• Title/Summary/Keyword: cultivated soybean

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RNA-seq Gene Profiling Reveals Transcriptional Changes in the Late Phase during Compatible Interaction between a Korean Soybean Cultivar (Glycine max cv. Kwangan) and Pseudomonas syringae pv. syringae B728a

  • Myoungsub, Kim;Dohui, Lee;Hyun Suk, Cho;Young-Soo, Chung;Hee Jin, Park;Ho Won, Jung
    • The Plant Pathology Journal
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    • v.38 no.6
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    • pp.603-615
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    • 2022
  • Soybean (Glycine max (L) Merr.) provides plant-derived proteins, soy vegetable oils, and various beneficial metabolites to humans and livestock. The importance of soybean is highly underlined, especially when carbon-negative sustainable agriculture is noticeable. However, many diseases by pests and pathogens threaten sustainable soybean production. Therefore, understanding molecular interaction between diverse cultivated varieties and pathogens is essential to developing disease-resistant soybean plants. Here, we established a pathosystem of the Korean domestic cultivar Kwangan against Pseudomonas syringae pv. syringae B728a. This bacterial strain caused apparent disease symptoms and grew well in trifoliate leaves of soybean plants. To examine the disease susceptibility of the cultivar, we analyzed transcriptional changes in soybean leaves on day 5 after P. syringae pv. syringae B728a infection. About 8,900 and 7,780 differentially expressed genes (DEGs) were identified in this study, and significant proportions of DEGs were engaged in various primary and secondary metabolisms. On the other hand, soybean orthologs to well-known plant immune-related genes, especially in plant hormone signal transduction, mitogen-activated protein kinase signaling, and plant-pathogen interaction, were mainly reduced in transcript levels at 5 days post inoculation. These findings present the feature of the compatible interaction between cultivar Kwangan and P. syringae pv. syringae B728a, as a hemibiotroph, at the late infection phase. Collectively, we propose that P. syringae pv. syringae B728a successfully inhibits plant immune response in susceptible plants and deregulates host metabolic processes for their colonization and proliferation, whereas host plants employ diverse metabolites to protect themselves against infection with the hemibiotrophic pathogen at the late infection phase.

Case studies for estimation nitrogen and phosphorous balance with different cropping systems in upland (현장사례를 통한 밭 작부의 질소와 인산양분 수지 평가)

  • Yun, Hong-Bae;Lee, Sang-Min;Kim, Myung-Sook;Lee, Ye-Jin;Lee, Yeoun;Lee, Jong-Sik
    • Korean Journal of Soil Science and Fertilizer
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    • v.44 no.5
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    • pp.762-766
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    • 2011
  • Cropping system is very important for environment conservation and improvement of nutrient recovery rates in agricultural land. This case study was conducted to identify the nutrient balance of major upland cropping types with different districts. Typical cropping systems at MuAn and HaeNam located in the south coast district were cultivated with soybean-chinese cabbage or garlic and garlic-soybean-chinese cabbage-hot pepper. Alpine district, PyeongChang was cultivated with double cropping of chinese cabbage and potato-radish or chinese cabbage for one year. Typical cropping type of AnDong, YeongYang where are well known for hot pepper cultivation was hot pepper's mono cropping and hot pepper-soybean or hot pepper-sesame for one year. But SeoSan and HongSeong, where are located in mid-west coast had variety cropping system compareed to other districts. Double cropping of chinese cabbage, a heavy fertilizing crop, caused higher nutrient balance in the field when it was cultivated consistently. Experiment showed that heavy fertilizing crops, such as chinese cabbage, garlic and onion, need to be rotated with soybean and sesame cultivation which need smaller fertilizer level. Alpine arable land has shown higher nutrient balance than other areas, and the introduction of rotation crops are needed to reduce nutrient balance and environmental protection.

Biological Activities of Soyasaponins and Their Genetic and Environmental Variations in Soybean (콩 Saponin의 생리활성 기능과 함량변이)

  • 김용호
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.48
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    • pp.49-57
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    • 2003
  • There is much evidence suggesting that compounds present in soybean can prevent cancer in many different organ systems. Especially, soybean is one of the most important source of dietary saponins, which have been considered as possible anticarcinogens to inhibit tumor development and major active components contributing to the cholesterol-towering effect. Also they were reported to inhibit of the infectivity of the AIDS virus (HIV) and the Epstein-Barr virus. The biological activity of saponins depend on their specific chemical structures. Various types of triterpenoid saponins are present in soy-bean seeds. Among them, group B soyasaponis were found as the primary soyasaponins present in soybean, and th e 2, 3-dihydro-2, 5-dihydroxy-6- methyl-4H-pyran-4-one(DDMP)-conjugated soyasaponin $\alpha\textrm{g}$, $\beta\textrm{g}$, and $\beta$ a were the genuine group B saponins, which have health benefits. On the other hand, group A saponins are responsible for the undesirable bitter and astringent taste in soybean. The variation of saponin composition in soybean seeds is explained by different combinations of 9 alleles of 4 gene loci that control the utilization of soyasapogenol glycosides as substrates. The mode of inheritance of saponin types is explained by a combination of co-dominant, dominant and recessive acting genes. The funtion of theses genes is variety-specific and organ specific. Therefore distribution of various saponins types was different according to seed tissues. Soyasaponin $\beta\textrm{g}$ was detected in both parts whereas $\alpha\textrm{g}$ and $\beta$ a was detected only in hypocotyls and cotyledons, respectively. Soyasaponins ${\gamma}$g and $\gamma\textrm{g}$ were minor saponin constituents in soybean. In case group A saponins were mostly detected in hypocotyls. Also, the total soyasaponin contents varied among different soy-bean varieties and concentrations in the cultivated soy-beans were 2-fold lower than in the wild soybeans. But the contents of soyasaponin were not so influenced by environmental effects. The composition and concentration of soyasaponins were different among the soy products (soybean flour, soycurd, tempeh, soymilk, etc.) depending on the processing conditions.

Effects of Transgenic Soybean Cultivation on Soil Microbial Community in the Rhizosphere (형질전환 콩 재배가 근권 토양 미생물상에 미치는 영향)

  • Lee, Ki-Jong;Sohn, Soo-In;Lee, Jang-Yong;Yi, Bu-Young;Oh, Sung-Dug;Kweon, Soon-Jong;Suh, Seok-Choel;Ryu, Tae-Hun;Kim, Kyung-Hwan;Park, Jong-Sug
    • Korean Journal of Environmental Agriculture
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    • v.30 no.4
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    • pp.466-472
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    • 2011
  • BACKGROUND: Soybean [Glycine max (L.) Merrill] is a legume and an important oil crop worldwide. This study was conducted to evaluate the possible impact of transgenic soybean cultivation on the soil microbial community. METHODS AND RESULTS: Microorganisms were isolated from the rhizosphere soils. Microbial community was identified based on the culture-dependent and molecular biology methods. The total numbers of bacteria, fungi, and actinomycete in the rhizosphere soils cultivated with transgenic and non-transgenic soybeans were similar to each other, and there was no significant difference between transgenic and non-transgenic soybeans. Dominant bacterial phyla in the rhizosphere soils cultivated with transgenic or non-transgenic soybeans were Actinobacteria, Firmicutes, and Proteobacteria. The microbial communities in transgenic and non-transgenic soybean soils were characterized using the denaturing gradient gel electrophoresis (DGGE). The DGGE profiles showed the different patterns, but didn't show significant difference to each other at 0.05 significance level. DNAs were isolated from soils cultivating transgenic or non-transgenic soybeans and analyzed for persistence of transgenes in the soil by using PCR. PCR analysis revealed that there were no amplified ${\gamma}$-tmt and bar gene in soil DNA. CONCLUSION(S): The results of this study suggested that microbial community of soybean field were not significantly affected by cultivation of the transgenic soybeans.

Quality and Physicochemical Characteristics of Small Black Soybean Cultivar Cultivated in the North-central Region (중북부지역에서 재배한 소립 검정콩의 품질 및 이화학 특성)

  • Kim, Hyun-Joo;Jung, Gun Ho;Lee, Ji Hae;Lee, Byong Won;Lee, Yu Young;Kim, Sung Kook;Lee, Byoung Kyu;Woo, Koan Sik
    • The Korean Journal of Food And Nutrition
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    • v.31 no.6
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    • pp.792-801
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    • 2018
  • Proximate compositions, quality and physicochemical characteristics of small black soybean cultivar, cultivated in the north-central region of South Korea with different seeding periods, were evaluated. Proximate compositions, chromaticity, water binding capacity, water solubility index, swelling power, and antioxidant properties were significantly different among cultivars and different seeding periods. Moisture, crude ash, fat, protein, and carbohydrate contents of small black soybean cultivar were 5.53~6.69, 5.47~6.54, 15.38~19.14, 34.17~40.26, and 32.04~36.85 g/100 g, respectively. Lightness, redness and yellowness were 35.60~38.61, -0.02~0.07 and -0.56~-0.13, and water binding capacity, water solubility index and swelling power were 84.48~148.31, 46.65~54.89 and 29.87~35.12%, respectively. Total polyphenol contents of first, second, and third seedings on small black soybean cultivar were 10.40~15.48, 9.86~14.85 and 8.61~15.39 mg GAE/g; total flavonoid contents were 5.81~7.25, 5.81~7.34 and 5.52~7.64 mg CE/g, respectively. DPPH radical scavenging activity was 4.55~7.86, 3.99~8.79, and 3.74~9.43 mg TE/g, and ABTS radical scavenging activity was 9.32~12.90, 8.64~13.39, and 8.51~14.35 mg TE/g, respectively. Phenol compound of Tawonkong and Socheong cultivars decreased with delay of seeding periods. Radical scavenging activity of Socheong and Jununi cultivars decreased with delay of seeding periods, but Socheong 2 and Socheongja cultivars increased. In the study, phenol compound and radical scavenging activity of small black soybean cultivar were different, depending on cultivars and seeding periods.

Dissimilatory Nitrate Reduction Characteristics of Indigenous Soybean Rhizobia Distributed in Korea Soils (한국에 분포되어 있는 토착대두 근류균의 질산 환원 특성)

  • Choi, Young-Ju;Choi, Yong-Lark;Yun, Han-Dae;Ryu, Jin-Chang;Lee, Sang-Kyu;Cho, Moo-Je
    • Applied Biological Chemistry
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    • v.29 no.2
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    • pp.175-181
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    • 1986
  • Eightyseven strains of indigenous Rhizobia were isolated from the nodule of soybean cultivar, Danyup, cultivated in four different soils sampled from continuously soybean cultivated and newly reclaimed fields. The strains were grouped into Bradyrhizobium japanicum (slow-grower:55 strains) and Rhizobium fredii (fast-grower: 32 strains). The both groups could be divided into two sub-groups according to the denitrification characteristics, that is, denitrifying fast-grower (F-I), nitrate respiring fast-grower (F-II), denitrifying slow-grower (S-I). and nitrate respiring slow-grower (S-II). Among the 87 isolates, F-I, F-II, S-I and S-II sub-groups were 10, 22, 48 and 7 strains, respectively. The one-and two-dimensional polyacrylamide gel electrophoretic pattern of the four sub-groups were compared and discernible difference was observed between fast and slow-grower, but the difference was not discernible between subgroups within the same growth rate group.

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Microstructural Properties of Tropical Legume Seeds (열대지방에서 재배되는 종실의 미세구조에 관한 연구)

  • Kim, Jeong-Kyo;Saio, Kyoko
    • Korean Journal of Food Science and Technology
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    • v.20 no.1
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    • pp.72-78
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    • 1988
  • Microstructures of 18 kinds of legume seeds (15 varieties including 3 strains) which were cultivated in tropical areas, were observed under a light microscope. Majority of legume seeds were composed of starchy cotyledonary cells in which large amounts of single starch granules were contained, while a few had cotyledonary cells filled with a number of protain bodies. Starch granules were different in size and shape depending on varieties. Some contained lipid bodies distributed in cytoplasmic network, and were distinctive in thick cell walls. Microstructure of soybean was also observed for the comparison of the structures.

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Runoff and Soil Losses from Sloping Lands with Different Cropping Practices (경사지의 경종에 따른 유출 및 토양유실에 관한 연구)

  • 김진택;박승우
    • Magazine of the Korean Society of Agricultural Engineers
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    • v.36 no.1
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    • pp.73-82
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    • 1994
  • This paper presents the experimental results of runoff and soil losses from sloping runoff plots under three cropping practices. Twenty-nine runoff plots having slopes of 10, 20, and 30 percent in gradient, and lengths of 10, 20 and 30 meter, respectively, were cultivated with soybean, alfalfa, and fallow conditions during 1989~1990 seasons. Crop stages were grouped based on crop canopy conditions and the cropping management factors of the Univer- sal Soil Loss Equation were derived as ratios of the soil losses to fallow conditions. The results from this study are summarized as follows : 1. Annual rainfall erosivity factor at Ichun station varied from 127 to 1336, averaging 472 and 200 in 1989. The month variations reach the peak in July, being 19& 2. Canopy cover percent for soybean that was taken by a photographic method increased sharply during 30 to 80 days after seeding and the results were used to identify periods for the six crop stages. 3. Annual average runoff rates from soybean and alfalfa plots were 35 and 16 percent of those from fallow ones, respectively. The runoff rates decreased as the crops grew. 4. Soil losses from soybean and alfalfa plots were 14 and 16 percent of those from fallow plots. And the crop coefficients were proposed for different crop stages.

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A fragmentation database of soyasaponins by liquid chromatography with a photodiode array detector and tandem mass spectrometry

  • Son, Haereon;Mukaiyama, Kyosuke;Omizu, Yohei;Tsukamoto, Chigen
    • Analytical Science and Technology
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    • v.34 no.4
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    • pp.172-179
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    • 2021
  • Oleanane-type triterpenoids exist as secondary metabolites in various plants. In particular, soyasaponin, an oleanane-type triterpenoid, is abundant in the hypocotyl of soybean, one of the most widely cultivated crops in the world. Depending on their chemical structure, soyasaponins are categorized as group A saponins or group DDMP (2,3-dihydro-2,5-dihydroxy-6-methyl-4H-pyran-4-one) saponins. The different soyasaponin chemical structures present different health functionalities and taste characteristics. However, conventional phenotype screening of soybean requires a substantial amount of time for functionality of soyasaponins. Therefore, we attempted to use liquid chromatography with a photodiode array detector and tandem mass spectrometry (LC-PDA/MS/MS) for accurately predicting the phenotype and chemical structure of soyasaponins in the hypocotyl of five common soybean natural mutants. In this method, the aglycones (soyasapogenol A [SS-A] and soyasapogenol B [SS-B]) were detected after acid hydrolysis. These results indicated that the base peak and fragmentation differ depending on the chemical structure of soyasaponin with aglycone. Thus, a fragmentation database can help predict the chemical structure of soyasaponins in soyfoods and plants.

Comparison of Soyasapogenol A, B Concentrations in Soybean Seeds and Sprouts

  • Kang, Eun-Young;Kim, Seung-Hyun;Kim, Sun-Lim;Seo, Su-Hyun;Kim, Eun-Hye;Song, Hong-Keun;Ahn, Joung-Kuk;Chung, Ill-Min
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.55 no.2
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    • pp.165-176
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    • 2010
  • Soybean seeds contain many biologically active secondary metabolites, such as proteins, saponins, isoflavones, phytic acids, trypsin inhibitors and phytosterols. Among them, saponins in soybeans have attracted considerable interest because of their health benefits. Soyasaponin A and B are the most abundant types of saponins found in soybeans along with soyasapogenol (aglycone), which is a precursor of soyasaponin. The main purpose of this experiment was to determine the concentration of soyasapogenol in soybean seeds and sprouts as a function of seed size, usage, seed coat color and seed cotyledon color. The 79 Korean soybean varieties were cultivated at Yesan of Chungnam in 2006 for the analysis of soyasapogenol using HPLC with Evaporative Light Scattering Detection (ELSD). The total average concentration of soyasapogenol was $1313.52{\mu}g\;g^{-1}$ in soybean seeds and $1377.22{\mu}g\;g^{-1}$ in soybean sprouts. Soybean sprouts were about 5% higher than soybean seeds in average total soyasapogenol concentration. In the process of sprouting, the average soyasapogenol A content decreased by approximately 1.6%, but soyasapogenol B and total soyasapogenol increased by 8.31% and 4.88%, based on the content of soybean seeds. When classified according to the size of seeds, the total soyasapogenol concentration of soybean seeds were not significantly different (p<0.05) On average, small soybean seeds were increased by as much as $103.14{\mu}g\;g^{-1}$ in sprouting process. As a function of the use of the seeds, The total soyasapogenol in soybean seeds were significantly different (p<0.05). While, the soybean sprouts were not significant different (p<0.05). Altogether, sprout soybean seeds show the greatest change in content during the germination process. When seeds with different coat colors were compared, the total soyasapogenol concentration of soybean with yellow seed coats ($1357.30\mu g\;g^{1}$) was slightly higher than that of soybean with black ($1260.30{\mu}g\;g^{-1}$) or brown ($1263.62{\mu}g\;g^{-1}$) seed coats. For the color of the cotyledon, the total soyasapogenol concentration was significantly increased in green cotyledon during the germination and seedling process. The results of this study suggest the functional characteristics of soybeans through quantitative analysis of soyasapogenol. In addition, the concentration of soyasapogenol exhibited a change during the germination process, which was evaluated by the nutritional value of the soybean sprouts.