• Title/Summary/Keyword: ecotype

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Determination Times for Induction of Adventitious Shoots, Roots, Trichomes, and Calli from Segments of Arabidopsis thaliana by NAA and BA (애기장대(Arabidopsis thaliana)잎 절편에서 NAA와 BA에 의한 신초, 부정근, 모용 및 캘러스 형성 결정 시기)

  • Kim, Song-Lim;Han, Tae-Jin
    • Journal of Plant Biotechnology
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    • v.30 no.2
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    • pp.161-165
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    • 2003
  • The effect of NAA and Benzyladenine(BA) for determination times on the formation of adventitious shoots, roots trichmoes and calli in MS basal medium was investigated in leaf segments from ecotype 'Nosses' of Arabidopsis thalliana. Adventitious shoots, roots, trichomes and calli were formed fromed from leaf segments in a wede range of NAA and BA. The optimal combination of hormones for adventitious shoots formation, 20mg/L NAA for trichome formation, 100mg/L for callus formation. Inductive times for formation of adventitious shoots, roots, trichomes and calli were determined at 14, 4, 6 and 18 days respectively by periodical transfer of leaf segments from hormines containing media to hormone free medium.

The complete mitochondrial genome of Arabidopsis thaliana (Brassicaceae) isolated in Korea

  • PARK, Jongsun;XI, Hong;KIM, Yongsung
    • Korean Journal of Plant Taxonomy
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    • v.51 no.2
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    • pp.176-180
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    • 2021
  • Arabidopsis thaliana (L.) Heynh. is a small plant species that serves as a model organism of plant biology and genetics. Here, we present the first complete mitochondrial genome of Korean A. thaliana natural isolate (named as 180404IB4), which is 368,875 bp long and contains 58 genes (33 protein-coding genes, 22 tRNAs, and three rRNAs), with a GC ratio of 44.8%. Sixty-four single-nucleotide polymorphisms and 11 insertion and deletion regions (1,089 bp in length) are identified against the Col-0 ecotype, showing one large insertion of 1,069 bp without structural variation. Phylogenetic trees constructed from 30 conserved genes indicate that the 180404IB4 mitochondrial genome is clustered with Col-0 and three East Asian ecotypes.

Variations of Yields and Growth-related Characteristics shown by Different Ecotype of Rice Varieties in the Temperate and Tropical Zones III. Response of Korean Varietes on Different SeedJing Age in Equatorial Tropics (온대와 열대에서 생태형이 다른 수도품종의 수량 및 생육형질의 변이 III. 열대적도지역에서 묘대일수에 따른 한국품종의 반응)

  • Ro, Kun-Kil;Lee, Eun-Woong;Lim, Moo-Sang
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.32 no.1
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    • pp.1-4
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    • 1987
  • Korean varieties were tested at two different seedling ages in equatorial tropics to review nursery period. The 20-day old seedlings did not make any difference from 30-day old seedlings in heading time and yield performance. Korean cultivation method with wider planting-space and more fertilizer application gave better result than Indonesian method having narrower planting space and less fertilizer application.

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Dry-heat Treatment Effect for Seed Longevity Prediction in Rice Germplasm (벼 유전자원의 저장수명 예측을 위한 건열처리 효과)

  • Na, Young-Wang;Baek, Hyung-Jin;Choi, Yu-Mi;Lee, Sok-Young;Lee, Jung-Ro;Chung, Jong-Wook;Park, Yong-Jin;Kim, Seok-Hyeon
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.59 no.3
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    • pp.230-238
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    • 2014
  • The purpose of this study was to develop the cost-effective and efficiency seed longevity prediction method of rice (Oryza sativa L.) germplasm for viability monitoring. To find an optimum predicting method for rice seed longevity at genebank, an accelerated ageing (AA) test, a controlled deterioration (CD) test and a dry-heat treatment (DHT) were conducted to the four groups of rice germplasm based on ecotype, such as Indica, Japonica, Javanica and Tongil type. Among the three artificial aging treatments, the dry-heat treatment of 36 hours at $90^{\circ}C$ is suggested as a routine predictive test method of rice germplasm longevity at a genebank. The distribution of germination rate on 3,066 accessions which conserved 26.5 years at $4^{\circ}C$ showed similar trend with the result of distribution by dry-heat treatment at $90^{\circ}C$ on 36 hours using 106 accessions of rice selected samples which composed four ecotype groups. The results show that the dry-heat treatment affect not only predicting the rice seed longevity but also determining effective interval for monitoring germination of rice germplasm in genebanks.

Seed Yields and Germination Rates of Native Ecotype Collections for the Development of High-Yield Seeded Variety of Zoysiagrass in Korea (다수확 종자형 품종 육성을 위한 자생 한국잔디 수집계통들의 종자 수확량과 발아율)

  • Bae, Eun-Ji;Han, Jeong-Ji;Choi, Su-Min;Lee, Kwang-Soo;Park, Yong-Bae;Yang, Geun-Mo;Choi, Joon-Soo
    • Weed & Turfgrass Science
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    • v.5 no.2
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    • pp.95-100
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    • 2016
  • Seeded variety of zoysiagrass has not been bred yet in Korea. Development of seeded zoysiagrass cultivar will be very important for the growth of turfgrass industry internationally as well as domestically. This research was conducted to investigate seed yield and germinability of 102 collected native zoysiagrass ecotypes in South Korea. Two hundred and seventy seven ecotypes were collected from various locations including coastal and mountain areas, while 102 morphologically distinct and seed producing ecotypes were selected and planted in $1m{\times}1m$ maintenance plots. Seed yield ranged from 0.1 to $32.2g\;m^{-2}$. Highest yielding line was a medium leaf type zoysiagrass of Z6011 with $32.2g\;m^{-2}$. Most collected lines showed seed germination rates of below 50%. However, Z2095 showed highest germination rate of 78%. Considering germination rate and seed yield, collected lines of Z6011, Z 6015, Z1075, ZN1008, and Z1084, which were mostly medium leaf type and Z. japonica types, showed reasonably high potential to be used as breeding lines for high yield seed varieties of zoysiagrass.

EFFECTS OF UV-B RADIATION ON GROWTH AND DEVELOPMENT OF RICE CULTIVARS (ORYZA SATIVA L.).

  • T.Kumagai;Kang, H.S.;J.Hidema;T.Sato
    • Proceedings of the Botanical Society of Korea Conference
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    • 1994.09a
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    • pp.29-39
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    • 1994
  • Serious issues about the changes in the environmental conditions on earth associated with human activities have arisen, and the interest in these problems has increased. It is urgent to determine how the expansion of terrestrial UV-B radiation due to the stratospheric ozone depletion influences living matters. In this connection, we have been investigating the effects of UV-B radiation on the growth of rice cultivars (Oryza sativa L.). We report here some physiological and genetic aspects of resistance to inhibitory effects of UV-B radiation on growth of rice cultivars as described below. Elevated UV radiation containing large amount of UV-B and a small amount of UV-C inhibited the development of plant height, the photosynthetic rate and the chlorophyll content in rice plants in a phytotron. Similar results were obtained in experiments, in which elevated UV-V radiation. Similar results were obtained in experiments, in which elevated UV-B radiation (transmission down to 290 nm) was applied instead of UV-B radiation containing a small amount of UV-C. The inhibitory effects of UV radiation was alleviated by the elevated CO2 atmospheric environment or by the exposure to the high irradiance visible radiation. The latter suggested the possibility that the resistance to the effects of UV radiation was either due to a lower sensitivity to UV radiation or to a greater ability to recover from the injury caused by UV radiation through the exposure to visible radiation. The examination of cultivar differences in the resistance to UV radiation-caused injuries among 198 rice cultivars belonging to 5 Asian rice ecotypes (aus, aman, boro, bulu and tjeleh) from the Bengal region and Indonesia and to Japanese lowland and upland rice groups showed the following: Various cultivars having different sensitivities to the effects of UV radiation were involved in the same ecotype and the same group, and that the Japanese lowland rice group and the boro ecotype were more resistant. Among Japanese lowland rice cultivars, Sasanishiki (one of the leading varieties in Japan) exhibited more resistance to UV rakiation, while Norin 1 showed less resistance, although these two cultivars are closely related. It was thus indicated that the resistance to the inhibitory effects of UV radiation of rice cultivars is not simply due to the difference in the geographical situation where rice cultuvars are cultivated. Form the genetic analysis of resistance to the inhibitory effects of UV radiation on growth of rice using F2 plants generated by reciprocally crossing Sasanishiki and Norin 1 and F3 lines generated by self-fertilizing F2 plants, it was evident that the resistance to the inhibitory of elebated UV radiation in these rice plants was controlled by recessive polygenes.

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Flowering, a Critical Phenological Stage as a Limiting Factor for Almond Native Ecotypes Cultivation in Eastern Morocco

  • Melhaoui, Reda;Abid, Malika;Mihamou, Atika;Sindic, Marianne;Caid, Hana Serghini;Elamrani, Ahmed
    • Applied Microscopy
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    • v.47 no.3
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    • pp.157-159
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    • 2017
  • This study concerns (i) Botanical characterization of local almond ecotype named "Beldi" based on flowering period and flowers color measurements (ii) Chemical characterization of almond oil such as acidity and peroxide index and specific UV absorbance values (K232 & K270). The color results of 100 flowers analyzed by chromameter shows two different color categories. The first is very light pink to whitish ($L^*=81.58$, $a^*=7.43$, $b^*=8.06$). The second is a dark pink ($L^*=71.64$, $a^*=18.34$, $b^*=4.97$) with a difference in color between the two categories ${\Delta}E=15.07$. Compared to Ferragnes/Ferraduel varieties, Beldi almond kernel has almost a comparable oil yield but different acidity and peroxide values which are 0.81%, $8.12meq/O_2/kg$ and 0.40%, $16.39meq/O_2/kg$ respectively.

Mapping of UV-B sensitive gene in Arabidopsis by CAPS markers (CAPS marker에 의한 Arabidopsis의 자외선 B 감수성 유전자 지도작성)

  • 박홍덕;김종봉
    • Journal of Life Science
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    • v.12 no.6
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    • pp.715-720
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    • 2002
  • A mutant Arabidopsis thaliana which is very sensitive to Ultraviolet-B(UV-B) radiation has been isolated by ethylmethane sulfonate(EMS) mutagenesis. Genetic cross proved the UV-sensitive gene(uvs) to segregate as a single Mendelian locus. For mapping of uvs, we crossed Arabidopsis thaliana Lansberg with uvs plant(Columbia), and made F2 plants by F1 selfcross. We designed 10 kinds of CAPS marker primers. Each primers amplifies a single mapped DNA sequence from uvs and Lansberg erecta ecotyres. Also identified was at least one restriction endonuclase for each of these PCR product that generates ecotype-specific digestion pattern. We got crossing over value of UB-sensitivity and each CAPS marker which located on different chromosome arm. The value of crossing over showed that uvs was linked to LFY3 which was on chromosome 5.

Differential Competitiveness of Echinochloa colona Ecotypes (ECHINOCHLOA COLONA 생태형(生態型)의 경합력(競合力) 차이(差異))

  • Chun, J.C.;Moody, K.
    • Korean Journal of Weed Science
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    • v.7 no.3
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    • pp.247-256
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    • 1987
  • The ability of three Echinochloa colona (L.) Link ecotypes to compete with rice (Oryza sativa L.) was evaluated. For all the ecotypes, E. colona was shorter and produced less leaf area and dry matter than rice at 15 days after seeding (DAS), whereas the reverse was observed from 30 to 60 DAS. Neither E. colona nor rice tillered during the first 15 DAS, but E. colona had greater accumulative tiller length than rice from 15 DAS. Rice absorbed more nitrogen than E. colona at 15 DAS. E. colona absorbed greater amounts of nitrogen, phosphorus, and potassium than did rice between 30 and 60 DAS and increase in its density decreased the nutrients uptake of rice. Differences in the competitive ability of the ecotypes were related to the growth characteristics of the ecotypes and the period of competition between the two species. At the early growth stages the Pangasinan ecotype, which increased plant size rapidly and had a shorter life cycle, was more competitive against rice than the Leyte and South Cotabato ecotypes, which had a longer vegetative growth period. However, the reverse was observed at the later growth stages of the ecotypes.

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Niche partitioning of picocyanobacterial lineages in the oligotrophic northwestern Pacific Ocean

  • Choi, Dong Han;Selph, Karen E.;Noh, Jae Hoon
    • ALGAE
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    • v.30 no.3
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    • pp.223-232
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    • 2015
  • More than 20 and 10 clades / ecotypes of Synechococcus and Prochlorococcus, respectively, have been identified in various oceanic regions. However, their diversity has yet to be thoroughly studied in the northwest Pacific Ocean. Further, spatial distribution of Synechococcus clades in the oligotrophic oceans has been scarcely characterized. To elucidate picocyanobacterial lineage distribution in the northwest Pacific Ocean, 16S-23S internal transcribed spacer sequences of picocyanobacteria were sequenced by barcoded amplicon pyrosequencing method. Additional pyrosequencing library using a primer specific for the Synechococcus subcluster-5.1 was constructed to thoroughly understand Synechococcus diversity in the oligotrophic oceans. In warm pool area, Prochlorococcus was predominant and showed a distinct depthpartitioning between HLII and LL ecotypes. Despite low abundances, diverse Synechococcus clades appeared in the oligotrophic open ocean, showing both vertical and horizontal niche partitioning. Clade II was the predominant Synechococcus clade, especially in upper euphotic depths. In shallow and middle euphotic depths, clades UC-A, III, and CRD1 were distributed broadly. However, a distinct shift in the horizontal distribution was found at ca. $20^{\circ}N$. Conversely, clades XVII and CRD2 dominated at deep euphotic depths and constituted a higher proportion than clade II. These niche-partitioning of Synechococcus clades seemed to be related with temperature, nutrient concentration as well as iron concentration.