• The Korean Journal of Mycology
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• v.51 no.2
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• pp.121-125
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• 2023

In this study, we examined the ectomycorrhiza (ECM) formed by a species of the genus Tuber, T. koreanum, with two indigenous Korean oak species, Quercus acutissima and Q. dentata. T. koreanum showed a high colonization rate for both oak species, with a higher mean colonization rate observed for Q. acutissima. The mycorrhizal characteristics of T. koreanum were described, revealing distinct morphological and anatomical differences between the ECM formed with the two host plants. This study is significant because it is the first to elucidate ECM formations of T. koreanum in indigenous oak trees. However, further studies are required to differentiate the ECM associations formed by T. koreanum from those of other Tuber species.

• Journal of Species Research
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• v.10 no.1
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• pp.12-22
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• 2021

During a comprehensive investigation of indigenous prokaryotic species in Korea, 25 and 10 bacterial strains assigned to the classes Alphaproteobacteria and Betaproteobacteria, respectively, were isolated from diverse environmental habitats, including soil, mud, tidal field, sea water, sand, rusted iron, and leaf. Based on their high 16S rRNA gene sequence similarities (>98.7%) and the formation of robust phylogenetic clades with type species, each strain was assigned to an independent and predefined bacterial species. Since there were no published or official reports regarding these 35 isolates in Korea, they - 25 species of 14 families in the 5 orders of Alphaproteobacteria and 10 species of 3 families in the two orders of Betaproteobacteria - have been reported as unrecorded species in Korea. In addition, Gram reaction, colony and cell morphology, basic biochemical characteristic, isolation source, and strain ID of each species are also described in the species description sections.

• Journal of Species Research
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• v.10 no.3
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• pp.191-200
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• 2021

To study the biodiversity of bacterial species, here we report indigenous prokaryotic species of Korea. A total of 23 bacterial strains affiliated to the class Alphaproteobacteria were isolated from various environmental sources including seaweeds, seawater, fresh water, wetland/marsh, tidal sediment, plant roots, sewage and soil. Considering higher than 98.8% 16S rRNA gene sequence similarities and formation of a well-defined phylogenetic clade with named species, it was confirmed that each strain belonged to the predefined bacterial species of the class Alphaproteobacteria. There is no official report of these 23 species in Korea; 20 species of 16 genera (Mameliella, Yangia, Paracoccus, Ruegeria, Loktanella, Phaeobacter, Dinoroseobacter, Tropicimonas, Lutimaribacter, Litoreibacter, Sulfitobacter, Roseivivax, Labrenzia, Hyphomonas, Maricaulis, Thalassospira) in the order Rhodobacterales and 3 species of a single genus (Brevundimonas) in the order Caulobacterales. Gram-staining, cell morphology, basic biochemical characteristics, isolation sources, optimum temperature, growth media, and strain IDs are detailed in the species description as well as Table 1.

• Journal of Species Research
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• v.12 no.spc2
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• pp.15-22
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• 2023

During a comprehensive investigation of indigenous prokaryotic species in Korea, 20 and one bacterial strains assigned to the phyla Bacillota and Verrucomicrobiota, respectively, were isolated from diverse environmental habitats, including soil, mud, tidal flat, seawater, sand, sediment, brackish water, and healthy human urine. Based on their high 16S rRNA gene sequence similarities (>98.7%) and the formation of robust phylogenetic clades with their closest related reported species, each strain was assigned to an independent and predefined bacterial species. Since there were no published or official reports regarding these 21 isolates in Korea, they - 20 species of four families in two orders of the phylum Bacillota and one species of the phylum Verrucomicrobiota - have been reported as unrecorded species in Korea. In addition, Gram staining, colony and cell morphology, basic biochemical characteristic, isolation source, and strain ID of each species are also described in the species description sections.

• Journal of Species Research
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• v.6 no.spc
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• pp.172-176
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• 2017

In this list-format paper, we present unrecorded species of Korean ciliates (phylum Ciliophora). All species were selected from the final reports of the project: "Discovery of Korean Indigenous Species". This project has been carried out to discover and record various Korean indigenous species since 2006 and is funded by the National Institute of Biological Resources (NIBR). Among the various species, ciliates were a major taxon that was highlighted in this project as a speciose group categorized under Protozoa. This paper contains reports of 38 ciliates (8 classes, 16 orders, 23 families, and 34 genera) observed in Korea during the initial five years of the project (2006-2010).

• Journal of agriculture & life science
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• v.45 no.4
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• pp.47-58
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• 2011

The forest of Korea had been severely degraded since early 1900s until 1950s. Korean Government has successfully accomplished the reforestation works since 1960s. However, some plantations showed poor survival and growth caused by ignoring site characteristics in selecting plantation species and lack of tending works such as thinning. The natural regeneration of indigenous species, such as Quercus species and Pinus densiflora Siebold & Zucc., were examined in the plantations of Pinus koraiensis Siebold & Zucc. and Larix kaempferi Fortune ex Gordon. Quercus species regenerated mainly by sprouting while P. densiflora regenerated naturally from a few mother trees that remained in the plantations. P. koraiensis showed poor survival ($IVI{\leq}25%$) and suppressed growth (height ${\leq}3m$ and $DBH{\leq}3cm$ at 20 year-old) by Quercus species or P. densiflora in the plantation areas, however had high survival ($IVI{\geq}70%$) and growth (8 m height and 14.1 cm DBH at 20 year-old) in areas where silvicultural practices were conducted. L. kaempferi showed good survival ($IVI{\geq}40%$) and growth (17.2 m height and 16.3 cm DBH at 30 year-old) mostly in valley areas, while it was nearly dead ($IVI{\leq}10%$) in ridge or ridge-slope areas and was replaced by indigenous species such as Quercus species ($IVI{\geq}25{\sim}55%$) or P. densiflora ($IVI{\geq}18{\sim}50%$).

• Journal of Species Research
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• v.11 no.4
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• pp.335-342
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• 2022

Through the 'Discovery of Korean Indigenous Species' project hosted by the National Institute of Biological Resources (NIBR), new or unrecorded species of various protozoans inhabiting the Korean Peninsula have been discovered. Samples were collected from marine, freshwater, and soil habitats in South Korea and all species were identified and reviewed by experts working on the respective taxonomic group. This study includes 17 unrecorded Korean protozoan species discovered through this project, which belong to four phyla: Amoebozoa Lühe, 1913, Cercozoa Cavalier-Smith, 1998, Euglenozoa Cavalier-Smith, 1981, and Ciliophora Doflein, 1901. Among them, three families (Rhogostomidae Dumack et al., 2017, Parauronematidae Small and Lynn, 1985, and Cyclidiidae Ehrenberg, 1838) and three genera (Rhogostoma Belar, 1921, Parauronema Thompson, 1967, and Cyclidium Müller, 1773) were reported for the first time in Korea. Unlike the previous paper of 2017, this study provides a comprehensive taxonomic account of each species (e.g., species name, collection site, synonyms, specimen vouchers, diagnoses, and figures). Additionally, all the species were assigned Korean names.

• Korean Journal of Veterinary Service
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• v.20 no.4
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• pp.349-358
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• 1997

From December 1995 to July 1997, a total of 546 Korean indigenous goats were examined for the presence of internal parasites by parenchymal organs and fecal examinations. Four hundreds seventy eight(87.5%) of the goats were infected with 4 classes and 12 parasitic species. The nematodes were Haemonchus contortus(57.5%), Oesophagostomun venulosum (52.6%), Strongyloides papillosus(48.4%), Ostertagia sp(28.4%), Trichostrongylus colubriformis(17.0%), and Trichuris ovis(13.2%). The trematodes were Paramphistomum sp(17.6%), Fasciola hepatica(15.4%), and Eurytrema Pancreaticum (8.8%). The cestode was Moniezia expansa(16.7%), and the protozoa were Eimeria sp(74.9%) and Toxoplasma gondii(8.6%). The incidence of single or mixed infections among 12 parasitic species were one species infection (6.2%), 2 species(11.5%), 3 species(19.6%), 4 species(24.9%), 5 species(17.8%), 6 species(5.9 %), and 7 species(1.6), respectively. The level of infection according to the age was considerably higher under one year(97.2%) than between one and two years(89.7%), and over two years(69.3%) Among 12 parasites, seasonal pattern was remarkably observed. Most paracites were detected at the highest level in the Winter, whereas Strongyloides papillosus and Paramphistomum sp were in the Spring, and Ostertagia sp and Fasciola hepatica were in the Autumn. Infection rates of Anaplasma sp were 8.6% of 210 goats by blood smear method, and 51.0% by complement fixation test.

• Journal of Forest and Environmental Science
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• v.29 no.2
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• pp.157-164
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• 2013

The campus of Chittagong University in Bangladesh is rich in forest ecosystem. The campus has large area with vast tract of land planted with valuable timber tree species. The present study identifies and discovers the potential growing stock of the plantations in the campus area. This Growing stock was measured in three parameters viz. volume, biomass and organic carbon stock. Study identified thirty three economically valuable forest tree species in the plantations of Chittagong University. Out of three growing stock parameters, volume of timber was found to be low in indigenous tree species in the plantation sites other than exotic species. This might be due to their slow growth rate and low density in the plantation sites. However, biomass and organic carbon stock of trees per hactre area showed that indigenous species gather and sequester more timber and carbon respectively than introduced species. Plantations of Chittagong University campus can acquire $25.51m^3/ha$ volume of economically important tree species, where biomass and organic carbon stock is 222.33 tonne/ha and 107.48 tonne/ha respectively. This result shows a positive impression on the plantation site to be considered as good forest reserve.

• Journal of Species Research
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• v.10 no.3
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• pp.217-226
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• 2021

During a project aiming to comprehensively investigate indigenous prokaryotic species in Korea, a total of 20 bacterial strains phylogenetically belonging to the the class Bacilli of the phylum Firmicutes were isolated from various environmental sources such as soil, air, tidal flat, sea water, grain, wetland, breast milk and healthy human urine. Phylogenetic analysis based on 16S rRNA gene sequences revealed that 20 bacterial strains showed the high sequence similarities (≥98.7%) to the closest type strains and formed robust phylogenetic clades with closely related species of validly published names in the class Bacilli of the phylum Firmicutes. In the present study, we report 20 species of 13 genera of seven families of two orders of one class in the phylum Firmicutes, which have not been previously reported in Korea. Morphological, biochemical, and physiological characteristics, isolation sources, and NIBR deposit numbers of these unrecorded bacterial species are described in the species descriptions.