• 한국미생물·생명공학회지
• /
• 제49권1호
• /
• pp.57-64
• /
• 2021

Lactic acid bacteria (LAB), belonging to the Firmicutes phylum, lack heme biosynthesis and, thus, are characterized as fermentative and catalase-negative organisms. To verify the hypothesis that heme-rich-nutrients might compensate the heme-biosynthesis incapability of non-respiratory LAB in animal gut, a heme-rich-nutrient was fed to a dog and its fecal microbiome was analyzed. Firmicutes abundance in the feces from the heme-rich-nutrient-fed dog was 99%, compared to 92% in the control dog. To clarify the reason of increased Firmicutes abundance in the feces from the heme-rich-nutrient-fed dog, Lacobacillus gasseri were used as model anerobic LAB to study a purified heme (hemin). The anaerobic growth of L. gasseri in the medium with 25 µM hemin supplementation was faster than that in the medium without hemin, while the growth in the 50 µM hemin-supplemented medium did not vary. Cellular activities of the cytochrome bd complex were 1.55 ± 0.19, 2.11 ± 0.14, and 2.20 ± 0.08 U/gcell in the cells from 0, 25, and 50 µM hemin-supplemented medium, while intracellular ATP concentrations were 7.90 ± 1.12, 11.95 ± 0.68, and 12.56 ± 0.58 µmol_ATP/g_cell, respectively. The ROS-scavenging activities of the L. gasseri cytosol from 25 µM and 50 µM hemin-supplemented medium were 68% and 82% greater than those of the cytosol from no hemin supplemented-medium, respectively. These findings indicate that external hemin could compensate the heme-biosynthesis incapability of L. gasseri by increasing the cytosolic ROS-scavenging and extra ATP generation, possibly through increasing the electron transfer. Increase in the number of anaerobic bacteria in heme-rich-nutrient-fed animal gut is discussed based on the results.

• BMB Reports
• /
• 제45권4호
• /
• pp.239-241
• /
• 2012

Iron availability is limited in the environment and most bacteria have developed a system to acquire iron from host hemoproteins. Heme oxygenase plays an important role by degrading heme group and releasing the essential nutrient iron. The structure of Bacillus subtilis HmoB was determined to 2.0 ${\AA}$ resolution. B. subtilis HmoB contains a typical antibiotic biosynthesis monooxygenase (ABM) domain that spans from 71 to 146 residues and belongs to the IsdG family heme oxygenases. Comparison of HmoB and IsdG family proteins showed that the C-terminal region of HmoB has similar sequence and structure to IsdG family proteins and contains conserved critical residues for heme degradation. However, HmoB is distinct from other IsdG family proteins in that HmoB is about 60 amino acids longer in the N-terminus and does not form a dimer whereas previously studied IsdG family heme oxygenases form functional homodimers. Interestingly, the structure of monomeric HmoB resembles the dimeric structure of IsdG family proteins. Hence, B. subtilis HmoB is a heme oxygenase with a novel structural feature.

• 한국식품영양과학회지
• /
• 제34권5호
• /
• pp.638-643
• /
• 2005

본 연구는 식이 철과 운동이 흰쥐의 헴 생합성과 지질대사에 미치는 영향을 살펴보고자 수행되었다. 쥐는 식이 철의 수준에 따라 철결필군(Fe-, 5 ppm)과 철 충분군(Fe+, 50 ppm)으로 나누고 규칙적인 운동 여부에 따라 운동군과 대조군으로 나누었다. 실험 식이의 공급과 운동을 시킨 기간은 8주였으며, 운동군은 경사 6도에서 28 m/min의 속도로 1회 30분씩 일주일에 5회씩 트레이드밀 운동을 시켰다. 그 결과 횐쥐의 헴 생합성 정도는 운동을 한 군에서 유의적으로 증가하는 것으로 나타났다. 운동은 또한 체중 증가량을 낮추고, 부고환지방량을 감소시켰으며, 혈중 중성지방과 콜레스테롤 수치를 낮추고 HDL-콜레스테롤의 수치를 증가시켰다. 한편, 식이 철의 부족은 헤마토크리트와 헤모글로빈 농도를 감소시켰으며, 간 콜레스테롤의 축적을 증가시켰다. 앞으로 인체를 대상으로 철분 수준이 다른 상태에서의 운동이 헴의 생합성, 지질대사 및 젖산 농도 등에 어떠한 영향을 미치는지에 대한 연구가 더 많이 이루어져야 할 것으로 사료된다.

• BMB Reports
• /
• 제34권4호
• /
• pp.385-389
• /
• 2001

Insulin-like growth factor binding protein-1 (IGFBP-1) appears to be an important modular of the insulin growth factor (IGF) bioactivity in metabolic disease and chronic hypoxia. Treatment of desferrioxamine (Dfo), cobalt, or nickel in HepG2 cells stimulated the expression of IGFBP1 mRNA as hypoxia. However, the presence of ferric ammonium citrate (FAC) in the 1% $O_2$ decreased the upregulation of the IGFBP-1 mRNA expression. In addition, actinomycin D and cycloheximide abolished the increase in the expression of IGFBP-1 mRNA that was induced by Dfo and transition metals (cobalt and nickel). To obtain further information about the putative oxygen sensor, we postulate that putative heme proteins, responsible for the oxygen-sensing process in HepG2 cells, should be sensitive to hypoada. The mechanism of these upregulations of the IGFBP-1 mRNA expression by Dfo and transition metals was investigated by treatment with 2 mM of 4,6-dioxoheptanoic acid (DHA), an inhibitor of heme biosynthesis. The results showed that 1% $O_2$-, Dfo-, cobalt-, or nickel induced IGFBP-1 mRNA expressions in HepG2 cells were all markedly inhibited when the heme synthesis was blocked by DHA. We suggest that the IGFBP-1 mRNA expression in the HepG2 cell is regulated by 1% $O_2$, Dfo, cobalt, or nickel, implicating the involvement of the putative heme-containing oxygensensing molecule.

• 한국미생물학회:학술대회논문집
• /
• 한국미생물학회 1997년도 제37회 춘계학술발표대회
• /
• pp.64.2-64.2
• /
• 1997

• 한국미생물학회:학술대회논문집
• /
• 한국미생물학회 2008년도 International Meeting of the Microbiological Society of Korea
• /
• pp.128-130
• /
• 2008

• Journal of Microbiology and Biotechnology
• /
• 제23권5호
• /
• pp.668-673
• /
• 2013

A recombinant E. coli co-expressing ALA synthase (hemA), NADP-dependent malic enzyme (maeB), and dicarboxylic acid transporter (dctA) was reported to synthesize porphyrin derivatives including iron-containing heme. To enhance the synthesis of bacterial heme, five genes of the porphyrin biosynthetic pathway [pantothenate kinase (coaA), ALA dehydratase (hemB), 1-hydroxymethylbilane synthase (hemC), uroporphyrinogen III synthase (hemD), and uroporphyrinogen III decarboxylase (hemE)] were amplified in the recombinant E. coli co-expressing hemA-maeB-dctA. Pantothenate kinase expression enabled the recombinant E. coli to accumulate intracellular CoA. Intracellular ALA was the most enhanced by uroporphyrinogen III synthase expression, porphobilinogen was the most enhanced by ALA dehydratase expression, uroporphyrin and coproporphyrin were the most enhanced by 1-hydroxymethylbilane synthase expression. The strain co-expressing coaA, hemA, maeB, and dctA produced heme of $0.49{\mu}mol/g$-DCW, which was twice as much from the strain without coaA expression. Further pathway gene amplifications for the porphyrin derivatives are discussed based on the results.

• Mycobiology
• /
• 제50권2호
• /
• pp.121-131
• /
• 2022

The rare edible and medicinal fungus Antrodia cinnamomea has a substantial potential for development. In this study, Illumina HiSeq 2000 was used to sequence its transcriptome. The results were assembled de novo, and 66,589 unigenes with an N50 of 4413 bp were obtained. Compared with public databases, 6,061, 3,257, and 2,807 unigenes were annotated to the Non-Redundant, Gene Ontology, and Kyoto Encyclopedia of Genes and Genomes databases, respectively. The genes related to terpene biosynthesis in the mycelia of A. cinnamomea were analyzed, and acetyl CoA synthase (ACS2 and ACS4), hydroxymethylglutaryl CoA reductase (HMGR), farnesyl transferase (FTase), and squalene synthase (SQS) were found to be upregulated in XZJ (twig of C. camphora) and NZJ (twig of C. kanehirae). Moreover, ACS5 and 2,3-oxidized squalene cyclase (OCS) were highly expressed in NZJ, while heme IX farnesyl transferase (IX-FIT) and ACS3 were significantly expressed in XZJ. The differential expression of ACS1, ACS2, HMGR, IX-FIT, SQS, and OCS was confirmed by real-time quantitative reverse transcription PCR. This study provides a new concept for the additional exploration of the molecular regulatory mechanism of terpenoid biosynthesis and data for the biotechnology of terpenoid production.

• International Journal of Oral Biology
• /
• 제43권4호
• /
• pp.201-207
• /
• 2018

Porphyromonas gingivalis is among the major etiological pathogens of chronic periodontitis. The virulence mechanisms of P. gingivalis is yet to be identified as its activity is largely unknown in actual disease process. The purpose of this study is to identify antigens of P. gingivalis expressed only in patients with chronic periodontitis using a unique immunoscreening technique. Change Mediated Antigen Technology (CMAT), an antibody-based screening technique, was used to identify virulence-associated proteins of P. gingivalis that are expressed only during infection stage in patients having chronic periodontitis. Out of 13,000 recombinant clones screened, 22 tested positive for reproducible reactivity with rabbit hyperimmune anti-sera prepared against dental plaque samples acquired from periodontitis patients. The DNA sequences of these 18 genes were determined. CMAT-identified protein antigens of P. gingivalis included proteins involved in energy metabolism and biosynthesis, heme and iron binding, drug resistance, specific enzyme activities, and unknown functions. Further analysis of these genes could result in a novel insight into the virulence mechanisms of P. gingivalis.

• 분석과학
• /
• 제27권5호
• /
• pp.223-227
• /
• 2014

${\delta}$-Aminolevulinic acid (ALA)는 생물권내에 폭넓게 존재하는 화합물이고, 포유류에서 헴(heme)과 식물에서 엽록소 생성을 하게하는 경로에서 만들어진 테트라피롤의 중간물질로써 생체내 중요한 역할을 한다. ALA는 생분해성 매개자, 성장 조절자, 헴단백질의 전구체 그리고 암 치료에서 사용되는 효과적인 물질로써 관심이 있다. 최근에는 ALA가 피부 치료의 좋은 효과를 가지고 있어 피부과학에서 빈번히 사용된다고 보고되어 있는데, 하지만 지난 몇 십 년 동안, 많은 연구가 ALA 메커니즘의 설명과 치료적 활성 개선에 초점을 맞춰왔지만, 세포 기능과 세포생장에 대한 ALA의 효과는 아직 불분명하다. 본 연구에서는 ALA의 약물학적 효과가 HEK293T 뿐만 아니라, HaCaT와 HeLa 세포에서 세포분열을 억제하는 것으로 확인을 하였다. 또한, ALA가 처리된 세포에서는 세포예정사가 유도되는 것을 확인하였다. 이러한 결과들은 특정 세포에 ALA가 처리되면 세포증식을 억제하며, 특히 인간의 암세포의 죽임을 유발하는 효과적인 약물 중 하나로써 ALA를 개선된 치료 전략으로 가능성을 제시한다.