.09 µmol/min/mg. When incubated with cellooligosaccharides ranging from cellotriose to cellopentose, celA1805 mainly hydrolyzed cellotetrose (G4) and cellopentose (G5) to cellose (G2) and cellotriose (G3), but hardly hydrolyzed cellotriose. The concentrations of reducing sugars saccharified by celA1805 from wheat straw, rape straw, rice straw, peanut straw, and corn straw were increased by 0.21, 0.51, 0.26, 0.36, and 0.66 mg/ml, respectively. The results obtained in this study suggest potential applications of celA1805 in biomass saccharification.

Identification and Characterization of a Novel Thermostable GDSL-Type Lipase from Geobacillus thermocatenulatus

  • Jo, Eunhye;Kim, Jihye;Lee, Areum;Moon, Keumok;Cha, Jaeho
    • Journal of Microbiology and Biotechnology
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    • 제31권3호
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    • pp.483-491
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    • 2021
  • Two putative genes, lip29 and est29, encoding lipolytic enzymes from the thermophilic bacterium Geobacillus thermocatenulatus KCTC 3921 were cloned and overexpressed in Escherichia coli. The recombinant Lip29 and Est29 were purified 67.3-fold to homogeneity with specific activity of 2.27 U/mg and recovery of 5.8% and 14.4-fold with specific activity of 0.92 U/mg and recovery of 1.3%, respectively. The molecular mass of each purified enzyme was estimated to be 29 kDa by SDS-PAGE. The alignment analysis of amino acid sequences revealed that both enzymes belonged to GDSL lipase/esterase family including conserved blocks with SGNH catalytic residues which was mainly identified in plants before. While Est29 showed high specificity toward short-chain fatty acids (C4-C8), Lip29 showed strong lipolytic activity to long-chain fatty acids (C12-C16). The optimal activity of Lip29 toward p-nitrophenyl palmitate as a substrate was observed at 50℃ and pH 9.5, respectively, and its activity was maintained more than 24 h at optimal temperatures, indicating that Lip29 was thermostable. Lip29 exhibited high tolerance against detergents and metal ions. The homology modeling and substrate docking revealed that the long-chain substrates showed the greatest binding affinity toward enzyme. Based on the biochemical and insilico analyses, we present for the first time a GDSL-type lipase in the thermophilic bacteria group.