• Title/Summary/Keyword: exponential analysis

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Isolation and Characterization of a Formate Dehydrogenase cDNA in Poplar (Populus alba ${\times}$ P. glandulosa) (현사시나무에서 Formate Dehydrogenase cDNA의 분리와 특성 구명)

  • Bae, Eun-Kyung;Lee, Hyoshin;Lee, Jae-Soon;Choi, Young-Im;Yoon, Seo-Kyung;Eo, Soo Hyung
    • Journal of Korean Society of Forest Science
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    • v.102 no.3
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    • pp.331-337
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    • 2013
  • Formate dehydrogenase (FDH), catalyzing the oxidation of the formate ion to carbon dioxide, is known as the stress protein in response to drought, low temperature and pathogen infection. To study the functions of FDH in poplar (Populus alba ${\times}$ P. glandulosa), we isolated a FDH cDNA (PagFDH1) and examined its expressional characteristics. The PagFDH1 is 1,499 base pairs long and encodes a putative 388 amino acid protein with an expected molecular mass of 42.5 kDa. The PagFDH1 protein has N-terminal mitochondria signal peptide and $NAD^+$ binding domain. Southern blot analysis indicated that a single copy of the PagFDH1 is present in the poplar genome. PagFDH1 is expressed highly in the suspension cells (especially in the lag and early exponential phases) and moderately in roots, flowers and leaves. ABA-mediated enhanced expression of PagFDH1 in response to drought and salt stress treatments indicates that the gene product could play an important role in the development of stress resistant trees.

Isolation and Characterization of Bacillus subtilis CA105 from Spent Mushroom (Pleurotus ostreatus) Substrates (느타리버섯 수확후배지로부터 분리한 Bacillus subtilis CA105의 특성)

  • Kim, Hye Soo;Kim, Chul Hwan;Kwon, Hyun Sook;Lee, Chan-Jung;Kong, Won-Sik;Cho, Soo Jeong
    • Journal of Mushroom
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    • v.13 no.4
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    • pp.305-309
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    • 2015
  • In order to isolate compost-promoting bacteria with high activity of cellulase and xylanase, spent mushroom substrates with sawdust were collected from mushroom cultivation farm, Jinju, Gyeongnam in Korea. Among of the isolates, one strain, designated CA105 was selected by agar diffusion method. The strain CA105 was identified as members of the Bacillus subtilis by biochemical characteristics using VITEK 2 system. Comparative 16S rRNA gene sequence analysis showed that isolate CA105 formed a distinct phylogenetic tree within the genus Bacillus and was most closely related to Bacillus subtilis with 16S rRNA gene sequence similarity of 98.9%. On the basis of its physiological properties, biochemical characteristics and phylogenetic distinctiveness, isolate CA105 was classified within the genus Bacillus subtilis, for which the name Bacillus subtilis CA105 is proposed. The cellulase and xylanase activity of B. subtilis CA105 was slightly increased according to bacterial population from exponential phase to stationary phase in growth curve for Bacillus sp. CA105.

Studies on the Textural Characteristics and the Standard for Cheese Products (치즈 제품의 조직특성 및 규격연구)

  • 함준상;정석근;김현수;홍경현;조은정;안종남;이종문
    • Food Science of Animal Resources
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    • v.23 no.1
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    • pp.70-74
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    • 2003
  • Cheese consumption in Korea has continuously increased far the last decades by industrialization and globalization. In addition, import of fresh cheese has increased from 2 tons, and 30 thousand dollars in 1991 to 20 thousand tons, and 49 million dollars in 2001. However, Korea standard for cheese differs from CODEX, and is not consistent. To investigate more proper standards for cheese, 20 natural cheeses and 17 process cheeses were obtained from market and analysed. All the cheeses except 1 soft cheese met the standard, but 'unripened cheese' was not different from 'soft cheese' in milk solid content. Natural cheese firmness showed exponential inverse relationship(R=0.8226) to moisture on a fat-free basis(MFFB) which is used for the natural cheese standard in CODEX. Therefore, it was thought appropriate to refer to CODEX standard for using textural terminology in Korea standard for natural cheese. For process cheese, milk solid cant be estimated by the analysis, and there are no merits and penalties by the classification. It was thought proper to classify the process cheese by types, such as 'Powder', 'Slice', 'Spread', and 'Portion'. Rule for 15∼34% milk solid content of products should be prepared in standard for animal products as 'Process cheese products' for the promotion of development and consumption of cheese.

Rapid and Precise Determination of Pb Isotope Ratios Using Mu1ti-Collector ICP/MS (다검출기 유도결합 플라즈마 질량분석기를 이용한 신속하고 정밀한 Pb 동위원소 분석)

  • 최만식;정창식;신형선;임태선
    • The Journal of the Petrological Society of Korea
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    • v.10 no.3
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    • pp.157-171
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    • 2001
  • This study investigated the effects of Pb/Tl ratio, Pb concentration and concomitant matrix elements on the measurement of Pb isotope ratios using multi-collector ICP/MS (AXIOM MC model). Accuracy and reproducibility of Pb isotope ratios in NBS 981 solution were estimated for 42 data measured from March to August 2001. Pb isotopes measured in rocks, bronzes and sediments were compared to data measured by TIMS. Reproducibilities for $^{206}Pb/^{204}Pb,\; ^{207}Pb/^{204}Pb,\;and\;^{208}Pb/^{204}Pb$ ratio were about 500 ppm (2sd) and for $^{207}Pb/^{206}Pb$\;and\;^{208}Pb/^{206}Pb$ were 100~200 ppm for 200 ng of Pb in NBS 981 solution. The optimum conditions for the analysis of Pb isotope ratios with AXIOM MC for best accuracy and reproducibility were defined as follows; 1) Pb/Tl ratio is about 10 2) Pb concentration is about 100 ng/ml 3) correction for mass discrimination is performed by exponential law using 2.3887 of $^{205}Tl/^{203}Tl$ and Pb mass fractionation factor empirically obtained from $ln(^{208}Pb/^{206}Pb)-ln(^{205}Tl/^{203}Tl)$ relationship. The sample data measured with MC/ICP/MS for acid-digested and chemically separated rock samples, and acid-digested bronze samples and sediment samples coincide with those of TIMS within analytical errors. Therefore, MC/ICP/MS is a rapid analytical technique for Pb isotope ratios with the similar precision compared with TIMS.

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Isolation and Characterization of Alga-Lytic Bacterium HY0210-AK1 and Its Degradability of Anabaena cylindrica (남조류 분해세균 HY0210-AK1의 분리와 특성 및 Anabaena cylindrica 분해 활성)

  • 장은희;김정동;한명수
    • Korean Journal of Environmental Biology
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    • v.21 no.2
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    • pp.194-202
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    • 2003
  • To isolate alga-lytic bacteria, a number of samples were collected from Lake of Sukchon and Pal'tang reservoir where cyanobacteria blooming occurred. HY0210-AK1, which exhibited high alga-lytic activity, was isolated using Anabaena cylindrica lawn. The morphological and biochemical characteristics of the isolate HY0210-AK1 were very similar to that of the genus Rhizobium. Taxonomic identification including 16S rDNA base sequencing and phylogenetic analysis indicated that the isolate Hy0210-AK1 had a 99.1% homology in its 16S rDNA babe sequence with Sphingobium herbicidovorans. A. cylindrica NIES-19 was susceptible to the alga-lytic bacterial attack. The growth-inhibiting offset of the bacterium was not different on A. cylindrica NIES-19 when Sphingobium herbicidovorans HY0210-AK1 was in the lag, exponential, and stationary growth phase, although the alga-Iytic effect of S. herbici-dovorans HY0210-AK1 that in stationary growth phase was somewhat pronounced at the first time of inoculation. When S. herbicidovorans HY0210-AK1 was inoculated was inoculated with $1\times 10^{8}$ CFU $ml^{-1}$ together with A cylindrica NIES-19, the bacterium proliferated and caused algal lysis. A. cylindrica NIES-19 died when S. herbicidovorans HY0210 AKl was added to the algal culture but not when duly the filtrates from the bacterial culture was added. This suggests that extracellular substances are not responsible for inhibition of A. cylindrica NIES-19 and that algal Iysis largely attributed to direct interaction between S. herbicidovorans HY0210-AK1 and A. cylindrica NIES-19. The alga-lytic bacterium HY0210-AK1 caused cell lysis and death of three strain of Micro-cystis aeruginosa, but revealed no alga-Iytic effects on the Stephanodiscus hantzschii.

Determination of Water-to-Binder Ratios on the Equivalent Compressive Strength of Concrete with Supplementary Cementitious Materials (혼화재 치환 콘크리트의 등가 압축강도에 대한 물-결합재비의 결정)

  • Yoon, Hyun-Sub;Yang, Keun-Hyeok
    • Journal of the Korea Concrete Institute
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    • v.27 no.6
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    • pp.687-693
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    • 2015
  • The present study proposed a k-value to determine the water-to-binder ratio of concrete using fly ash (FA) or ground granulated blast-furnace slag (GGBS) as a partial replacement of ordinary portland cement (OPC) with regard to an equivalent strength of OPC concrete. From the regression analysis using an extensive database including 7076 concrete mixes, k-values were determined for various water-to-binder ratios when the replacement ratio of OPC by the addition of FA or GGBS were below 50%. For deriving an equation to identify k-value, the relationship of concrete compressive strength and water-to-binder ratio was generalized by an exponential function. In general, k-values decreased with the increases in the addition of FA or GGBS for replacement of OPC and water-to-binder ratio. The rate in decreasing k-value against water-to-binder ratio was marginally affected by the addition of FA or GGBS, although a higher k-value was commonly obtained for GGBS concrete than for FA concrete at the same water-to-binder ratio. Consequently, the determined k-values were simplified as a function of water-to-binder ratio and the addition ratio of FA or GGBS as replacement of OPC.

Biofiltration Efficiency of Saccharina japonica for Integrated Multi-Trophic Aquaculture (IMTA) (다영양입체양식을 위한 다시마(Saccharina japonica)의 생물여과효과)

  • Park, Mi-Seon;Min, Byung-Hwa;Kim, Young-Dae;Yoo, Hyun-Il
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.45 no.4
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    • pp.351-357
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    • 2012
  • To determine whether the seaweed Saccharina japonica can effectively utilize dissolved nutrients from Sebastes schlegeli fish cultures, a laboratory experiment was conducted in a static system for 7 days at ESFRI, NFRDI in Korea. The experiment included an S. schlegeli monoculture system and an S. schlegeli-S. japonica IMTA system. Saccharina schlegeli density ($415{\pm}24g$; mean${\pm}$SE) remained the same in all treatments, whereas seaweed density varied across treatments of 0, 0.5, 1, 2, and 3 kg (control and T1-T4, respectively). During the experiment, nutrient ($NH_4^+$ and $PO_4^{3-}$) concentrations were measured at 24-h intervals. $NH_4^+$ concentration of the control group increased from $0.117{\pm}0.021mg/L$ at the start of experiment to $5.836{\pm}0.904mg/L$ at the end of experiment. $NH_4^+$ concentrations of each treatment were $3.004{\pm}0.040$, $2.086{\pm}0.133$, $1.642{\pm}0.121$ and $0.775{\pm}0.007mg/L$ in T1, T2, T3, and T4, respectively, at the end of experiment. The concentration of $PO_4^{3-}$ exhibited a similar trend to $NH_4^+$ concentration. $NH_4^+$ and $PO_4^{3-}$ concentrations significantly decreased with increased S. japonica thallus density each day (P<0.05). The nutrient removal efficiency (NRE) and nutrient uptake rate (NUR) showed different relationships with changes in thallus density; NRE increased but NUR decreased as thallus density increased. Based on measured concentrations of $NH_4^+$ and S. japonica weight, regression analysis defined the relationship between as an exponential function, $Y=3.8165e^{-0.505X}$ ($R^2$ = 0.9552). Our results demonstrated that S. japonica can function as an efficient component in IMTA with environmental and potentially economic benefits for fish hatcheries.

A Study on Clogging and Water Quality Improvement in Floodplain Filtration with Flood/rest Raw-water Supply (범람/휴지식 홍수터여과에서 폐색현상 및 수질개선도 연구)

  • Kim, Hoh-Seok;Kim, Seung-Hyun
    • Journal of Korean Society of Environmental Engineers
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    • v.33 no.2
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    • pp.120-131
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    • 2011
  • A pilot-scale experiment of floodplain filtration with a filtration depth of 3.6m was performed employing flood/rest type raw-water supply system in an effort to find ways to improve river water quality by additional treatments of discharged effluent from sewage treatment plant. Soil samples were taken from 3 sites including Gumi, Daegu and Gimhae along the Nakdong river. Reductions of infiltration rates following increases in operating time was investigated in each soil sample, along with the analysis of removal efficiencies of various pollutants according to different depths and infiltration rates. The results show incremental development of clogging on the soil surface with increases in operation time, and illustrate exponential decrease in the infiltration rate. The time required for the removal of the clog from the soil surface was longer than 2 weeks for all soil samples analyzed. The stable infiltration rates for soils were 5 m/day for Gumi and for Daegu and Gimhae was 1 m/day. In unsaturated soils dissolved oxygen levels increased following the increase of filtration depth, suggesting that alternating application of flood and rest for raw-water supply effectively keeps the soil environment aerobic. For all soils, the nature of pollutant removal depending on the depth of filtration remained the same regardless of the infiltration rate. Most of the BOD and turbidity were removed within 1.2 m, about 30% of COD was removed within 3.6m and was expected to be removed further with increases in filtration depth. Nitrification occurred near the surface of all soils; however there was no significant removal of nitrogen in the filtration depths tested in this study. Although removal rate of phosphorus was low for Gumi's soil, it was high enough for other soils, suggesting that the method developed in this study could significantly improve river water quality.

Assessment of fish stocks and economic value in accordance with fishway renovation: Case study of Samcheokoshipcheon0010 Weir (어도 개보수에 따른 어류 자원량 및 경제적 가치 평가: 삼척오십천 사례)

  • Moon, Woon-Ki;Bae, Dae-Yeul;Kim, Do-Hyun;Shin, Hyun-Beom;Suh, Jung Bin;Lim, Kyeong Hun;Lee, Eui-Haeng;Yoo, Jae-Sang;An, Kwang-Guk;Kim, Jai-Ku
    • Korean Journal of Environmental Biology
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    • v.38 no.1
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    • pp.30-39
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    • 2020
  • The changes in fish stock and biomass before and after fishway renovation located in a Korean estuary were studied and fluctuations in the economic value of the fish resources were estimated. The target fishway located in the east coast area in Korea was renovated in 2014 from the small fish ladder to the ice-harbor fishway. Monitoring was continued for five consecutive years after the renovation(2015 to 2019). Since the renovation of the fish passage, the economic values increased with increases in the fishery resources, except for in 2016 when the drought impact was severe. The yearly average incremental increase in the five years after the renovation was about 227%. The increase in economic value is believed to be due to the increased population of migratory fish as a result of habitat expansion. The exponential rise model showed an increase in economic value with increasing fishery resources (R2=0.896). The model coefficient contributing to economic analysis was 0.582 and the maximum economic value after the renovation was estimated at about 30.4 million. The economic value would be a useful index for quantitative comparison in terms of ecosystem services before and after renovation.

Growth Curves Fitting for Body Weight and Backfat Thickness of Swine by Sex (성별에 따른 돼지 체중 및 등지방두께 성장곡선 추정)

  • Choi, Te-Jeong;Seo, Kang-Seok;Choi, Je-Gwan;Kim, Si-Dong;Cho, Kwang-Hyun;Choe, Ho-Sung
    • Food Science of Animal Resources
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    • v.28 no.2
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    • pp.187-195
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    • 2008
  • The purpose of this study was to establish proper shipping weight and backfat thickness by applying the growth model to backfat thickness, measured by means of not only body weight, but also ultrasonography, and predicting the changes by age. Three breeds, i.e. Duroc, Landrace, and Yorkshie, were analyzed, and the Gompertz, logistic, and Von Bertalanffy model were used for inference with the parameter of the growth model being sex. As a result, both body weight and backfat thickness showed different growth curve parameters and characteristics at inflection points depending on model selection and sex. As for backfat thickness, in estimating the inflection point, unlike the case of body weight, the inflection ages of the boars of the Duroc breed was earlier than that of sows, whereas the inflection ages of the sows of the Landrace and Yorkshire breeds was earlier than that of boars. More than anything else, in the analysis of the changes in backfat thickness according to body weight, as the body weight reached 145kg, the backfat thickness showed much variation as great as 1.7-3.2 cm in each breed and sex. In addition, unlike the other breeds, the boars of the Landrace breed showed an exponential type of relationship between body weight and backfat thickness. As they grow to become 100 kg or heavier, abrupt change in back fat thickness was confirmed. If the growth of body weight and backfat thickness is understood and the genetic relationship is taken advantage of like this, it would be possible to set desired body weight and backfat thickness, and thus help effectively set the shipping time. If not only the phenotype, but also genetic parameters about growth characteristics are estimated and analyzed additionally, more effective data can be generated.