• Title/Summary/Keyword: insertion sequence

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Operation Test of Control Element Drive Mechanism Using a Power Controller (전력제어기를 이용한 제어봉 구동장치 동작시험)

  • Kim, Choon-Kyung;Lee, Jong-Moo;Jeong, Soon-Hyun;Cheon, Jong-Min;Kweon, Soon-Man
    • Proceedings of the KIEE Conference
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    • 2004.11c
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    • pp.741-743
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    • 2004
  • In this paper, we describe a Control Element Drive Mechanism(CEDM) operation test using a Power Controller. By testing, we can catch the mechanical and electrical characteristics of CEDM and obtain the information about the improvement of CEDM and the design of CEDM power cabinet. The power controller for CEDM introduced in this paper can input firing angles directly into gate drive circuits of thyristors so that this method can be used to derive the maximum and minimum values of firing angles within available limits for a 3-phase half-wave rectifier. Angle inputs help us understand each coil's response characteristics. Since this power controller generates a serial sequence for CEDM insertion and withdrawal operations, we may judge whether CEDM works correctly as expected or not in each phase of a step movement.

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Inhibition of Sma I, Ava I, Nae I, and Xma I endonuclease activities by the methylation of DNA with Hpa II methylase (제한효소 Sma I, Xma I, AVa I, Nae I의 DNA절단반응에 있어서 Hpa II methylation의 억제효과)

  • 최우성;강선철;서정선;유욱준
    • Korean Journal of Microbiology
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    • v.24 no.2
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    • pp.86-90
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    • 1986
  • The DNA methylated by Hpa II methylase was not cleaved by Sma, I, Ava I and Nae I endonucleases. This experimental data could be interpreted as strong evidences that Sma I, Ava I and Nae I methylases which yet to be isolated would methylate on the inmost cytosine nucleotide within their hexameric recognition sequences. The facts that Sma I, Ava I and Nae I endonucleases can not cleave the DNA methylated by Hpa II methylase are the valuable informations for protecting DNAs upon cleavage reactions by Sma I, Ava I and NAe I endonucleases especially for cDNA insertion experiments into vector DNAs using Sma I, Ava I and Nae I oligonucleotide linkers. In the case of Xma I endonuclease, partially cleaved DNA fragments were observed although the reaction rate was greatly decreased. This result implies that the methylation site of Xma I methylase which yet to be isolated would not be the same as that of Hpa II methylase in Xma I sequence.

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Growth-Suppressing Activity of the Transfected Cx26 on BICR-M1Rk Breast Cancer Cell Line

  • Lee, Hae-Jung;Rhee, Seung-Keun
    • Journal of Microbiology and Biotechnology
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    • v.21 no.5
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    • pp.477-482
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    • 2011
  • There are accumulating evidences suggesting that connexin (Cx), a gap junction channel-forming protein, acts as a growth suppressor in various cancer cells, and this effect is attributeed to the gap junction-mediated intercellular communication (GJIC). In order to characterize the relationship between the growth-arresting activity of Cx26 and its cytoplasmic localizations after expression, we linked a nuclear export signal (NES) sequence to Cx26 cDNA before transfecting into a rat breast cancer cell line. A confocal fluorescent microscopic observation revealed that the insertion of NES minimized the nuclear expression of Cx26, and increased its cytoplasmic expression, including plasma membrane junctions. Total cell counting and BrdUrd-labeling experiments showed that the growth of the breast cancer cells was inhibited by 74% upon transfection of Cx26-NES, whereas only 9% inhibition was observed with only Cx26 cDNA.

Genetic and Functional Analyses of the DKxanthene Biosynthetic Gene Cluster from Myxococcus stipitatus DSM 14675

  • Hyun, Hyesook;Lee, Sunjin;Lee, Jong Suk;Cho, Kyungyun
    • Journal of Microbiology and Biotechnology
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    • v.28 no.7
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    • pp.1068-1077
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    • 2018
  • DKxanthenes are a class of yellow secondary metabolites produced by myxobacterial genera Myxococcus and Stigmatella. We identified a putative 49.5 kb DKxanthene biosynthetic gene cluster from Myxococcus stipitatus DSM 14675 by genomic sequence and mutational analyses. The cluster consisted of 15 genes (MYSTI_06004-MYSTI_06018) encoding polyketide synthases, non-ribosomal peptide synthases, and proteins with unknown functions. Disruption of the genes by plasmid insertion resulted in defects in the production of yellow pigments. High-performance liquid chromatography and liquid chromatography-tandem mass spectrometry analyses indicated that the yellow pigments produced by M. stipitatus DSM 14675 might be novel DKxanthene derivatives. M. stipitatus did not require DKxanthenes for the formation of heat-resistant viable spores, unlike Myxococcus xanthus. Furthermore, DKxanthenes showed growth inhibitory activity against the fungi Aspergillus niger, Candida albicans, and Rhizopus stolonifer.

A Comparative Reliability Evaluation of Rod Control Mechanisms with Corresponding for Nuclear Power Plants (원전용 제어봉구동장치의 해석적인 신뢰성 비교 평가)

  • Kwon, S.;Ahn, J.B.;Cheon, J.M.;Lee, J.M.;Shin, J.R.
    • Proceedings of the KIEE Conference
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    • 2002.07d
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    • pp.2646-2648
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    • 2002
  • This paper deals with a comparative evaluation of the reliability of control rod drive mechanisms including their driving methods for nuclear power plants. Basically there exist two types of electromagnetic-jack-type drive mechanisms in commercial use that are called as Control Rod Drive Mechanism and Control Element Drive Mechanism. Each type has corresponding drive sequence to make the movements of insertion and withdrawal. A state-space model is derived for each model graphically. Then the evaluation of the reliability is carried out on the programming tool called SHARPE. The evaluation does not give any meaningful numerical values for the reliability but just shows a relative degree to each other in view of reliability.

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Tissue Specific Gene Regulation of The Anthocyanin Synthesis Regulator Gene R in Maize (옥수수의 색소 발현에 관련된 조직 특이성 조절유전자 R locus에 관하여)

  • 임용표
    • Proceedings of the Botanical Society of Korea Conference
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    • 1987.07a
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    • pp.323-347
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    • 1987
  • The R locus of maize in one of several genes that regulate the anthocyanin pigments throughout the body of the plant and seed. The R gene product may regulate pigment deposition by controlling the expression of the flavonoid biosynthetic gene pathway in a tissue-specific manner. To understand the basis for tissue specific regulation and allelic variation at R, the molecular study has been done by cloning a portion of the R complex by transposon tagging with Ac. R specific probe were cloned from the R-nj mutant induced by Ac insertion mutagenesis. From southern analysis of R-r complex using the R-nj probe, the structure of R-r was proposed that R-r containes the three elements, (P)(Q)(S). These elements may organize as the inversion triplication model which (S) sequence was inverted in relation to (P) and (Q). The R-sc derivated from R-mb or R-nj was cloned with R-nj probe, and molecular genetical data showed that R-sc containes tissue specific and tissue nonspecific area, and the sequencing of R-sc are progressed now.

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Rich Transcription Generation Using Automatic Insertion of Punctuation Marks (자동 구두점 삽입을 이용한 Rich Transcription 생성)

  • Kim, Ji-Hwan
    • MALSORI
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    • no.61
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    • pp.87-100
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    • 2007
  • A punctuation generation system which combines prosodic information with acoustic and language model information is presented. Experiments have been conducted first for the reference text transcriptions. In these experiments, prosodic information was shown to be more useful than language model information. When these information sources are combined, an F-measure of up to 0.7830 was obtained for adding punctuation to a reference transcription. This method of punctuation generation can also be applied to the 1-best output of a speech recogniser. The 1-best output is first time aligned. Based on the time alignment information, prosodic features are generated. As in the approach applied in the punctuation generation for reference transcriptions, the best sequence of punctuation marks for this 1-best output is found using the prosodic feature model and an language model trained on texts which contain punctuation marks.

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Origin-related study of genetic diversity and heteroplasmy of Mongolian sheep (Ovis aries) using mitochondrial DNA

  • Kim, Yi Seul;Tseveen, Khaliunaa;Batsukh, Badamsuren;Seong, Jiyeon;Kong, Hong Sik
    • Journal of Animal Reproduction and Biotechnology
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    • v.35 no.2
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    • pp.198-206
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    • 2020
  • Food and agricultural production sector, especially livestock production is vital for Mongolia's economic and social development. Domestic sheep play key roles for Mongolians, providing food (meat, milk) and raw materials (wool, sheepskin), but genetic diversity, origin of sheep populations in Mongolia have not been well studied. Studies of population genetic diversity is important research field in conservation and restoration of animal breeds and genetic resources. Therefore, this study aimed to investigate genetic characteristics and estimate origin through the analysis of mitochondrial DNA control region D-loop and Cytochrome b of Mongolian indigenous sheep (Mongolian native, Orkhon and Altanbulag) and one Europe sheep (Suffolk). As a result of there were found, 220 SNPs (Single nucleotide polymorphism) in the D-loop region, 28 SNPs in the Cytochrome B region, furthermore, 77 Haplotypes. The nucleotide diversity was only found in D-loop region (n = 0.0184). Phylogenetic analysis showed that 3 (A, B, and C) of 5 haplogroups of sheep have been identified in our research. Haplogroup C was only found in Mongolian indigenous sheep. Haplogroup D and E were not observed. As a result of haplogroups, haplogroup A was dominant (n = 46 of 94 sheeps), followed by haplogroup B (n = 36) and haplogroup C (n = 12). Sequence analysis showed that T deletion, insertion and heteroplasmy in D-loop region occurred at a high rate in Mongolian indigenous sheep population (T insertion = 47, T deletion = 83). The heteroplasmy, which has never been found in Mongolian sheep, has been newly discovered in this study. As a result, the Mongolian sheep varieties, which mainly derived from Asia, were in hybridization with European sheep varieties.

Development of Molecular Markers for Alternative Oxidase Synthesis Genes in Brassica rapa L. (배추 alternative oxidase 합성 유전자와 연관된 분자마커 개발)

  • Jeong, Ye-Sol;Chung, Sang-Min
    • Journal of Life Science
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    • v.20 no.2
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    • pp.208-212
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    • 2010
  • The low and high temperature stress might affect the yield and quality of many crop species. Alternative oxidase (AOX) gene is known as factors related to stress resistance in plants. In order to develop molecular markers related to stress resistance in Chinese cabbage, fifteen ESTs sharing sequence similarity to arabidopsis AOX genes were found using Brassica rapa EST database from NCBI. The polymorphic DNA sequences using the ESTs were then screened between Chinese cabbage, 'Chiifu' and 'Kenshin'. We found four ESTs that have either insertion or deletion between the two cultivars. These polymorphic sites were then targeted for development of the four PCR based molecular markers. These molecular markers developed in this study could be useful for a test of their relationship with abiotic stress resistance in Chinese cabbage.

Rapid diagnosis of bovine tuberculosis in slaughter cattle using PCR (PCR 기법을 이용한 도축 소의 결핵병 신속진단)

  • Koh, Ba-Ra-Da;Kim, Hyun-Joong;Park, Duk-Woong;Park, Seong-Do;Kim, Jae-Ik;Park, Jong-Tae;Kim, Yong-Hwan
    • Korean Journal of Veterinary Service
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    • v.30 no.3
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    • pp.393-406
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    • 2007
  • Bovine tuberculosis is an important zoonosis worldwide. Mycobacterium bovis, the causative agent of this disease in cattle, is also a pathogen for humans and several economically important animals. The cases of tuberculosis are reported in two cow found at slaughter house located in Gwangju city. Histopathologically, in the lymph nodes, granulomas consisted of large areas of necrosis surrounded by variable thick bands of cellular infiltrate containing macrophages, Langhans-type multinucleated giant cells and lymphocytes. Lesions in the lung followed the same developmental pattern as did lesions in the lymph nodes with some exceptions. With the acid-fast staining, numerous mycobacteria were revealed in the lung and lymph nodes. M bovis was confirmed as a causative agent in these cattle using bacterial isolation and PCR and restriction fragment length polymorphism method based on a unique 12.7 kb fragment insertion sequence from the Mycobacterium tuberculosis genome and the pncA polymorphism, The insertion element IS6110 and IS1081 were present M bovis isolated from lungs and lymph nodes of cattle using PCR assay. These cases are interesting and important in public health aspect that M bovis-infected cattle were found during a routine post-mortem inspection at slaughter house.