• Korean Journal of Environment and Ecology
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• v.21 no.5
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• pp.415-431
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• 2007

The native vascular plants, growing at the nature sabbatical application area, were classified & recorded as a total of 407 taxa, 83 families, 235 genera, 338 species, 3 subspecies, 54 varieties and 12 forms. The endangered wild plants were recorded as 2 taxa (Paeonia obovata and Lilium cernuum) and the Korean endemic plants were observed to exist in the formation of 21 taxa, 13 families, 19 genera, 15 species, 4 varieties and 2 forms including Cephalotaxus koreana, Pseudostellaria coreana, Aconitum pseudo-laeve, Clematis trichotoma, Geranium koreanum for. hirsutum, Thalictrum uchiyamai. The floristic special plants consist of 55 taxa, 35 families, 50 genera, 51 species, 4 varieties(Crypsinus hastatus, Cimicifuga heracleifolia, Paeonia obovata, Lilium cernuum and Gastrodia elata etc.). The naturalized plants comprise 10 taxa, 4 families, 10 genera, 9 species and 1 variety. The ratio of Urbanization and Naturalized Index was 3.51% and 2.46%, respectively. Life form spectra were displayed as H-R5-D4-e type.

• Korean journal of applied entomology
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• v.54 no.3
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• pp.169-177
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• 2015

The Korean species of the genera Cremastus Gravenhorst, 1829 and Pristomerus Curtis, 1836 (Hymenoptera: Ichneumonidae) are studied. Here we report three species, Cremastus crassitibialis Uchida, 1940, Pristomerus rufiabdominalis Uchida, 1928 and P. scutellaris Uchida, 1932, new to South Korea. Among them genus Cremastus is recorded for the first time from South Korea. The number of Korean Cremastinae is now 11 species in four genera including the three newly recorded species. A key to the genera of Korean Cremastinae, diagnosis of newly recorded species and photographs of redescriptions characters are provided.

• Korean Journal of Plant Taxonomy
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• v.45 no.2
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• pp.183-191
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• 2015

The palynological characters of 14 taxa of 4 genera (Cynanchum, Metaplexis, Tylophora, Marsdenia) in Asclepiadoideae were observed and measured using SM and SEM. The orientation and granulate surface patterns of the pollinia were important characters for delimitating the genera. The position of the attachment of the translator arms to the pollinia, considered to be an important character for recognizing the above genera, was an overlapping character among the genera and can therefore be utilized only as taxonomy at the species level. Also, we found for the first time that only Tylophora floribunda has an incised margin of the corpusculum. The quantitative characters of the pollinia, arms and corpusculum were useful keys for the delimitation of the species.

• Mycobiology
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• v.41 no.2
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• pp.100-107
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• 2013

Diverse fungi are present in Korean traditional meju and they are known to play an important role in fermented soybean products. To determine the origin of the fungi in meju, we examined the mycoflora of soybeans from 10 traditional meju factories. The samples were untreated or treated with sodium hypochlorite, and placed on malt extract agar (MEA), dichloran 18% glycerol agar (DG18), and dichloran rose bengal chloramphenicol agar (DRBC) medium. A total of 794 fungal strains were isolated and they were identified as 41 genera and 86 species. From sodium hypochlorite untreated soybeans, the genera, Cladosporium (55%), Eurotium (51%), Fusarium (33%), Penicillium (22%), and Aspergillus (exclusion of Eurotium) (20%), were mainly isolated, and Eurotium herbariorum (22%), Eurotium repens (18%), Cladosporium tenuissimum (18%), F. fujikuroi (18%), Aspergillus oryzae/flavus (7%), and Penicillium steckii (6%) were the predominant species. In case of sodium hypochloritetreated soybeans, Eurotium (31%) and Cladosporium (5%) were frequently isolated, but Aspergillus (excluding Eurotium), Penicillium and Fusarium which were frequently isolated from untreated soybeans, were rarely isolated. Eurotium herbariorum (21%), Eurotium repens (8%), and Cladosporium tenuissimum (3%) were the predominant species. Of the 41 genera and 86 species isolated from soybeans, 13 genera and 33 species were also found in meju. These results suggest that the fungi on soybeans may influence the mycoflora of meju.

• Journal of Species Research
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• v.9 no.1
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• pp.26-34
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• 2020

The phylum Bacteroidetes covers phenotypically diverse groups of Gram negative rods that do not form endospores, and currently includes 6 classes, 6 orders, 33 families and 380 genera. Members of Bacteroidetes can be aerobic and anaerobic heterotrophs, hydrogen utilizing chemolithotrophs, or methylotrophs. They can be isolated from diverse habitats including terrestrial and aquatic environments, environments with extreme physicochemical conditions, and animal and plant hosts. During a series of extensive surveys of prokaryotic species diversity in Korea, bacterial strains belonging to Bacteroidetes were isolated from various sources of aquatic and terrestrial environments. A total of 22 isolates were obtained, which represent 22 unrecorded species in Korea belonging to 14 genera of 6 families. Sixteen species among them were assigned to Flavobacteriaceae, two species were to Sphingobacteriaceae, and single species was to each of the families Bacteroidaceae, Balneolaceae, Chitinophagaceae and Cytophagaceae. At genus level, Chryseobacterium (5 species) and Flavobacterium (5 species) were the most abundant genera, and single species were obtained for the genera Bacteroides, Baloneola, Terrimonas, Dyadobacter, Aquimarina, Arenibacter, Gillisia, Gilvibacter, Salinimicrobium, Winogradskyella, Pedobacter and Sphingobacterium. The detailed descriptions of each unrecorded species are provided.

• Journal of Animal Science and Technology
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• v.64 no.6
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• pp.1184-1198
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• 2022

In this study, Rubus coreanus (R. coreanus) byproducts with high polyphenol content were fermented with R. coreanus-derived lactic acid bacteria (Lactobacillus plantarum GBL 16 and 17). Then the effect of R. coreanus-derived lactic acid bacteria fermented feed (RC-LAB fermented feed) with probiotics (Bacillus subtills, Aspergillus oryzae, Yeast) as a feed additive for pigs on the composition of intestinal microbes and the regulation of intestinal immune homeostasis was investigated. Seventy-two finishing Berkshire pigs were randomly allotted to four different treatment groups and 18 replicates. RC-LAB fermented feed with probiotics increased the genera Lactobacillus, Streptococcus, Mitsuokella, Prevotella, Bacteroides spp., Roseburia spp., and Faecalibacterium prausnitzii, which are beneficial bacteria of the digestive tract of pigs. Also, RC-LAB fermented feed with probiotics decreased the genera Clostridium, Terrisporobacter, Romboutsia, Kandleria, Megasphaera and Escherichia, which are harmful bacteria. In particular, the relative abundance of the genera Lactobacillus and Streptococcus increased by an average of 8.51% and 4.68% in the treatment groups and the classes Clostridia and genera Escherichia decreased by an average of 27.05% and 2.85% in the treatment groups. In mesenteric lymph nodes (MLN) and spleens, the mRNA expression of transcription factors and cytokines in Th1 and Treg cells increased and the mRNA expression of Th2 and Th17 transcription factors and cytokines decreased, indicating a regulatory effect on intestinal immune homeostasis. RC-LAB fermented feed regulates gut immune homeostasis by influencing the composition of beneficial and detrimental microorganisms in the gut and regulating the balance of Th1/Th2 and Th17/Treg cells.

• ALGAE
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• v.38 no.4
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• pp.241-252
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• 2023

The genera Carolibrandtia and Chlorella have been described as small green algae with spherical cell shapes that inhabit various environments. Species of these genera are often difficult to identify because of their simple morphology and high phenotypic plasticity. We investigated two small coccoid strains from Antarctica based on morphology, molecular phylogeny by two alignment methods which have been applied to previous phylogenetic studies of the genus Chlorella, and comparison of the secondary structures of nuclear small subunit (SSU) and internal transcribed spacer (ITS) rDNA sequences. Light microscopy of two strains revealed spherical cells containing chloroplasts with pyrenoids, and the morphological characteristics of the strains were nearly identical to those of other Chlorella species. However, based on the phylogenetic analyses of nuclear SSU and ITS rDNA sequences, it was determined that the Antarctic microalgal strains belonged to two genera, as the Chlorella and Carolibrandtia. In addition, the secondary structures of the SSU and ITS2 sequences were analyzed to detect compensatory base changes (CBCs) that were used to identify and describe the two strains. A unique CBC in the SSU rDNA gene was decisive for distinguishing strain CCAP 211/45. The ITS2 rDNA sequences for each strain were compared to those obtained previously from other closely related species. Following the comparison of morphological and molecular characteristics, we propose KSF0092 as a new species, Chlorella terrestris sp. nov., and the reassignment of the strain Chlorella antarctica CCAP 211/45 into Carolibrandtia antarctica comb. nov.

• Journal of Genetic Medicine
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• v.20 no.2
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• pp.52-59
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• 2023

Purpose: Colorectal cancer (CRC) is a common malignancy worldwide and the second leading cause of cancer-related deaths. In addition, lymph node metastasis in CRC is considered an important prognostic factor for predicting disease recurrence and patient survival. Recent studies demonstrated that the microbiome makes substantial contributions to tumor progression, however, there is still unknown about the microbiome associated with lymph node metastasis of CRC. Here, we first reported the microbial and tumor-infiltrating immune cell differences in CRC according to the lymph node metastasis status. Materials and Methods: Using Next Generation Sequencing data acquired from 368 individuals diagnosed with CRC (N0, 266; N1, 102), we applied the LEfSe to elucidate microbial differences. Subsequent utilization of the Kaplan-Meier survival analysis enabled the identification of particular genera exerting significant influence on patient survival outcomes. Results: We found 18 genera in the N1 group and 3 genera in the N0 group according to CRC lymph node metastasis stages. In addition, we found that the genera Crenobacter (P=0.046), Maricaulis (P=0.093), and Arsenicicoccus (P=0.035) in the N0 group and Cecembia (P=0.08) and Asanoa (P=0.088) in the N1 group were significantly associated with patient survival according to CRC lymph node metastasis stages. Further, Cecembia is highly correlated to tumor-infiltrating immune cells in lymph node metastasized CRC. Concolusion: Our study highlights that tumor-infiltrating immune cells and intratumoral microbe diversity are associated with CRC. Also, this potential microbiome-based oncology diagnostic tool warrants further exploration.

• Korean journal of applied entomology
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• v.42 no.3
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• pp.173-184
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• 2003

Beetles belonging to the families Scolytidae, Platypodidae, Bostrichidae, and Lyctidae intercepted from imported timbers at Busan port were investigated from March 1 to November 30 in 2000. In addition, hosts imported country were examined. A total of 52 species of within 23 genera was intercepted from nineteen species of timbers or logs from fifteen countries. In Scolytidae, 35 species of 16 genera in three subfamilies were identified 12 species in Xyleborus, 6 species in Ips, 3 species in Trypodendron, 2 species in Arixyleborus, and 12 species of all different genera including Alinphagous. Scolytidae were intercepted from 16 species of timbers in 13 genera imported from 11 countries. The highest beetles were intercepted from Malaysian lauan. In Platypodidae, 9 species of one genus (Platypus) were intercepted from 6 species of timbers in 4 genera imported from 6 countries including Australia. The highest numbers were intercepted from Malysian lauan. In Bostrychidae, 5 species of 4 genera in two subfamilies were intercepted from 6 species of timbers in 4 genera imported from four countries. In Lyctidae, Trogoxylon sp., Minthea sp., and Minthea rugicollis were intercepted from 3 species of timbers in 2 genera imported from 3 countries.

• Korean journal of applied entomology
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• v.52 no.2
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• pp.85-91
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• 2013

A diverse range of taxonomic confusions are brought forth since past taxonomic information including major errors following its initial provision of some uncertain information has repeatedly been applied to Korean Vespidae in its identification. Thus, this study, which made a final summarization of research on Vespidae, provided the list of Korean Vespidae determined except for Eumeninae, with their distributional data. A total of 30 species (including 3 subspecies) belonging to 5 genera of 2 subfamilies are listed: subfamily Vespinae (3 genera/ 18 species) and subfamily Polistinae (2 genera/ 12 species).