• 제목/요약/키워드: linear mixed effects model

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군집 특정 변량효과를 포함한 유한 혼합 모형의 베이지안 분석 (Bayesian analysis of finite mixture model with cluster-specific random effects)

  • 이혜진;경민정
    • 응용통계연구
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    • 제30권1호
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    • pp.57-68
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    • 2017
  • 대량의 데이터에 있어 전반적인 특성 및 구조를 파악하는데 유용하기 때문에 다양한 분야에서 군집분석을 사용하고 있다. Dempster 등 (1977)에서 정의된 expectation-maximization(EM) 알고리즘은 가장 보편적으로 사용되는 군집분석 방법이다. 선형모형의 유한혼합물(finite mixture of linear model) 기법 또한 군집분석 방법 중 많이 사용되는 방법이며 베이지안 군집방법은 Bernardo와 Giron (1988)이 군집에 대한 가중치 확률만 모를 경우 처음 적용하였다. 우리는 이 연구에서 일반적인 선형모형의 유한혼합물이 아닌 군집특정(cluster-specific) 변량효과를 모형에 포함하여 베이지안 분석방법인 깁스표집법(Gibbs sampling)을 사용한다. 제안한 모형의 특성 및 표집법에 대하여 설명하였고 모의실험 및 실제 데이터 분석을 통하여 모형의 유용성을 파악하였다. Hurn 등 (2003)의 CO2 데이터에 모형을 적용하여 변량효과가 없는 모형, 개체특정(subject-specific) 변량효과 모형과 비교하였다.

Patterns of consonant deletion in the word-internal onset position: Evidence from spontaneous Seoul Korean speech

  • Kim, Jungsun;Yun, Weonhee;Kang, Ducksoo
    • 말소리와 음성과학
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    • 제8권1호
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    • pp.45-51
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    • 2016
  • This study examined the deletion of onset consonant in the word-internal structure in spontaneous Seoul Korean speech. It used the dataset of speakers in their 20s extracted from the Korean Corpus of Spontaneous Speech (Yun et al., 2015). The proportion of deletion of word-internal onset consonants was analyzed using the linear mixed-effects regression model. The factors that promoted the deletion of onsets were primarily the types of consonants and their phonetic contexts. The results showed that onset deletion was more likely to occur for a lenis velar stop [k] than the other consonants, and in the phonetic contexts, when the preceding vowel was a low central vowel [a]. Moreover, some speakers tended to more frequently delete onset consonants (e.g., [k] and [n]) than other speakers, which reflected individual differences. This study implies that word-internal onsets undergo a process of gradient reduction within individuals' articulatory strategies.

EHL과 경계 윤활의 혼합 개념에 의한 캠과 종동물의 접촉 현상에 대한 연구 (Study of Cam and Follower Contacts with the Mixed Concepts of EHL and Boundary Lubrication)

  • 장시열
    • Tribology and Lubricants
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    • 제15권4호
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    • pp.343-353
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    • 1999
  • The role of viscosity index improver's(Ⅶ) additives for modem engine lubrication is complex. Under the condition of atmosphere or low shear rate, the characteristics of Ⅶ added lubricant is verified and quoted frequently for mathematical model of lubricant behavior. However, recent research shows that added lubricant has the characteristics of shear thinning at high shear rate condition although it performs well enough over the whole range of working temperature. At high shear rate, they show significant decrease of apparent viscosity irrespective of temperature. Many experimental researches verify that Ⅶ added lubricant shows boundary film layer formation on the solid surface as well as shear thinning effect by its polymeric molecular characteristics. The intend of our research is to verify the effects of Ⅶ from the viewpoint of continuum mechanics, because conventional Reynolds'equation with only pressure-viscosity relation cannot fully predict the lubricant behavior under the Ⅶ added condition. In these aspects, Reynolds'equation of Newtonian fluid model lacks the reflection of real fluid behavior and there is no way to explain the non-linear characteristics of Ⅶ added lubricant. In this research, we mathematically modeled the Ⅶ added lubricant behaviors which are the characteristics of non-Newtonian fluid behavior at high shear rate and boundary film formation on the solid surface. The consideration of elastic deformation in the contact region is also included in our computation and finally the converged film pressure and the film thickness with elastic deformation are obtained. The results are compared with those of Newtonian fluid model.

The effect of missing levels of nesting in multilevel analysis

  • Park, Seho;Chung, Yujin
    • Genomics & Informatics
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    • 제20권3호
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    • pp.34.1-34.11
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    • 2022
  • Multilevel analysis is an appropriate and powerful tool for analyzing hierarchical structure data widely applied from public health to genomic data. In practice, however, we may lose the information on multiple nesting levels in the multilevel analysis since data may fail to capture all levels of hierarchy, or the top or intermediate levels of hierarchy are ignored in the analysis. In this study, we consider a multilevel linear mixed effect model (LMM) with single imputation that can involve all data hierarchy levels in the presence of missing top or intermediate-level clusters. We evaluate and compare the performance of a multilevel LMM with single imputation with other models ignoring the data hierarchy or missing intermediate-level clusters. To this end, we applied a multilevel LMM with single imputation and other models to hierarchically structured cohort data with some intermediate levels missing and to simulated data with various cluster sizes and missing rates of intermediate-level clusters. A thorough simulation study demonstrated that an LMM with single imputation estimates fixed coefficients and variance components of a multilevel model more accurately than other models ignoring data hierarchy or missing clusters in terms of mean squared error and coverage probability. In particular, when models ignoring data hierarchy or missing clusters were applied, the variance components of random effects were overestimated. We observed similar results from the analysis of hierarchically structured cohort data.

Full-arch accuracy of five intraoral scanners: In vivo analysis of trueness and precision

  • Kwon, Miran;Cho, Youngmok;Kim, Dong-Wook;Kim, MyungSu;Kim, Yoon-Ji;Chang, Minho
    • 대한치과교정학회지
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    • 제51권2호
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    • pp.95-104
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    • 2021
  • Objective: To evaluate the trueness and precision of full-arch scans acquired using five intraoral scanners and investigate the factors associated with the dimensional accuracy of the intraoral scan data. Methods: Nine adult participants (mean age, 34.3 ± 8.3 years) were recruited. Four zirconium spheres (Ø 6 mm) were bonded to the canines and the molars. Following acquisition of reference scans using an industrial-grade scanner, five intraoral scanners, namely i500, CS3600, Trios 3, iTero, and CEREC Omnicam, were used to scan the arches. Linear distances between the four reference spheres were automatically calculated, and linear mixed model analysis was performed to compare the trueness and precision of the intraoral scan data among the different scanners. Results: The absolute mean trueness and precision values for all intraoral scanners were 76.6 ± 79.3 and 56.6 ± 52.4 ㎛, respectively. The type of scanner and the measured linear distances had significant effects on the accuracy of the intraoral scan data. With regard to trueness, errors in the intermolar dimension and the distance from the canine to the contralateral molar were greater with Omnicam than with the other scanners. With regard to precision, the error in the linear distance from the canine to the molar in the same quadrant was greater with Omnicam and CS3600 than with the other scanners. Conclusions: The dimensional accuracy of intraoral scan data may differ significantly according to the type of scanner, with the amount of error in terms of trueness being clinically significant.

Dose-dependent effects of a microbial phytase on phosphorus digestibility of common feedstuffs in pigs

  • Almeida, Ferdinando N.;Vazquez-Anon, Mercedes;Escobar, Jeffery
    • Asian-Australasian Journal of Animal Sciences
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    • 제30권7호
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    • pp.985-993
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    • 2017
  • Objective: The objective of this study was to evaluate increasing doses of a novel microbial phytase (Cibenza Phytaverse, Novus International, St. Charles, MO, USA) on standardized total tract digestibility (STTD) of P in canola meal (CM), corn, corn-derived distiller's dried grains with solubles (DDGS), rice bran (RB), sorghum, soybean meal (SBM), sunflower meal (SFM), and wheat. Methods: Two cohorts of 36 pigs each (initial body weight = $78.5{\pm}3.7kg$) were randomly assigned to 2 rooms, each housing 36 pigs, and then allotted to 6 diets with 6 replicates per diet in a randomized complete block design. Test ingredient was the only dietary source of P and diets contained 6 concentrations of phytase (0, 125, 250, 500, 1,000, or 2,000 phytase units [FTU]/kg) with 0.4% of $TiO_2$ as a digestibility marker. Feeding schedule for each ingredient was 5 d acclimation, 5 d fecal collection, and 4 d washout. The STTD of P increased (linear or exponential $p{\leq}0.001$) with the inclusion of phytase for all ingredients. Results: Basal STTD of P was 37.6% for CM, 37.6% for corn, 68.6% for DDGS, 10.3% for RB, 41.2% for sorghum, 36.7% for SBM, 26.2% for SFM, and 55.1% for wheat. The efficiency of this novel phytase to hydrolyze phytate is best described with a broken-line model for corn, an exponential model for CM, RB, SBM, SFM, and wheat, and a linear model for DDGS and sorghum. Based on best-fit model the phytase dose (FTU/kg) needed for highest STTD of P (%), respectively, was 735 for 64.3% in CM, 550 for 69.4% in corn, 160 for 55.5% in SBM, 1,219 for 57.8% in SFM, and 881 for 64.0% in wheat, whereas a maximum response was not obtained for sorghum, DDGS and RB within the evaluated phytase range of 0 to 2,000 FTU/kg. These differences in the phytase concentration needed to maximize the STTD of P clearly indicate that the enzyme does not have the same hydrolysis efficiency among the evaluated ingredients. Conclusion: Variations in enzyme efficacy to release P from phytate in various feedstuffs need to be taken into consideration when determining the matrix value for phytase in a mixed diet, which likely depends on the type and inclusion concentration of ingredients used in mixed diets for pigs. The use of a fixed P matrix value across different diet types for a given phytase concentration is discouraged as it may result in inaccurate diet formulation.

Circadian Rhythms Characteristics of Nurses Providing Direct Patient Care: An Observational Study

  • Ilknur Dolu;Serap Acikgoz;Ali Riza Demirbas;Erdem Karabulut
    • Safety and Health at Work
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    • 제15권1호
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    • pp.102-109
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    • 2024
  • Background: In today's modern world, longer working hours, shift work, and working at night have become major causes of the disruption of our natural circadian rhythms. This study aimed to investigate the effects of the type of shift work (rotating vs. fixed day), duty period (on-duty vs. off-duty), and working period within each shift (nighttime vs. daytime) on the circadian rhythm characteristics of nurses who provide direct patient care. Methods: This cross-sectional study used a purposive sampling method. Cosinor analysis was applied to analyze the actigraphy data of nurses providing direct patient care for seven consecutive days. The linear mixed effects model was then used to determine any variances between shift type, duty period, and working period within each shift for the nurses. Results: The mesor value did not differ according to nurses' shift type, duty period, and working period within each shift. The amplitude was statistically higher in on-duty nurses and in daytime working hours. The acrophase was significantly delayed in nighttime working hours. As well as nurses in rotating shift had experience. Conclusion: Our findings revealed that the peak activity of nurses occurs significantly later at night while working and nurses working during nighttime hours may have a weaker or less distinct circadian rhythm. Thus, this study suggests that limits be placed on the number of rotating nighttime shifts for nurses.

An empirical bracketed duration relation for stable continental regions of North America

  • Lee, Jongwon;Green, Russell A.
    • Earthquakes and Structures
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    • 제3권1호
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    • pp.1-15
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    • 2012
  • An empirical predictive relationship correlating bracketed duration to earthquake magnitude, site-to-source distance, and local site conditions (i.e. rock vs. stiff soil) for stable continental regions of North America is presented herein. The correlation was developed from data from 620 horizontal motions for central and eastern North America (CENA), consisting of 28 recorded motions and 592 scaled motions. The bracketed duration data was comprised of nonzero and zero durations. The non-linear mixed-effects regression technique was used to fit a predictive model to the nonzero duration data. To account for the zero duration data, logistic regression was conducted to model the probability of zero duration occurrences. Then, the probability models were applied as weighting functions to the NLME regression results. Comparing the bracketed durations for CENA motions with those from active shallow crustal regions (e.g. western North America: WNA), the motions in CENA have longer bracketed durations than those in the WNA. Especially for larger magnitudes at far distances, the bracketed durations in CENA tend to be significantly longer than those in WNA.

수종의 화학소독제에 침적시킨 고무인상체의 크기안정성에 관한 연구 (A STUDY ON DIMENSIONAL STABILITY OF THE RUBBER IMPRESSION MATERIALS FOLLOWING IMMERSION WITH CHEMICAL DISINFECTANTS)

  • 김형식;김창회
    • 대한치과보철학회지
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    • 제27권2호
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    • pp.249-259
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    • 1989
  • Dental impression materials often become contaminated with patients' saliva and blood which creates the potential for cross-infection. It was the purpose of this study to investigate the effects of disinfection of three different rubber impression materials with four different disinfecting solutions. Polysulfide, vinyl polysiloxane and polyether impression materials were mixed according to the manufacturer's directions and samples were formed on a stainless steel model. On removal from the standard model, impressions were immersed in a disinfectant (acid-potentiated glutaraldehyde, phenollic compound, chlorine compound, iodophor) at room tempera tures for ten minutes. After disinfection, the distance between reference points(linear dimension) was measured using the non-contact automatic cordinate measuring projector(MZ-1, Nikon). Through statistical analyses on the data from this study,. the following conclusions were obtained. 1. Polysulfide, vinyl polysiloxane impressions were disinfected without dimensional change.(p>0.05) 2. Polyether impressions which were immersed in acid-potentiated glutaraldehyde were statistically different from control group.(p<0.05) But the amount of shrinkage(0.04%) would not be clinically significant. 3. By immersion of polysulfide, vinyl polysiloxane, polyether impressions in Banicide, Biocide, Multicide plus, sodium hypochlorite for ten minutes, clinically accurate impressions were obtained without dimensional change.

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Association Analysis of Charcoal Rot Disease Resistance in Soybean

  • Ghorbanipour, Ali;Rabiei, Babak;Rahmanpour, Siamak;Khodaparast, Seyed Akbar
    • The Plant Pathology Journal
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    • 제35권3호
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    • pp.189-199
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    • 2019
  • In this research, the relationships among the 31 microsatellite markers with charcoal rot disease resistance related indices in 130 different soybean cultivars and lines were evaluated using association analysis based on the general linear model (GLM) and the mixed linear model (MLM) by the Structure and Tassel software. The results of microsatellite markers showed that the genetic structure of the studied population has three subpopulations (K=3) which the results of bar plat also confirmed it. In association analysis based on GLM and MLM models, 31 and 35 loci showed significant relationships with the evaluated traits, respectively, and confirmed considerable variation of the studied traits. The identified markers related to some of the studied traits were the same which can probably be due to pleiotropic effects or tight linkage among the genomic regions controlling these traits. Some of these relationships were including, the relationship between Sat_252 marker with amount of charcoal rot disease, Satt359, Satt190 and Sat_169 markers with number of microsclerota in stem, amount of charcoal rot disease and severity of charcoal rot disease, Sat_416 marker with number of microsclerota in stem and amount of charcoal rot disease and the Satt460 marker with number of microsclerota in stem and severity of charcoal rot disease. The results of this research and the linked microsatellite markers with the charcoal rot disease-related characteristics can be used to identify the suitable parents and to improve the soybean population in future breeding programs.