• The Plant Pathology Journal
• /
• 제39권4호
• /
• pp.409-416
• /
• 2023

Bacterial leaf blight of carrots caused by Xanthomonas hortorum pv. carotae (Xhc) is an important worldwide seed-borne disease. In 2012 and 2013, symptoms similar to bacterial leaf blight were found in carrot farms in Jeju Island, Korea. The phenotypic characteristics of the Korean isolation strains were similar to the type strain of Xhc. Pathogenicity showed symptoms on the 14th day after inoculation on carrot plants. Identification by genetic method was multi-position sequencing of the isolated strain JJ2001 was performed using four genes (danK, gyrB, fyuA, and rpoD). The isolated strain was confirmed to be most similar to Xhc M081. Furthermore, in order to analyze the genetic characteristics of the isolated strain, whole genome analysis was performed through the next-generation sequencing method. The draft genome size of JJ2001 is 5,443,372 bp, which contains 63.57% of G + C and has 4,547 open reading frames. Specifically, the classification of pathovar can be confirmed to be similar to that of the host lineage. Plant pathogenic factors and determinants of the majority of the secretion system are conserved in strain JJ2001. This genetic information enables detailed comparative analysis in the pathovar stage of pathogenic bacteria. Furthermore, these findings provide basic data for the distribution and diagnosis of Xanthomonas hortorum pv. carotae, a major plant pathogen that infects carrots in Korea.

• 식물병연구
• /
• 제30권2호
• /
• pp.157-164
• /
• 2024

Jack bean (Canavalia ensiformis) is one of healthy products for fermented or functional food in Korea and is widely distributed and cultivated worldwide. During August 2022, Jack bean plants showing symptoms of yellow flecks, chlorosis, necrotic spots and mosaic were observed in Jangheung-gun, South Korea. By transmission electron microscopy, flexuous filamentous virus particles of approximately 750×13 nm in size were observed in the symptomatic leaf samples. The infection of a Korean isolate of clover yellow vein virus (ClYVV-Ce-JH) was confirmed using double antibody sandwich enzyme-linked sorbent assay, reverse transcription polymerase chain reaction and high-throughput sequencing. The complete genome sequence of ClYVV-Ce-JH consists of 9,549 nucleotides (nt) excluding the poly (A) tail and encodes 3,072 amino acids (aa), with an AUG start and UAG stop codon, containing one open reading frame that is typical of a potyvirus polyprotein. The polyprotein of ClYVV-Ce-JH was divided into ten proteins and each protein's cleavage sites were determined. The coat protein (CP) and polyprotein of ClYVV-Ce-JH were compared at the nt and aa levels with those of the previously reported 14 ClYVV isolates. ClYVV-Ce-JH shared 92.62% to 99.63% and 93.39% to 98.05% at the CP and polyprotein homology. To our knowledge, this is the first report of a Korean isolate of ClYVV from Jack bean plants and the complete genome sequence of a ClYVV Jack bean isolate in the world.

• BMB Reports
• /
• 제40권5호
• /
• pp.773-782
• /
• 2007

Different isolates of the soil bacterium Bacillus thuringiensis produce multiple crystal (Cry) proteins toxic to a variety of insects, nematodes and protozoans. These insecticidal Cry toxins are known to be active against specific insect orders, being harmless to mammals, birds, amphibians, and reptiles. Due to these characteristics, genes encoding several Cry toxins have been engineered in order to be expressed by a variety of crop plants to control insectpests. The cotton boll weevil, Anthonomus grandis, and the fall armyworm, Spodoptera frugiperda, are the major economically devastating pests of cotton crop in Brazil, causing severe losses, mainly due to their endophytic habit, which results in damages to the cotton boll and floral bud structures. A cry1Ia-type gene, designated cry1Ia12, was isolated and cloned from the Bt S811 strain. Nucleotide sequencing of the cry1Ia12 gene revealed an open reading frame of 2160 bp, encoding a protein of 719 amino acid residues in length, with a predicted molecular mass of 81 kDa. The amino acid sequence of Cry1Ia12 is 99% identical to the known Cry1Ia proteins and differs from them only in one or two amino acid residues positioned along the three domains involved in the insecticidal activity of the toxin. The recombinant Cry1Ia12 protein, corresponding to the cry1Ia12 gene expressed in Escherichia coli cells, showed moderate toxicity towards first instar larvae of both cotton boll weevil and fall armyworm. The highest concentration of the recombinant Cry1Ia12 tested to achieve the maximum toxicities against cotton boll weevil larvae and fall armyworm larvae were 230 ${\mu}g/mL$ and 5 ${\mu}g/mL$, respectively. The herein demonstrated insecticidal activity of the recombinant Cry1Ia12 toxin against cotton boll weevil and fall armyworm larvae opens promising perspectives for the genetic engineering of cotton crop resistant to both these devastating pests in Brazil.

• 경영정보학연구
• /
• 제12권1호
• /
• pp.145-164
• /
• 2010

현재 이동통신 시장은 과거 음성통화 위주의 서비스 시장과는 달리 다양한 서비스 제공 및 사용을 기반으로 한 통신 산업의 질적 팽창기로 여겨지고 있다. 특히 3세대 서비스가 시작된 2007년 이후, 각 이동통신 사업자들은 영상통화를 시작으로 다양한 이동통신 서비스를 고객에게 제공하기 시작하였고 휴대전화 기술 역시 기술의 발전에 힘입어 디지털 융합(digital convergence) 기기로 변화된 양상이다. 이러한 상황에서, LG 텔레콤이 최초로 서비스를 시작한 풀브라우징(full browsing) 서비스가 3세대 (3G) 핵심 서비스로 주목 받고 있다. 풀브라우징 서비스란, 휴대전화를 통해 컴퓨터와 동일한 형태의 인터넷 환경을 사용 가능하게 하는 서비스로, 기존 월드가든(walled garden) 형태의 데이터 서비스의 개념을 뛰어 넘는 개방형 모바일 인터넷 서비스를 지향한다. 이와 같은 개방형 네트워크 서비스 환경에서의 기업 간의 경쟁 양상과 경쟁에 영향을 줄 수 있는 요인을 분석하는 것은 추후 이동통신 시장의 향방 및 개별 기업의 전략 수립에 매우 중요한 축이 될 수 있다. 따라서 본 연구에서는 첫째, 급변하고 있는 이동통신 서비스 시장에서의 풀브라우징 서비스의 시장 현황 및 걸림돌, 성장 가능성 등을 정성적으로 예측하였다. 둘째, 풀브라우징 서비스 선발자(first mover)로서의 LG 텔레콤과 후발자(follower)로서의 KTF, SK 텔레콤이 갖는 경쟁에 있어서의 장단점이 기존 이동통신 시장에서 나타났던 장단점과 어떻게 다르게 나타나는지 확인한 후, 이를 통해 기업 간 경쟁의 향방을 예상해 보았다.

• 대한수의학회지
• /
• 제51권4호
• /
• pp.253-257
• /
• 2011

Amikacin is a semisynthetic derivative of kanamycin and primarily active against aerobic Gram-negative-pathogens with limited activity against Gram-positive bacteria. Meager study was reported on pharmacokinetic data on multi-days administration of amikacin. Hence, pharmacokinetics study was done in five clinically healthy goats (n = 5), after intravenous bolus injection of amikacin sulfate at the dose rate of 10 mg/kg body weight daily for three consecutive days. The amikacin concentrations in plasma and pharmacokinetics-parameters were analyzed by using microbiological assay technique and noncompartmental open-model, respectively. The mean peak plasma concentrations (Mean ${\pm}$ SD) of amikacin at time zero ($Cp^{0}$) was $114.19{\pm}20.78$ and $128.67{\pm}14.37{\mu}g/mL$, on day 1st and 3rd, respectively. The mean elimination half-life ($t_{1/2}ke$) was $1.00{\pm}0.28h$ on day 1st and $1.22{\pm}0.29h$ on day 3rd. Mean of area under concentration-time curve ($AUC_{0{\rightarrow}{\infty}}$) was $158.26{\pm}60.10$ and $159.70{\pm}22.74{\mu}g.h/mL$, on day 1st and 3rd respectively. The total body clearance ($Cl_{B}$) and volume of distribution at steady state (Vdss) on day 1st and 3rd were $Cl_{B}=0.07{\pm}0.02$ and $0.06{\pm}0.01L/h.kg$ and $Vdss=0.10{\pm}0.03$ and $0.11{\pm}0.05L/kg$, respectively. No-significant difference was noted in both drug-plasma concentration and pharmacokinetics-parameters, respectively. Amikacin concentration in plasma was found higher up-to 4 h and 6 h onward on down-ward trends favour to reduce toxicity. Which also support the pharmacokinetic-pharmacodynamic way of dosing of aminoglycosides and hence, amikacin may be administered 10 mg/kg intravenously daily to treat principally Gram-negative pathogens and limitedly Gram-positive-pathogens.

• 한국환경보건학회지
• /
• 제42권4호
• /
• pp.235-245
• /
• 2016

Objectives: This study estimated the adult Korean daily intake of acrylamide (AA) and investigated its relationship with demographic, lifestyle and dietary habits by using urinary concentrations of N-acetyl-S-(2-carbamoylethyl)-cysteine (AAMA). Methods: Human data (n=1870) was collected in a nationwide cross-sectional biomonitoring program representing the population (18-69 years) residing in South Korea. Urinary AAMA was analyzed with a LC-MS/MS system. Daily intakes of AA were estimated using mass daily AAMA, which was calculated through urinary AAMA concentration and daily creatinine excretion. Statistical analysis was performed with SAS procedures for calculating geometric means, confidence intervals and the exponentiated beta coefficient of multiple linear regressions. Results: Daily intake of AA was estimated at $0.475{\mu}g/kg$ body weight (BW) per day (95% confidence interval (CI): 0.447-0.503). In the case of current smokers, AA intake was $0.957{\mu}g/kg$ BW per day (95% CI: 0.847-1.067), which was significantly higher than that of former smokers and never smoked (p<0.0001). The strong affecting factors were age (95% CI: 0.68-1.14; p=0.0180), education level (95% CI: 1.05-1.42; p=0.0163), body mass index (BMI) (95% CI: 1.00-1.82; p<0.0001), and smoking status (95% CI: 0.97-3.05; p<0.0001). Korean dietary habits increasing AA intake were coffee (p=0.0005), cup noodles (p=0.0010) and canned foods (p=0.0005). Meanwhile, foods decreasing AA intake were fresh fruit (p=0.0076), cooked beef (p=0.0335) and cooked pork (p=0.0147). Conclusion: The Korean daily intake of AA in adults was estimated to be similar with those found in developed countries. The factors increasing daily AA intake were coffee, cup noodles and canned foods, and decreasing factors were fresh fruit, cooked beef and cooked pork.

• Asian-Australasian Journal of Animal Sciences
• /
• 제20권9호
• /
• pp.1319-1326
• /
• 2007

Fructose-1,6-bisphosphatase (FBP1) is a key regulatory enzyme of gluconeogenesis that catalyzes the hydrolysis of fructose-1,6-bisphosphate to generate fructose-6-phosphate and inorganic phosphate. Deficiency of fructose-1, 6-bisphosphatase is associated with fasting hypoglycemia and metabolic acidosis. The enzyme has been shown to occur in bacteria, fungi, plants and animals. The bovine FBP1 gene was cloned and characterized in this study. The full length (1,241 bp) FBP1 mRNA contained an open reading frame (ORF) encoding a protein of 338 amino acids, a 63 bp 5' untranslated region (UTR) and a 131 bp 3' UTR. The bovine FBP1 gene was 89%, 85%, 82%, 82% and 74% identical to the orthologs of pig, human, mouse, rat and zebra fish at mRNA level, and 97%, 96%, 94%, 93% and 91% identical at the protein level, respectively. This gene was broadly expressed in cattle with the highest level in testis, and the lowest level in heart. An intronic single nucleotide polymorphism (SNP) (A/G) was identified in the $5^{th}$ intron of the bovine FBP1 gene. Genotyping of 133 animals from four beef breeds revealed that the average frequency for allele A (A-base) was 0.7897 (0.7069-0.9107), while 0.2103 (0.0893-0.2931) for allele B (G-base). Our preliminary association study indicated that this SNP is significantly associated with traits of Average Daily Feed Intake (ADFI) and Carcass Length (CL) (p<0.01). In addition, the FBP1 gene was assigned on BTA8 by a hybrid radiation (RH) mapping method.

• 생약학회지
• /
• 제16권4호
• /
• pp.233-238
• /
• 1985

A number of sedative alkaloids were isolated from Sanjoin(酸棗仁), the seeds of Zizyphus vulgaris Lamark var. spinosus Bunge (Rhamnaceae) which is an important Chinese medicinal material used to treat insomnia and sometimes to treat sleepiness. Those compounds were designated as Sanjoinine-A, B, C, D, etc. depending on the order of increasing polarity. Sanjoinine-A, $C_{31}H_{42}N_4O_4$, $mp\;249^{\circ}$, $[{\alpha}]^{27}_D-316$, Sanjoinine-B, $C_{30}H_{40}N_4O_4$, $mp\;212{\sim}4^{\circ}$, Sanjoinene, $C_{29}H_{35}N_3O_4$, $mp\;281{\sim}2^{\circ}$, $[{\alpha}]^{22}_D-272$, Sanjoinine-D, $C_{32}H_{46}N_4O_5$, $mp\;256{\sim}8^{\circ}$, $[{\alpha}]^{22}_D-53.6$, Sanjoinine-F, $C_{31}H_{42}N_4O_5$, $mp\;228{\sim}9^{\circ}$, $[{\alpha}]^{22}_D-215$, and $Sanjoinine-G_1,\;C_{31}H_{44}N_4O_5,\;mp\;236{\sim}8^{\circ},\;[{\alpha}]^{22}_D-68.6$, were found as 14-membered cyclic peptide alkaloids, $Sanjoinine-G_2,\;C_{30}H_{42}N_4O_4,\;mp\;182^{\circ},\;[{\alpha}]^{22}_D-79.2$, as being open chain peptide alkaloid, and Sanjoinine-E, $C_{19}H_{21}NO_2$, $mp\;166^{\circ}$, $[{\alpha}]^{20}_D-146.2$, N-Methylasimilobine, $C_{18}H_{19}NO_2$, $mp\;193{\sim}5^{\circ}$, $[{\alpha}]^{20}_D-204$, Sanjoinine-Ia, $C_{18}H_{19}NO_2$, $mp\;155{\sim}7^{\circ}$, $[{\alpha}]^{20}_D-140$, Sanjoinine-Ib, $C_{19}H_{21}NO_4$, $mp\;184^{\circ}$, Sanjoinine-K, $C_{16}H_{19}NO_3$, $mp\;159{\sim}61^{\circ}$, $[{\alpha}]^{20}_D+35$, Caaverine, $C_{17}H_{17}NO_2$, $mp\;204^{\circ}$, $[{\alpha}]^{20}_D-80$, and Zizyphusine, $C_{20}H_{24}NO_4$, $mp\;214{\sim}6^{\circ}$, $[{\alpha}]^{20}_D+317$ as being aporphine alkaloids. The heat treatment of the cyclic peptide alkaloids produced their isomeric products which showed enhanced sedative activity. The chemical structure of the isomeric products will be discussed.

• 미생물학회지
• /
• 제49권1호
• /
• pp.8-16
• /
• 2013

sndA 유전자(AN3911) 하위에 위치하고 있는 GAL4형 전사인자를 암호화하는 유전자(AN3912)에 대해 분석하였다. 이 전사인자는 Zn(II)2Cys6 binuclear cluster DNA-binding domain 과 전사활성부위를 모두 가지고 있는 전형적 진균 특이 전사인자로서 해당 유전자는 gtfA (gal4 type transcription factor)라 명명되었다. 이 유전자의 ORF는 762개의 아미노산으로 구성되어 있고 3개의 intron이 그 안에 존재하였다. gtfA 유전자의 결실돌연변이는 무성포자생성이 감소하고 대신 유성생식기관이 증가하는 형질을 보여주었다. 과다발현균주는 높은 포도당 농도가 주어지면 유성생식이 늦어지는 형질을 나타내었다. gtfA 유전자는 영양생장 후반부와 유성분화 초기단계에서 높은 발현량을 보이고 전생활사를 통해 비교적 일정하게 발현되었다. gtfA의 전사는 일부 유성(NsdD, VeA) 및 무성(FluG, FadA, SfaD) 분화 조절자들에 의해 크게 영향을 받지 않았다. 반면 GtfA는 nsdC 유전자의 발현을 억제하는 것으로 나타났다. 종합하여 볼 때, GtfA는 분화 결정시기에 nsdC의 발현을 억제함으로써 유성분화보다는 무성분화로 유도되도록 조절 할 것으로 추정된다.

• 한국미생물·생명공학회지
• /
• 제37권4호
• /
• pp.293-305
• /
• 2009

메탄은 온실효과가 이산화탄소 보다 20배 이상인 대표적인 non-$CO_2$ 온실가스이다. 매립지는 주요 인위적 메탄 발생원으로, 매립지의 메탄 발생량은 연간 35~73 Tg(tera gram)으로 추정된다. 바이오커버(개방형 시스템)과 바이오필터(폐쇄형 시스템)을 이용하는 생물학적 방법은 메탄을 회수하여 자원화하기에는 메탄 농도가 너무 낮거나 가스 포집정이 설치되어 있지 않는 노후화된 매립지나 소규모 매립지로부터 메탄 배출을 저감할 수 있는 유용한 방법이다. 메탄을 유일탄소원과 에너지원으로 활용하는 메탄산화세균은 이러한 생물학적 방법에 있어 메탄을 산화시켜 제거하는데 매우 중요한 역할을 담당한다. 토양, compost, 지렁이 분변토 등과 같은 다양한 충전재를 이용하여 실험실 규모의 바이오커버/바이오필터의 메탄산화효율에 관한 많은 연구가 진행되었다. 이 중에서 compost는 가장 많이 이용되고 있는 충전재이고, compost를 이용한 바이오커버/바이오필터의 메탄산화속도는 50에서 $700\;g-CH_4\;m^{-2}\;d^{-1}$로 보고되고 있다. 또한, 실제 매립지에 파일럿 규모의 바이오커버/바이오필터를 설치하여 메탄 배출 저감 효과에 관한 연구도 진행되고 있다. 매립지의 메탄 배출 저감은 탄소배출권 거래와 연관될 수 있으므로, 바이오커버/바이오필터에 의한 메탄 저감량을 정확하게 평가하는 것이 매우 중요하다. 그러므로, 매립지 현장에 설치된 바이오커버/바이오필터의 성능을 평가하는 방법은 표준화되어야 하며, 메탄 저감량을 정확하게 정량화할 수 있는 방법 개발이 필요하다.