• Title/Summary/Keyword: computer topology

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Prediction of Transmembrane Protein Topology Using Position-specific Modeling of Context-dependent Structural Regions

  • Chi, Sang-Mun
    • Journal of the Korean Data and Information Science Society
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    • v.16 no.3
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    • pp.683-693
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    • 2005
  • This paper presents a new transmembrane Protein topology prediction method which is an attempt to model the topological rules governing the topogenesis of transmembrane proteins. Context-dependent structural regions of the transmembrane protein are used as basic modeling units in order to effectively represent their topogenic roles during transmembrane protein assembly. These modeling units are modeled by means of a tied-state hidden Markov model, which can express the position-specific effect of amino acids during ransmembrane protein assembly. The performance of prediction improves with these modeling approaches. In particular, marked improvement of orientation prediction shows the validity of the proposed modeling. The proposed method is available at http://bioroutine.com/TRAPTOP.

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A New Symmetric Cascaded Multilevel Inverter Topology Using Single and Double Source Unit

  • Mohd. Ali, Jagabar Sathik;Kannan, Ramani
    • Journal of Power Electronics
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    • v.15 no.4
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    • pp.951-963
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    • 2015
  • In this paper, a new symmetric multilevel inverter is proposed. A simple structure for the cascaded multilevel inverter topology is also proposed, which produces a high number of levels with the application of few power electronic devices. The symmetric multilevel inverter can generate 2n+1 levels with a reduced number of power switches. The basic unit is composed of a single and double source unit (SDS-unit). The application of this SDS-unit is for reducing the number of power electronic components like insulated gate bipolar transistors, freewheeling diodes, gate driver circuits, dc voltage sources, and blocked voltages by switches. Various new algorithms are recommended to determine the magnitude of dc sources in a cascaded structure. Furthermore, the proposed topology is optimized for different goals. The proposed cascaded structure is compared with other similar topologies. For verifying the performance of the proposed basic symmetric and cascaded structure, results from a computer-based MATLAB/Simulink simulation and from experimental hardware are also discussed.

A Novel Single Converter and Single Inverter (1Con-1Inv) Topology and Control Algorithm for Photovoltaic-Fuel Cell Hybrid System (태양광-연료전지 하이브리드 발전을 위한 새로운 단일 컨버터 및 단일 인버터 (1Con-1Inv) 회로 및 제어 알고리즘)

  • Kim, Jong-Soo;Choe, Gyu-Yeong;Lee, Byoung-Kuk;Won, Chung-Yuen;Lee, Tae-Won
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.58 no.11
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    • pp.2200-2208
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    • 2009
  • This paper presents a novel single converter and single inverter (1Con-1Inv) topology for photovoltaic (PV)-fuel cell (FC) hybrid system and a new control scheme for the PV-FC hybrid system is then proposed. The new topology and the unique algorithm can minimize volume and production cost of the hybrid system. Moreover, system efficiency can improve due to reduction of losses of hardware components and other control factors are well regulated using just 1Con-1Inv with the help of the proposed control algorithm. The validity of proposed algorithm is verified both computer simulation using PSIM and Matlab/Simulink program and experimental with 700W of PV and 600W of FC system.

Effective Comparison of Protein Structures Based on Extended PSAML (확장된 PSAML을 통한 효과적인 단백질 구조 비교)

  • Kim, Jin-Hong;Ahn, Geon-Tae;Lee, Su-Hyun;Lee, Myung-Joon
    • Proceedings of the Korean Society for Bioinformatics Conference
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    • 2003.10a
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    • pp.114-119
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    • 2003
  • 단백질 구조를 비교하는 방법은 단백질 구조를 표현하는 기술에 따라 다양하게 존재한다. 일반적인 단백질 구조 정렬방법은 단백질 구조를 원자 또는 Residue를 기준으로 표현하고, 표현된 두 구조사이의 일치된 부분을 찾는 방법과 단백질 구조를 단백질 이차구조요소로 표현하고 표현된 두 단백질 구조를 정렬하는 방법으로 크게 구분된다. 이러한 단백질 구조 비교 방법은 단백질 구조의 유사성을 측정하는 과정에서 많은 시간을 요구할 뿐만 아니라 PDB에 저장된 데이터가 증가함에 따라 보다 많은 단백질과 비교가 요구된다. 따라서 대용량의 단백질 구조 데이터베이스를 대상으로 효율적으로 단백질의 유사 부분구조를 찾을 수 있는 방법이 필요하다. 본 논문에서는 단백질 구조 비교를 보다 빠르고 효과적으로 수행하기 위하여, 기존의 단백질 이차구조 기반의 구조 표현 방법인 PSAML을 확장하여 단백질 이차구조가 가지는 공간상의 정보를 내포한 Topology String을 생성하고 이를 이용하여 대용량의 단백질구조 데이터베이스에서 유사성이 높은 단백질 구조를 필터링하는 방법에 대하여 기술한다. Topology String은 단백질 이차구조를 하나의 문자로 기술하여 아미노산 순서와 위상학적인(공간적인) 정보를 바탕으로 단백질 구조를 표현하여, 단백질 이차구조를 이용하여 구조 비교를 수행하기 이전에 유사성이 높은 단백질 구조를 신속하게 찾아내는데 효과적으로 적용될 수 있다.

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ISRMC-MAC: Implementable Single-Radio, Multi-Channel MAC Protocol for WBANs

  • Cho, Kunryun;Jeon, Seokhee;Cho, Jinsung;Lee, Ben
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.10 no.3
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    • pp.1052-1070
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    • 2016
  • Wireless Body Area Networks (WBANs) have received a lot of attention as a promising technology for medical and healthcare applications. A WBAN should guarantee energy efficiency, data reliability, and low data latency because it uses tiny sensors that have limited energy and deals with medical data that needs to be timely and correctly transferred. To satisfy this requirement, many multi-radio multi-channel MAC protocols have been proposed, but these cannot be implemented on current off-the-shelf sensor nodes because they do not support multi-radio transceivers. Thus, recently single-radio multi-channel MAC protocols have been proposed; however, these methods are energy inefficient due to data duplication. This paper proposes a TDMA-based single-radio, multi-channel MAC protocol that uses the Unbalanced Star+Mesh topology to satisfy the requirements of WBANs. Our analytical analysis together experiments using real sensor nodes show that the proposed protocol outperforms existing methods in terms of energy efficiency, reliability, and low data latency.

Loadbalancing for WDM Network using Dynamic Watermarks (WDM 네트워크에서 동적 워터마크 결정을 이용한 로드벨런싱)

  • Nahm, Jung-Joo;Kim, Sung-Chun
    • Journal of the Institute of Electronics Engineers of Korea TC
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    • v.44 no.2
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    • pp.1-5
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    • 2007
  • Wavelength-division multiplexed (WDM) networks are emerging to be the right choice for the future transport networks. In WDM networks, the optical layer provides circuit-switched lightpath services to the client layer such as IP, SONET and ATM. The set of lightpaths in the optical layer defines the virtual topology. Since the optical switches are reconfigurable, the virtual topology can be reconfigured in accordance with the changing traffic demand pattern at theclient layer in order to optimize the network performance. We present a new approach to the virtual topology reconfiguration and loadbalancing problem for wavelength-routed, optical wide-area networks under dynamic traffic demand. By utilizing the measured Internet backbone traffic characteristics, our approach follows the changes in traffic without assuming that the future traffic pattern is known. For the simulation traffic modeling, we collected the data from real backbone traffic. Experiments show that the standard deviation compared to previous technique is reduced.

Multiobjective Genetic Algorithm for Design of an Bicriteria Network Topology (이중구속 통신망 설계를 위한 다목적 유전 알고리즘)

  • Kim, Dong-Il;Kwon, Key-Ho
    • Journal of the Institute of Electronics Engineers of Korea CI
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    • v.39 no.4
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    • pp.10-18
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    • 2002
  • Network topology design is a multiobjective problem with various design components. The components such as cost, message delay and reliability are important to gain the best performance. Recently, Genetic Algorithms(GAs) have been widely used as an optimization method for real-world problems such as combinatorial optimization, network topology design, and so on. This paper proposed a method of Multi-objective GA for Design of the network topology which is to minimize connection cost and message delay time. A common difficulty in multiobjective optimization is the existence of an objective conflict. We used the prufer number and cluster string for encoding, parato elimination method and niche-formation method for the fitness sharing method, and reformation elitism for the prevention of pre-convergence. From the simulation, the proposed method shows that the better candidates of network architecture can be found.

Time Domain Response of Random Electromagnetic Signals for Electromagnetic Topology Analysis Technique

  • Han, Jung-hoon
    • Journal of the Korea Society of Computer and Information
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    • v.27 no.2
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    • pp.135-144
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    • 2022
  • Electromagnetic topology (EMT) technique is a method to analyze each component of the electromagnetic propagation environment and combine them in the form of a network in order to effectively model the complex propagation environment. In a typical commercial communication channel model, since the propagation environment is complex and difficult to predict, a probabilistic propagation channel model that utilizes an average solution, although with low accuracy, is used. However, modeling techniques using EMT technique are considered for application of propagation and coupling analysis of threat electromagnetic waves such as electromagnetic pulses, radio wave models used in electronic warfare, local communication channel models used in 5G and 6G communications that require relatively high accuracy electromagnetic wave propagation characteristics. This paper describes the effective implementation method, algorithm, and program implementation of the electromagnetic topology (EMT) method analyzed in the frequency domain. Also, a method of deriving a response in the time domain to an arbitrary applied signal source with respect to the EMT analysis result in the frequency domain will be discussed.

A Survey on Key Management Strategies for Different Applications of Wireless Sensor Networks

  • Raazi, Syed Muhammad Khaliq-Ur-Rahman;Lee, Sung-Young
    • Journal of Computing Science and Engineering
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    • v.4 no.1
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    • pp.23-51
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    • 2010
  • Wireless Sensor Networks (WSN) have proved to be useful in applications that involve monitoring of real-time data. There is a wide variety of monitoring applications that can employ Wireless Sensor Network. Characteristics of a WSN, such as topology and scale, depend upon the application, for which it is employed. Security requirements in WSN vary according to the application dependent network characteristics and the characteristics of an application itself. Key management is the most important aspect of security as some other security modules depend on it. We discuss application dependent variations in WSN, corresponding changes in the security requirements of WSN and the applicability of existing key management solutions in each scenario.

A Novel Extended Topology for Cascade Multilevel Voltage Source Converter for High-Power Applications with Interesting Advantages

  • Alishah, Rasoul Shalchi;Nazarpour, Daryoosh;Hosseini, Seyed Hossein;Sabahi, Mehran
    • Journal of international Conference on Electrical Machines and Systems
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    • v.3 no.3
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    • pp.298-304
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    • 2014
  • In this paper, a novel topology for cascade multilevel converter is introduced, which has many levels with fewer number of power electronic components. Less number of the switches leads to the reduction of size, losses, simple control strategy and high efficiency. For proposed multilevel converter, a new algorithm for determination of dc voltage source values has been recommended. The performance and operation of the proposed multilevel converter has been evaluated with the simulation results of a cascade 25-level converter.