• 제목/요약/키워드: isolated set

검색결과 278건 처리시간 0.025초

Light-regulated Translation of Chloroplast Reaction Center Protein D1 mRNA in Chlamydomonas reinhardtii

  • Kim, Jungmook
    • 한국식물학회:학술대회논문집
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    • 한국식물학회 1999년도 제13회 식물생명공학심포지움 New Approaches to Understand Gene Function in Plants and Application to Plant Biotechnology
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    • pp.57-62
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    • 1999
  • Light-regulated translation of chloroplast mRNAs requires nuclear-encoded trans-acting factors that interact with the 5' untranslated region (UTR) of these mRNAs. A set of four proteins (60, 55, 47, and 38 kDa) that bind to the 5'-UTR of the psbA mRNA had been identified in C. reinhardtii. 47 kDa protein (RB47) was found to encode a chloroplast poly (A)-binding protein (cPABP) that specifically binds to the 5'-UTR of the psbA mRNA, and essential for translation of this mRNA, cDNA encoding 60 kDa protein (RB60) was isolated, and the amino acid sequence of the encoded protein was highly homologous to plants and mammalian protein disulfide isomerases (PDI), normally found in the endoplasmic reticulum (ER). Immunoblot analysis of C. reinhardtii proteins showed that anti-PDI recognized a distinct protein of 56 kDa in whole cell extract, whereas anti-rRB60 detected a 60 kDa protein. The ER-PDI was not retained on heparin-agarose resin whereas RB60 was retained. In vitro translation products of the RB60 cDNA can be transported into C. reinhardtii chloroplast in vitro. Immunoblot analysis of isolated pea chloroplasts indicated that higher plant also possess a RB60 homolog. In vitro RNA-binding studies showed that RB60 modulates the binding of cPABP to the 5'-UTR of the psbA mRNA by reversibly changing the redox status of cPABP using redox potential or ADP-dependent phosphorylation. Site-directed mutagenesis of -CGHC- catalytic site in thioredoxin-like domain of RB60 is an unique PDI located in the chloroplast of C. reinhardtii, and suggest that the chloroplast PDI may have evolved to utilize the redox-regulated thioredoxin like domain as a mechanism for regulating the light-activated translation of the psbA mRNA.

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북한산국립공원의 식생개관

  • 임양재
    • 한국식물학회:학술대회논문집
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    • 한국식물학회 1985년도 워크샵 및 심포지엄 북한산국립공원의 식생
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    • pp.7-18
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    • 1985
  • Light-regulated translation of chloroplast mRNAs requires nuclear-encoded trans-acting factors that interact with the 5' untranslated region (UTR) of these mRNAs. A set of four proteins (60, 55, 47, and 38 kDa) that bind to the 5'-UTR of the psbA mRNA had been identified in C. reinhardtii. 47 kDa protein (RB47) was found to encode a chloroplast poly (A)-binding protein (cPABP) that specifically binds to the 5'-UTR of the psbA mRNA, and essential for translation of this mRNA, cDNA encoding 60 kDa protein (RB60) was isolated, and the amino acid sequence of the encoded protein was highly homologous to plants and mammalian protein disulfide isomerases (PDI), normally found in the endoplasmic reticulum (ER). Immunoblot analysis of C. reinhardtii proteins showed that anti-PDI recognized a distinct protein of 56 kDa in whole cell extract, whereas anti-rRB60 detected a 60 kDa protein. The ER-PDI was not retained on heparin-agarose resin whereas RB60 was retained. In vitro translation products of the RB60 cDNA can be transported into C. reinhardtii chloroplast in vitro. Immunoblot analysis of isolated pea chloroplasts indicated that higher plant also possess a RB60 homolog. In vitro RNA-binding studies showed that RB60 modulates the binding of cPABP to the 5'-UTR of the psbA mRNA by reversibly changing the redox status of cPABP using redox potential or ADP-dependent phosphorylation. Site-directed mutagenesis of -CGHC- catalytic site in thioredoxin-like domain of RB60 is an unique PDI located in the chloroplast of C. reinhardtii, and suggest that the chloroplast PDI may have evolved to utilize the redox-regulated thioredoxin like domain as a mechanism for regulating the light-activated translation of the psbA mRNA.

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한국의 지반거동을 고려한 교량과 송전철탑의 지진취약도 분석 (Seismic Fragilities of Bridges and Transmission Towers Considering Recorded Ground Motions in South Korea)

  • 박효상;응웬 두이-두안;이태형
    • 한국지진공학회논문집
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    • 제20권7_spc호
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    • pp.435-441
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    • 2016
  • The Korean peninsula has known as a minor-to-moderate seismic region. However, some recent studies had shown that the maximum possible earthquake magnitude in the region is approximately 6.3-6.5. Therefore, a seismic vulnerability assessment of the existing infrastructures considering ground motions in Korea is necessary. In this study, we developed seismic fragility curves for a continuous steel box girder bridge and two typical transmission towers, in which a set of seven artificial and natural ground motions recorded in South Korea is used. A finite element simulation framework, OpenSees, is utilized to perform nonlinear time history analyses of the bridge and a commercial software, SAP2000, is used to perform time history analyses of the transmission towers. The fragility curves based on Korean ground motions were then compared with the fragility curves generated using worldwide ground motions to evaluate the effect of the two ground motion groups on the seismic fragility curves of the structures. The results show that both non-isolated and base-isolated bridges are less vulnerable to the Korean ground motions than to worldwide earthquakes. Similarly to the bridge case, the transmission towers are safer during Korean motions than that under worldwide earthquakes in terms of fragility functions.

Penicillium islandicum에 의한 황변미독(黃變米毒) Luteoskyrin의 생성(生成) (Formation of Luteoskyrin by Penicillium islandicum)

  • 김용화;이서래
    • 한국식품과학회지
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    • 제10권1호
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    • pp.46-51
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    • 1978
  • 황변미독(黃變米毒)의 일종인 luteoskyrin의 동정(同定) 및 정량법(定量法)을 검토한 후 변질미에서 분리된 Pen. islandicum의 luteoskyrin 생성능(生成能)을 추구한 결과는 다음과 같다. 1) Luteoskyrin은 0.5 N oxalic acid impregnated silicagel G plate로서 acetone : n-hexane : water(6:3:1.5, upper layer)를 전개용매로하는 TLC방법에서 분리(分離)가 가장 좋았다. 분리된 황색물질의 최대흡수파장(吸收波長)은 426, 448nm이었으며 chromatogram을 태양광선에 $2{\sim}3$시간 노출시 자색(紫色)으로 변하였다. 2) Luteoskyrin의 정량법으로서 TLC전개(展開)후 용출비색법(溶出比色法)에서는 4 ppm, densitometry에서는 0.1 ppm이 검출한계(檢出限界)이었다. 미곡 중의 허용량(許容量)을 3.68 ppm이하로 정설할 경우 곡류시료 중 luteoskyrin의 검색(檢索)에는 densitometry가 적합할 것이다. 3) Pen. islandicum에 의한 luteoskyrin 생성능은 Czapek 액체배지에서는 균계체(菌系體) 1g당 11mg, 가압살균한 쌀에서는 1g당 40mg이었다.

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Characterization of Veterinary Hospital-Associated Isolates of Enterococcus Species in Korea

  • Chung, Yeon Soo;Kwon, Ka Hee;Shin, Sook;Kim, Jae Hong;Park, Yong Ho;Yoon, Jang Won
    • Journal of Microbiology and Biotechnology
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    • 제24권3호
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    • pp.386-393
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    • 2014
  • Possible cross-transmission of hospital-associated enterococci between human patients, medical staff, and hospital environments has been extensively studied. However, limited information is available for veterinary hospital-associated Enterococcus isolates. This study investigated the possibility of cross-transmission of antibiotic-resistant enterococci between dog patients, their owners, veterinary staff, and hospital environments. Swab samples (n=465) were obtained from five veterinary hospitals in Seoul, Korea, during 2011. Forty-three Enterococcus strains were isolated, representing seven enterococcal species. E. faecalis and E. faecium were the most dominant species (16 isolates each, 37.2%). Although slight differences in the antibiotic resistance profiles were observed between the phenotypic and the genotypic data, our antibiogram analysis demonstrated high prevalence of the multiple drug-resistant (MDR) isolates of E. faecalis (10/16 isolates, 62.5%) and E. faecium (12/16 isolates, 75.0%). Pulsed-field gel electrophoretic comparison of the MDR isolates revealed three different clonal sets of E. faecalis and a single set of E. faecium, which were isolated from different sample groups or dog patients at the same or two separate veterinary hospitals. These results imply a strong possibility of cross-transmission of the antibiotic-resistant enterococcal species between animal patients, owners, veterinary staff, and hospital environments.

Ralstonia pseudosolanacearum에 의한 땅콩 풋마름병 발생 보고 (First Report of Bacterial Wilt by Ralstonia pseudosolanacearum on Peanut in Korea)

  • 최수연;김남구;김상민;이봉춘
    • 식물병연구
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    • 제28권1호
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    • pp.54-56
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    • 2022
  • 2021년 7월, 고창 땅콩 재배포장에서 시들음 증상을 보이는 땅콩 지상부를 발견하였다. 병징은 잎이 갈색으로 시들어 말라 죽은 것처럼 보였으며, 채집한 식물체의 지제부를 잘라 표면소독 후 멸균수에 넣었을 때 ooze 현상을 관찰하였다. 땅콩에서 순수분리된 병원균은 16s rRNA 유전자 염기서열과 phylotype 분류, 유연관계 분석을 통해 분리된 균주가 Ralstonia pseudosolanacearum이라는 것을 확인하였다. 현재까지 국내에 보고된 풋마름병은 고추, 토마토, 감자 등을 기주로 발생한다고 알려져 있다. 본 연구는 국내 처음으로 R. pseudosolanacearum에 의해 발생한 땅콩 풋마름병을 보고하고자 한다.

녹차 열수추출물이 동$\cdot$식물성 단백질과 고콜레스테롤을 급여한 흰쥐의 지질대사와 항산화효과에 미치는 영향 (Effects of Hot Water Soluble Extract from Green Tea on the Lipid Metabolism and Antioxidant Effect in Rats fed Animal or Vegetable Protein and a Hypercholesterol Diet)

  • 원향례;이승교;박동연
    • 한국지역사회생활과학회지
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    • 제16권4호
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    • pp.39-45
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    • 2005
  • 본 연구는 동, 식물성 단백질 식이에 고콜레스테롤을 공급한 식이와 열수 추출한 녹차급여가 지질대사와 항산화계에 미치는 효과를 알아보고자 한국 사람들이 보통 전통차로 음용하는 조건인 $0.5\%$ 녹차열수 추출물을 동물성 단백질인 카제인,식품성 단백질인 대두 단백질과 고콜레스테롤을 체중이 약 180g이 되는 Sprague-Dawley종 수 컷 흰쥐에 공급하여 지방대사와 항산화계에 미치는 영향을 보고자하였다. 4주간 실험식이로 사육한 후 혈청지질성분과, 간의 지질성분, 간의 항산화 효소 활성과 과산화물인 TBARS의 양을 측정하였다. 그 결과는 다음과 같다. 1. 체중증가량과 FER은 전반적으로 대두단백질 군보다 카제인 군이 높았고 카제인 군에서는 녹차열수추출물을 공급하였을 때 체중증가량과 FER이 유의적으로 감소하였다(P < 0.05). 식이섭취량은 유의적인 차이를 보이지 않았다. 2. 혈청 중의 총콜레스테롤, LDL-콜레스테롤 농도는 전반적으로 대두단백질 군보다 카제인 군이 높았으나 카제인군의 LDL-콜레스테롤 농도만이 녹차열수추출물을 공급하엿을 때 유의하게 낮게 나타났다(P < 0.05). 3. 간의 중성지방 함량은 전반적으로 대두단백질 군보다 카제인 군이 높았으나 녹차열수추출물을 공급했을 때 대두단백질 군에서만 중성지방 함량이 유의하게 낮게 나타났다(P < 0.05). 4. 간의 항산화효소의 활성은 모든 군에서 유의한 차이가 없었으나 TBARS 함량은 녹차열수추출물을 공급했을 때 카제인 군에서만 유의하게 낮게 나타났다(P < 0.05). 이결과로 보면 식물성 단백질군 보다는 동물성 단백질군에 녹차 열수 추출물을 공급하였을 때 사료효율, 체중감소, 혈청 LDL-콜레스테롤과 간의 TBARS(thiovarbituric acid reactivesubstance) 생성을 낮추는 효과를 보여주었다. 간의 중성지방의 경우는 대두단백질 군에서만 녹차열수추물 공급에 따라 낮아지는 효과가 있었다(P < 0.05). 그러므로 녹차 열수 추출물이 지방대사와 항산화계에 미치는 영향은 식물성단백질 보다는 동물성 단백질이 공급된 식이에 건강에 바람직한 영향을 미치는 것으로 나타났다.

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Serosurveillance and establishment of a reverse transcription-polymerase chain reaction assay for bovine parainfluenza virus type 5

  • Yang, Dong-Kun;Choi, Sung-Suk;Lee, Beom-Joo;Kim, Ha-Hyun;Jo, Hyun-Ye
    • 대한수의학회지
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    • 제55권3호
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    • pp.185-189
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    • 2015
  • Bovine parainfluenza virus type 5 (bPIV5) was isolated from cattle with downer cow syndrome in 2012, and included both respiratory and neurotropic pathogens from a variety of animals. In the current study, we conducted serosurveillance using sera obtained from seven Korean farms and optimized a reverse transcription-polymerase chain reaction (RT-PCR) assay to detect bPIV5. The overall seropositive rate for Korean cattle was 21.4% (163/760). A farm located near the city of Milyang in Gyeoungnam province had a markedly elevated seropositive rate for bPIV5 compared to that of the other six farms. The regional seropositive rates were 4.2% (8/192) for Haman, 19.5% (18/55) for Hwasung, 73.9% (65/88) for Milyang, 26.0% (50/192) for Namwon, 1.0% (1/96) for Uljin, 13.5% (13/96) for Yeongju, and 32.7% (8/41) for Yongin. The sensitivity and specificity of three RT-PCR primer sets used to amplify the conserved fusion gene of bPIV5 were also evaluated. An RT-PCR assay using the bPIVFR3 primer set was 10-fold more sensitive than the assays using the two other primer sets and did not result in non-specific amplification. These results demonstrated that the bPIFR3 primer set can be used to detect bPIV5.

Development of PCR and TaqMan PCR Assays to Detect Pseudomonas coronafaciens, a Causal Agent of Halo Blight of Oats

  • An, Ji-Hye;Noh, Young-Hee;Kim, Yong-Eon;Lee, Hyok-In;Cha, Jae-Soon
    • The Plant Pathology Journal
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    • 제31권1호
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    • pp.25-32
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    • 2015
  • Pseudomonas coronafaciens causes halo blight on oats and is a plant quarantine bacterium in many countries, including the Republic of Korea. Using of the certificated seed is important for control of the disease. Since effective detection method of P. coronafaciens is not available yet, PCR and TaqMan PCR assays for specific detection of P. coronafaciens were developed in this study. PCR primers were designed from the draft genome sequence of P. coronafaciens LMG 5060 which was obtained by the next-generation sequencing in this study. The PCR primer set Pc-12-F/Pc-12-R specifically amplified 498 bp from the 13 strains of P. coronafaciens isolated in the seven different countries (Canada, Japan, United Kingdom, Zimbabwe, Kenya, Germany, and New Zealand) and the nested primer set Pc-12-ne-F/Pc-12-ne-R specifically amplified 298 bp from those strains. The target-size PCR product was not amplified from the non-target bacteria with the PCR and nested primer sets. TaqMan PCR with Pc-12-ne-F/Pc-12-ne-R and a TaqMan probe, Pc-taqman, which were designed inside of the nested PCR amplicon, generated Ct values which in a dose-dependent manner to the amount of the target DNA and the Ct values of all the P. coronafaciens strains were above the threshold Ct value for positive detection. The TaqMan PCR generated positive Ct values from the seed extracts of the artificially inoculated oat seeds above 10 cfu/ml inoculation level. PCR and TaqMan PCR assays developed in this study will be useful tools to detect and identify the plant quarantine pathogen, P. coronafaciens.

플루오르화메탄들과 암모니아 및 물과의 수소결합 이량체들에 관한 Ab Initio 연구 (Ab Initio Studies on Hydrogen-Bonded Dimers of Fluoromethanes with Ammonia and Water)

  • 이순기;김승훈
    • 대한화학회지
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    • 제37권4호
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    • pp.408-415
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    • 1993
  • $CH_4,\;CH_3F,\;CH_2F_2,\;CHF_3$$NH_3$H_2O$와의 수소결합 이량체들에 대하여 9s5p/5s 및 9s5p1d/5s1p의 basis sets를 사용하여 체계적인 ab initio 계산을 하였다. 이들 이량체들의 바닥상태성질을 구하여 독립된 단위체들의 대응하는 성질과 비교하였으며, 평형기하구조, 안정화에너지, 쌍극자모멘트 및 분자간 결합의 힘상수 등을 보고하였다. 사슬형 소중합체들에서 수소결합의 비가감적 거동의 결과로부터 일어나는 여러가지 효과들을 논의하고, SCF 근사법의 사용에 따른 체계적 및 조직적인 오차들과 계산결과들의 basis sets 의존성을 지적하였다.

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