• Title/Summary/Keyword: genetic environment

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한우의 이유전 성장형질에 관한 유전모수 추정 (Estimation of Genetic Parameters on Pre-weaning Growth Traits in Hanwoo)

  • 황정미;최재관;김형철;최연호;이채영;양부근;신종서;김종복
    • Journal of Animal Science and Technology
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    • 제49권2호
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    • pp.171-176
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    • 2007
  • 본 연구에서는 생산성이 인정된 모돈 F1(YL)에 종료웅돈(Terminal Sire)으로 Duroc종 이외에 생산성 저하에 많은 영향을 미치지 않을 것으로 판단되는 최종 종료웅돈(Terminal Sire) Berkshire종과 Berkshire×Duroc(F1)을 YL(♀) 교배시켜 생산된 비육돈(YLD, YLB, YLBD)의 성장과 육질을 비교 분석 하였다. 성장형질에서는 YL(♀)×BD(♂)가 YL(♀)×D(♂)보다 우수하였으며, 조사된 성장형질 전체에서 유의적인 차이(p<0.05)를 보였다. 육질에서도 pH, 보수력, 육색이 다른 비육돈 보다 유의적으로(p<0.05) 우수하였고, 돼지 육질의 표준이 되는 등심조지방 함량에서 YL(♀)×BD(♂)가 유의적으로 우수하였다. 교배조합별 육색에서는 YL(♀)×BD(♂)가 대체로 명도와 적색도가 높았으며, 지방산 조성에 있어서는 불포화 지방산의 비율이 높은 것으로 나타났다. 따라서, 성장형질에서는 YL(♀)×BD(♂)가 비교 대상의 교배조합에 비해 우수하였으며, 육질에서도 YL(♀)×D(♂) 보다 좋거나 같아 비육돈 교배조합(YLBD)으로서의 이용가치가 있을 것으로 사료된다. 하지만 본 연구의 경우 경남 첨단양돈연구소의 계통조성이 완료된 American Berkshire종을 이용하여 경남의 경우 경남 첨단양돈연구소를 활용하여 별도의 비용이 없이 YLBD를 생산이 가능하겠으나, 다른 지역의 경우 Berkshire의 계통 조성하여 활용할 경우 기존의 종료웅돈 Duroc종을 계통 조성하는 비용만큼 더 소요될 것이라 사료된다.

Influence of Inbreeding Depression on Genetic (Co)Variance and Sire-by-Year Interaction Variance Estimates for Weaning Weight Direct-Maternal Genetic Evaluation

  • Lee, C.;Pollak, E.J.
    • Asian-Australasian Journal of Animal Sciences
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    • 제10권5호
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    • pp.510-513
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    • 1997
  • This study examined the effects of ignoring inbreeding depression on (co)variance components for weaning weight through the use of Monte Carlo simulation. Weaning weight is of particular interest as a trait for which additive direct and maternal genetic components exist and there then is the potential for a direct-maternal genetic covariance. Ignoring inbreeding depression in the analytical model (.8 kg reduction of phenotypic value per 1% inbreeding) led to biased estimates of all genetic (co) variance components, all estimates being larger than the true values of the parameters. In particular, a negative bias in the direct-maternal genetic covariance was observed in analyses that ignored inbreeding depression. A small spurious sire-by-year interaction variance was also observed.

Estimation of Genetic Parameters and Trends for Weaning-to-first Service Interval and Litter Traits in a Commercial Landrace-Large White Swine Population in Northern Thailand

  • Chansomboon, C.;Elzo, M.A.;Suwanasopee, T.;Koonawootrittriron, S.
    • Asian-Australasian Journal of Animal Sciences
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    • 제23권5호
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    • pp.543-555
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    • 2010
  • The objectives of this research were the estimation of genetic parameters and trends for weaning-to-first service interval (WSI), and litter traits in a commercial swine population composed of Landrace (L), Large White (T), LT, and TL animals in Chiang Mai, Northern Thailand. The dataset contained 4,399 records of WSI, number of piglets born alive (NBA), litter weight of live piglets at birth (LBW), number of piglets at weaning (NPW), and litter weight at weaning (LWW). Variance and covariance components were estimated with REML using 2-trait analyses. An animal model was used for WSI and a sire-dam model for litter traits. Fixed effects were farrowing year-season, breed group of sow, breed group of boar (litter traits), parity, heterosis (litter traits), sow age, and lactation length (NPW and LWW). Random effects were boar (litter traits), sow, permanent environment, and residual. Heritabilities for direct genetic effects were low for WSI (0.04${\pm}$0.02) and litter traits (0.05${\pm}$0.02 to 0.06${\pm}$0.02). Most heritabilities for maternal litter trait effects were 20% to 50% lower than their direct counterparts. Repeatability for WSI was similar to its heritability. Repeatabilities for litter traits ranged from 0.15${\pm}$0.02 to 0.18${\pm}$F0.02. Direct genetic, permanent environment, and phenotypic correlations between WSI and litter traits were near zero. Direct genetic correlations among litter traits ranged from 0.56${\pm}$0.20 to 0.95${\pm}$0.05, except for near zero estimates between NBA and LWW, and LBW and LWW. Maternal, permanent environment, and phenotypic correlations among litter traits had similar patterns of values to direct genetic correlations. Boar genetic trends were small and significant only for NBA (-0.015${\pm}$0.005 piglets/yr, p<0.004). Sow genetic trends were small, negative, and significant (-0.036${\pm}$0.013 d/yr, p<0.01 for WSI; -0.017${\pm}$0.005 piglets/yr, p<0.007, for NBA; -0.015${\pm}$0.005 kg/yr, p<0.01, for LBW; -0.019${\pm}$0.008 piglets/yr, p<0.02, for NPW; and -0.022${\pm}$0.006 kg/yr, p<0.003, for LWW). Permanent environmental correlations were small, negative, and significant only for WSI (-0.028${\pm}$0.011 d/yr, p<0.02). Environmental trends were positive and significant only for litter traits (p<0.01 to p<0.0003). Selection based on predicted genetic values rather than phenotypes could be advantageous in this population. A single trait analysis could be used for WSI and a multiple trait analysis could be implemented for litter traits.

Evaluation of Genetic Parameters of Growth Characteristics and Basic Density of Eucalyptus pellita Clones Planted at Two Different Sites in East Kalimantan, Indonesia

  • Alfia Dewi FADWATI;Fanny HIDAYATI;Mohammad NA'IEM
    • Journal of the Korean Wood Science and Technology
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    • 제51권3호
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    • pp.222-237
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    • 2023
  • Eucalyptus pellita is one of the fast-growing tree species and has become predominant in Indonesian forest plantations. Meanwhile, tree breeding programs with clone development are the best way to provide greater genetic advantages. A better understanding of genetic control on growth and basic density in E. pellita is important for increasing wood productivity and quality. In this study, growth characteristics (tree height, diameter, and volume), basic density and its genetic parameters (heritability, genetic gain and genetic correlation) were determined. The number of clones tested in both trials was 50, divided into 5 blocks, and 5 trees/plot. The results showed that there were significant differences in growth and basic density among clones. There was an interaction between genetics and the environment further indicating the existence of unstable clones. The high heritability was found in tree height (0.82-0.86), diameter (0.82-0.90), and basic density (0.91-0.93). This implies that E. pellita has good opportunities for genetic improvement to increase wood productivity and quality. In addition, the results of genetic correlations among growth characteristics (height, diameter, and volume) and basic density showed positive moderate to highly significant value. It is suggested that these characters may be used to the advantage of the breeder for bringing improvement in these traits simultaneously. Therefore, this study provides important information of the genetic improvement of wood quality in E. pellita in Indonesia.

한국 콩 보급품종을 포함한 엘리트품종의 SSR마커에 의한 유전적 다양성과 품종판별 (Genetic Diversity and Identification of Korean Elite Soybean Cultivars including Certified Cultivars Based on SSR Markers)

  • 장성진;박수정;박경호;송항림;조용구;정승근;강정훈;김홍식
    • 한국작물학회지
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    • 제54권2호
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    • pp.231-240
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    • 2009
  • 우리나라에서 1994년부터 2007년까지 보급된 콩 20개 보급품종과 6개의 유망품종을 포함한 26개의 엘리트품종들을 SSR마커를 이용하여 유전적 다양성과 유연관계를 분석하고, 품종을 판별한 결과를 요약하면 다음과 같다. 1. SSR마커 15개를 이용하여 분석한 결과 총 201개의 대립인자가 확인되었고, 각 유전좌별로 최소 8개(Satt141)에서 최대 19개(Satt197)의 대립인자가 확인되었으며, 마커당 대립인자수는 평균 13.4개이었다. 2. 15개 SSR마커에 의한 국내 콩 엘리트품종들의 유전적다양성 (PIC값)은 평균 0.874이었고 그 범위는 0.931-0.782이었으며, 마커별로는 Satt197이 0.931로 가장 높았고 Satt141이 0.782로 가장 낮았다. 3. SSR마커를 이용한 유전적거리에 의한 군집분석한 결과, 26개 품종이 3개 그룹으로 분류되었으며, I그룹에 2품종(7.7%), II그룹에 7품종(26.9%), 그리고 III그룹에 17품종(65.4%)이 속하였다. 4. SSR마커에 의하여 분류된 3그룹내의 유전적 다양성은 0.720-0.799으로 평균 0.769이었고, 그룹간의 유전적 다양성은 0.725-0.857으로 평균 0.813이었다. 그룹간이 그룹내보다 유전적 다양성이 더 높았으며, 유연관계는 I그룹은 II그룹 및 III그룹과 유전적거리가 가까웠으며, II그룹과 III그룹간은 서로 유전적거리가 다소 멀었다. 5. 다형성이 높은 5개의 SSR마커 중에서 2개 마커를 이용한 5개조합($Satt197+Sat_088$, Satt197+Satt245, $Sat_088+Sat_036$, $Sat_088+Satt245$, Satt185+Satt245)이 선정되었으며, 이중 어느 조합을 사용하여도 26개 엘리트품종 모두의 판별이 가능하였다.

경기도에서 분리된 Campylobacter jejuni의 유전자 패턴 분석 연구 (Genetic analysis of Campylobacter jejuni isolates from diarrhea patients in Gyeonggi-do)

  • 김운호;최옥경;정진아;박성희;이예은;박광희;윤미혜
    • 미생물학회지
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    • 제54권1호
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    • pp.31-37
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    • 2018
  • 캄필로박터 제주니 균(Campylobacter jejuni)은 세균성위장관감염증을 일으키는 수인성식품매개질환의 중요한 원인 균으로 알려져 있다. 2014년부터 2016년까지 경기지역에서 발생된 17번의 식중독에서 캄필로박터 제주니 균에 감염된 430명의 환자와 조리종사자에게서 208건의 균주를 선별하였다. 선별된 균주의 유전적 상관관계와 유전형분포를 확인하기 위하여 PFGE와 multiplex-PCR typing 방법을 사용하여 비교분석 하였다. 47개의 Penner-type으로 구분되는 캄필로박터 제주니 균의 혈청형을 multiplex-PCR typing을 이용하여 35개의 유전형으로 구분할 수 있는 것을 확인하였고 선별된 균주에서 7개의 유전형(HS2, HS4A, HS8, HS15, HS29, HS41, HS53)으로 구분되는 것을 확인하였다. 가장 많은 케이스에서 분리된 유전형은 HS2였고 7건의 식중독케이스에서 확인되었다. PFGE를 통하여 11건의 식중독에서 모두 5개의 그룹으로 분류되었고 그룹간의 유사성은 61.8에서 66.6%였다. 본 연구는 다양한 유전자 분석방법을 통하여 경기도내에서 분리된 캄필로박터 제주니 균의 유전적 다양성을 파악하고 향후 집단발생시 환자의 분리 균주 간의 상관관계 규명하며 캄필로박터 감염증의 발생 및 확산 방지에 필요한 기초자료를 마련하고자 한다.

Handling a Multi-Tasking Environment via the Dynamic Search Genetic Algorithm

  • Koh, S.P.;Aris, I.B.;Bashi, S.M.;Chong, K.H.
    • Journal of Electrical Engineering and Technology
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    • 제3권1호
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    • pp.125-129
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    • 2008
  • A new genetic algorithm for the solution of a multi-tasking problem is presented in this paper. The approach introduces innovative genetic operation that guides the genetic algorithm more directly towards better quality of the population. A wide variety of standard genetic parameters are explored, and results allow the comparison of performance for cases both with and without the new operator. The proposed algorithm improves the convergence speed by reducing the number of generations required to identify a near-optimal solution, significantly reducing the convergence time in each instance.

Genetic Algorithm for Identification of Time Delay Systems from Step Responses

  • Shin, Gang-Wook;Song, Young-Joo;Lee, Tae-Bong;Choi, Hong-Kyoo
    • International Journal of Control, Automation, and Systems
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    • 제5권1호
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    • pp.79-85
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    • 2007
  • In this paper, a real-coded genetic algorithm is proposed for identification of time delay systems from step responses. FOPDT(First-Order Plus Dead-Time) and SOPDT(Second-Order Plus Dead-Time) systems, which are the most useful processes in this field, but are difficult for system identification because of a long dead-time problem and a model mismatch problem. Genetic algorithms have been successfully applied to a variety of complex optimization problems where other techniques have often failed. Thus, the modified crossover operator of a real-code genetic algorithm is proposed to effectively search the system parameters. The proposed method, using a real-coding genetic algorithm, shows better performance characteristics when compared to the usual area-based identification method and the directed identification method that uses step responses.

On the Negative Estimates of Direct and Maternal Genetic Correlation - A Review

  • Lee, C.
    • Asian-Australasian Journal of Animal Sciences
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    • 제15권8호
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    • pp.1222-1226
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    • 2002
  • Estimates of genetic correlation between direct and maternal effects for weaning weight of beef cattle are often negative in field data. The biological existence of this genetic antagonism has been the point at issue. Some researchers perceived such negative estimate to be an artifact from poor modeling. Recent studies on sources affecting the genetic correlation estimates are reviewed in this article. They focus on heterogeneity of the correlation by sex, selection bias caused from selective reporting, selection bias caused from splitting data by sex, sire by year interaction variance, and sire misidentification and inbreeding depression as factors contributing sire by year interaction variance. A biological justification of the genetic antagonism is also discussed. It is proposed to include the direct-maternal genetic covariance in the analytical models.