• Journal of Microbiology and Biotechnology
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• v.19 no.8
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• pp.765-773
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• 2009

Edwardsiella tarda is a pathogen with a broad host range that includes human and animals. The E. tarda hemolysin (Eth) system, which comprises EthA and EthB, is a noted virulence element that is widely distributed in pathogenic isolates of E. tarda. Previous study has shown that the expression of ethB is regulated by iron, which suggests the possibility that the ferric uptake regulator (Fur) is involved in the regulation of ethB. The work presented in this report supports the previous findings and demonstrates that ethB expression was decreased under conditions when the E. tarda Fur ($Fur_{Et}$) was overproduced, and enhanced when $Fur_{Et}$ was inactivated. We also identified a second ethB regulator, EthR, which is a transcription regulator of the GntR family. EthR represses ethB expression by direct interaction with the ethB promoter region. In addition to ethB, EthR also modulates, but positively, luxS expression and AI-2 production by binding to the luxS promoter region. The expression of ethR itself is subject to negative autoregulation; interference with this regulation by overexpressing ethR during the process of infection caused (i) drastic changes in ethB and luxS expressions, (ii) vitiation in the tissue dissemination and survival ability of the bacterium, and (iii) significant attenuation of the overall bacterial virulence. These results not only provide new insights into the regulation mechanisms of the Eth hemolysin and LuxS/AI-2 quorum sensing systems but also highlight the importance of these systems in bacterial virulence.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.14 no.2
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• pp.59-65
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• 1981

The purpose of the present study is to find the light intensity which induces maximum gathering rate and to observe the variation of the gathering rate both in daytime and at night by rising two species of commercial fishes: gray rock cod. Sebastes inermis (Cuvier et Valenciennes) and cat shark, Scyliorhinus torazame (Tanaka). An experimental tank $(360L\;{\times}\;50W\;{\times}\;55H\;cm)$ was set up in a dark room. An illumination system was attached to one end of the tank to control horizontal light intensity. Six artificial light sources were prepared by combination of two light bulbs (5W, 150W) and seven filters. During the experiment water depth was maintained 50 cm level in the tank. The tank was marked into six longitudinal sections each being 60 cm long to observe the distribution of fish. The fish were acclimatized in dark condition for 40 minutes prior to the main experiment. Upon turning on the light, the number of fish in each section was counted 40 times every 30 seconds, and the gathering rates were obtain from the average number of fish in each section. The light intensity inducing maximum gathering rate is as follows: gray rock cod: 16.6 lux (10.6-24.5 lux) (day), 0.7 lux (0.5-1.1 lux) (night), cat shark: 1.9 lux (1.2-2.9 lux) (day), 16.6 lux(10.6-24.5lux) (night). Trend of the gathering rate in illumination time revealed different results in two fish species. Gathering rate of gray rock cod did not show any definite pattern but fluctuated irregularly. The gathering rate was some fluctuating at night. However, that of cat shark was almost constant and did not show any distinctive difference between day and night.

• Korean Journal of Microbiology
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• v.38 no.3
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• pp.173-179
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• 2002

The functions of riboflavin synthesis genes ( ribI,II,III and IV) found immediately downstream of luxG in the lux operon from Photobacterium species were identified using the biochemical and genetical analysis. The ribI-III gene codes for protein corresponding to that coded by the second (riboflavin synthase), third (3,4-dihydroxy 2-butanone 4-phosphate synthase/GTP cyclohydrolase II) and fourth (lumazine synthase) gene, respectively, of Bacillus subtilis rib operon with the respective gene procuct sharing 41-50% amino acid sequence identity. Unexpectedly, the sequence of the ribIV product of Photobacterium phosphoreum does not correspond in sequence to the protein encoded by the fifth rib gene of Bacillus subtilis. Instead the gene (ribIV) codes for a polypeptide similar in sequence to GTP cyclohydrolase II of Escherichia coli and the carboxy terminal domain of the third rib gene from Bacillus subtilis. Complementation of Escherichia coli riboflavin auxotrophs showed that the function of the gene products of ribII and ribIV are DHBP synthase and GTP cyclohydrolase II, respectively. In addition the experiment, showing that increase in thermal stability of riboflavin synthase coded by ribIon coexpression with ribIII, provided indirect evidence that the latter gene codes for lumazine synthase.

• Horticultural Science & Technology
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• v.16 no.1
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• pp.30-32
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• 1998

Growth environments of Cypripedium macranthum Sw. habitats distributed in mountains and highland plains of northern part of Kyunggi-do and Kangwon-do in Korea, were studied in order to obtain basic data. Mean temperature in habitats of Cypripedium macranthum was $14^{\circ}C$ and minimum value was recorded $-7^{\circ}C$ in January, and maximum value was $28^{\circ}C$ in August. Mean soil temperature of the orchid sites was $11^{\circ}C$ and minimum value was $-4^{\circ}C$ in January. The light intensity from March to May was 48,000~51,400 lux and the lowest value was 11,500 lux in July. Light intensity in shade habitat sites from July to August was dropped to 470~865 lux, and the SPAD value was 34.3 in July, which was the highest of the year. The range of soil acidity was pH 5.6~5.8 and soil moisture was 16.4%~36.2%. The highest soil moisture was 36.2% on June. The Cypripedium habitats were correlated with temperature (especially high temperature), light intensit, and soil moisture. However, critical factor seems to be soil moisture in distribution of Cypripedium macranthum in Korea.

• Journal of Microbiology and Biotechnology
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• v.20 no.2
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• pp.415-424
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• 2010

The purpose of this study was to investigate the relationship between the global regulatory mechanism known as quorum sensing and expression of virulence factors in Escherichia coli O157:87. A nonpolar luxS deletion was introduced into the chromosome of strain CI03J, a human clinical isolate from South Korea, to create the ${\Delta}luxS$ mutant strain ML03J. Phenotypic characterization of wild-type and mutant strains demonstrated that ML03J had no obvious growth or metabolic defects on 0.2% glucose LB medium, produced a functionally defective flagellum, and could not utilize sorbose; the biological significance of sorbose utilization is unknown. Omics-based analysis revealed the involvement of LuxS in the transcriptional activation of several flagella/chemotaxisrelated genes (flhD; fliA, C, D, S, Z; and cheA, Y, Z), repression of glutamate-dependent acid resistance genes (gadAB), and expression of virulence factors including Shiga toxin, hemolysin, and SepD within the LEE pathogenicity island.

• Korean Journal of Ecology and Environment
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• v.50 no.2
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• pp.187-194
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• 2017

This study was intended to evaluate the removal efficiency of nutrients in effluents of wastewater using microalgae. Microalgae used in the culture experiment collected in stream and reservoir located in Gyeongsangbuk-do. Dominant species in prior-culture tank were Monoraphidium contortum, Scenedesmus acutus, Coelastrum microporum and Chlorella sp. Dominant species in synthetic wastewater culture under the 4000 Lux and 8000 Lux were Chlorella sp. and Scenedesmus obliquus. The removal efficiency of $NO_3-N$ under the 4000 Lux and 8000 Lux were 27.2%~88.1% and 63.0%~83.6% respectively. The removal efficiency of $PO_4-P$ under the 4000 Lux and 8000 Lux showed above 93%. Removal efficiency of nutrients of $1.0{\times}10^6cells\;mL^{-1}$ inoculation concentration was more higher than that of nutrients of $1.0{\times}10^5cells\;mL^{-1}$ and $1.0{\times}10^7cells\;mL^{-1}$ inoculation concentration. Microalgae cultured in synthetic wastewater removed 94.9% of TN and 90.0% of TP. The removal rate of TN and TP in synthetic wastewater were $1.961mg\;L^{-1}\;day^{-1}$ and $0.200mg\;L^{-1}\;day^{-1}$ respectively. Nutrient removal efficiency of microalgae according to kinds of wastewater showed the highest in the private sewage.

• Interdisciplinary Bio Central
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• v.3 no.3
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• pp.10.1-10.8
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• 2011

Introduction: Hash functions are computer algorithms that protect information and secure transactions. In response to the NIST's "International Call for Hash Function", we developed a biological hash function using the computing capabilities of bacteria. We designed a DNA-based XOR logic gate that allows bacterial colonies arranged in a series on an agar plate to perform hash function calculations. Results and Discussion: In order to provide each colony with adequate time to process inputs and perform XOR logic, we designed and successfully demonstrated a system for time-delayed bacterial growth. Our system is based on the diffusion of ${\ss}$-lactamase, resulting in destruction of ampicillin. Our DNA-based XOR logic gate design is based on the op-position of two promoters. Our results showed that $P_{lux}$ and $P_{OmpC}$ functioned as expected individually, but $P_{lux}$ did not behave as expected in the XOR construct. Our data showed that, contrary to literature reports, the $P_{lux}$ promoter is bidirectional. In the absence of the 3OC6 inducer, the LuxR activator can bind to the $P_{lux}$ promoter and induce backwards transcription. Conclusion and Prospects: Our system of time delayed bacterial growth allows for the successive processing of a bacterial hash function, and is expected to have utility in other synthetic biology applications. While testing our DNA-based XOR logic gate, we uncovered a novel function of $P_{lux}$. In the absence of autoinducer 3OC6, LuxR binds to $P_{lux}$ and activates backwards transcription. This result advances basic research and has important implications for the widespread use of the $P_{lux}$ promoter.

• Design Convergence Study
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• v.19 no.2
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• pp.107-122
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• 2020

"lux et sonitus" is an audiovisual art exhibition series with an artistic combination of music and video at its center. Since its first introduction in 2013, the series have been held five times under the theme of "exhibition of music", presenting works featuring both audio and visual media in an effort to explore the key issues in the field of audiovisual art. In addition to the previous achievement of the exhibition, recent works from the series feature new concepts that explore the possibility of expanding the realm of synesthesia. In this paper, details of the entire series are summarized. In addition, theoretical background behind creative results of the series is analyzed in the context of music, synesthesia and space found in Nam June Paik's audiovisual artwork as a source of inspiration. This will contribute to establishing a vision for the creation/analysis of audiovisual art in the future.

• The Journal of Korean Institute of Communications and Information Sciences
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• v.16 no.11
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• pp.1132-1142
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• 1991

This paper proposed a method of feature parameter extraction for shape information analysis of moving object. In the 2-D plane, moving object are extracted by the difference method. Feature parameters of moving object are chosen area, perimeter, a/p ratio, vertex, x/y ratio. We changed brightness variation from the range of 600Lux to the 1400Lux and then determined Permissible Error range of feature parameter due to the brightness variation. So as to verify the validity of proposed method, experiment are performed with a toy car and it's results showed that decision error was less than 6%.

• Korean Journal of Microbiology
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• v.42 no.4
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• pp.277-285
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• 2006

The most biofilm forming bacteria in catheter, Esctherichia coli, Pseudomonas aeruginosa, and Staphylococcus aureus were isolated and identified from a patient's catheter occuring catheter-associated urinary tract infection (CA-UTI). We examined mRNA expression and its quantification of AIs synthetic genes encoding signal substance of quorum sensing from each bacterial species in order to elucidated quorum sensing mechanism. Both pure cultures for each bacterial strains and a mixed cultures with three were grown for 24 hr and 30 days. Initial densities to be able to detect mRNA expression oil single strains culture were shown at $2.4{\times}10^5$ CFU/ml, $5.4{\times}10^6$ CFU/ml of E. coli for ygaG and S. aureus for luxS, and at $6.9{\times}10^4$ CFU/ml of P. aeruginosa for rhlI and lasI. Also, in mixed culture of three, initial cell densities of mRNA expression were appear to at $7.3{\times}10^5$ CFU/ml, $1.6{\times}10^7$ CFU/ml of E. coli for ygaG and S. aureus for luxS, and at $2.1{\times}10^5$ CFU/ml of P. aeruginosa for rhlI and lasI. Each AIs synthetic gene was expressed in initial cell density and the mRNA expression of the genes were detected continously during 30 days. And then, the quantification of mRNA expression level of ygaG, rhlI, last, and luxS which were related AIs synthesis was done each time point by real-time RT-PCR. Interestingly, the mRNA levels of ygaG, rhlI, lasI, and luxS from the mixed culture was higher than those from each single strain culture. In the case of E. coli ygaG, the amount of transcript from the mixed culture was at least 30 times for that from single culture. In the case of P. aeruginosa rhlI and lasI, the amount of transcript from the mixed culture was at least 40 times and 250 times for that from single strain culture. In the case of S. aureus luxS, the amount of transcript from the mixed culture was at least 5 times for that from single strain culture. And specially, the mRNA expression of rhlI and lasI of P. aeruginosa showed the highest efficency among four AIs synthetic genes.