• The Korean Journal of Ecology
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• 제18권4호
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• pp.471-481
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• 1995

The weed population dynamics as affected by contrasting conventional tillege (CT) and no-tillage (NT) practices with a minimum herbicide application was studied in Athens, Georgia, U.S.A. Common chickweed (Stellaria media) was the most common spring weed while johnsongrass (Sorghum halepense), sicklepod (Cassia obtusifolia), and pigweed (Amaranthus retroflexus) accounted for 89∼97％ of net production during summers of 1983 and 1984. Total weed production in summer of 1984 was 2∼5 times greater than that of 1983. Weed production was greater in NT plots than in CT plots in summer of 1983, but reverse was the case in summer of 1984. In spring, net production in NT plots was greater than that in CT plots, especially, in 1985. Species diversity was consistently higher in NT plots, but in the wet summer of 1984 the pattern was different, with higher diversity in CT plots. Weed species diversity was higher in the spring rye crop than in the summer grain sorghum crop. The larger but less diverse weed populations in summer of 1984 indicated that these populations experienced competitive exclusion. Under the favorable summer moisture conditions the three dominant species grew so vigorously and quickly as to exclude many less common species that were able to survive under the drier conditions in 1983. The three dominant species not only excluded other weeds in 1984 but also greatly reduced crop production. The perennial johnsongrass was equally successful, or even more so, in CT plots as in NT plots. Plowing did not kill johnsongrass rhizomes but tended to break them up, thus increasing the number of individual plants that appear after the plowing. It means that johnsongrass was not controlled by the plowing. In summer of 1983, a moderate amount of weedy growth was maintained with a minimum amount of gerbicide application in NT and CT plots. It is possible that a small mixed weed population would be beneficial by providing cover for predatory and parasitic arthropods, and by reducing soil temperature and moisture losses.

• 대한의생명과학회지
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• 제25권1호
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• pp.40-53
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• 2019

Of the Acinetobacter spp., A. baumannii (genospecies 2) is the most clinically significant in terms of hospital-acquired infections worldwide. It is difficult to perform Acinetobacter-related taxonomy using phenotypic characteristics and routine laboratory methods owing to clusters of closely related species. The ability to accurately identify Acinetobacter spp. is clinically important because antimicrobial susceptibility and clinical relevance differs significantly among the different genospecies. Based on the medical importance of pathogenic Acinetobacter spp., the distribution and characterization of Acinetobacter spp. isolates from 123 clinical samples was determined in the current study using four typically applied bacterial identification methods; partial rpoB gene sequencing, amplified rRNA gene restriction analysis (ARDRA) of the intergenic transcribed spacer (ITS) region of the 16~23S rRNA, the $VITEK^{(R)}$ 2 system (an automated microbial identification system) and matrix-assisted laser desorption/ionization-time of flight mass spectrometry (MALDI-TOF MS). A. baumannii isolates (74.8%, 92/123) were the most common species, A. nosocomialis (10.6%, 13/123) and A. pittii isolates (7.5%, 9/123) were second and third most common strains of the A. calcoaceticus-A. baumannii (ACB) complex, respectively. A. soli (5.0%, 6/123) was the most common species of the non-ACB complex. RpoB gene sequencing and ARDRA of the ITS region were demonstrated to lead to more accurate species identification than the other methods of analysis used in this study. These results suggest that the use of rpoB genotyping and ARDRA of the ITS region is useful for the species-level identification of Acinetobacter isolates.

• Pediatric Gastroenterology, Hepatology & Nutrition
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• 제25권1호
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• pp.41-51
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• 2022

Purpose: Community-acquired bacterial enteritis (CABE) is a common problem in developed countries. It is important to understand the epidemiologic changes in bacterial pathogens for prevention and treatment. Therefore, we studied the epidemiologic changes in CABE in Korean children. Methods: A total of 197 hospitalized pediatric patients aged <19 years that presented with dysentery symptoms and showed positive polymerase chain reaction results for bacterial species in stool samples, were enrolled in this study for 10 years (June 2010 to June 2020). We classified patients in phase I (06, 2010-06, 2015) and phase II (07, 2015-06, 2020) and analyzed their epidemiologic and clinical characteristics. Results: The most common pathogens were Campylobacter species (42.6%) and Salmonella species were the second most common pathogens (23.9%). The abundance of pathogens decreased in the following order: Clostridium difficile (9.6%), Shigella (5.6%), and Clostridium perfringens (5.6%). Escherichia coli O157:H7 was found to be the rarest pathogen (2.0%). Campylobacter species showed an increase in the infection rate from 32.1% in phase I to 49.6% in phase II (p=0.0011). Shigella species showed a decline in the infection rate in phase I from 14.1% to 0.0% in phase II (p<0.001). C. difficile and C. perfringens showed an increase in infection rate in phase II compared to phase I, but the difference was not statistically significant. Conclusion: The infection rate of Campylobacter species in CABE has been rising more recently, reaching almost 50%. This study may help establish policies for prevention and treatment of CABE in Korean children.

• 아시안잔디학회지
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• 제7권2_3호
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• pp.113-120
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• 1993

Dictyostelid cellular slime molds were quantitatibly isolated from Korean lawngrass turf in Seoul National University, Korea, by the 'Clonal Isolation Technique(Cavender and Raper, 1965a)'. Total six species were found. These are Dictyostelium sphaerocephalum. D. purpuream. D. flavidam, D. crassica ale, Polysphondilium pallidum. P. violaceum. D. sphaerocephalum was the dominant species and P. violaceum, D. flaviidum, D. crassicaule were rare. Compared with other region, species diversity and species richness of Korean lawngrass turf appeared to he low. The dominant species, however, is not very common in other plant communities, so it cnay he characteristic of Korean lawngrass turf.

• 한국균학회소식:학술대회논문집
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• 한국균학회 2016년도 춘계학술대회 및 임시총회
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• pp.11-11
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• 2016

Penicillium species are commonly isolated from various outdoor and indoor environments, including marine environments such as sponges, algae and sand. Penicillium is especially important because numerous bioactive compounds have been isolated. Penicillium was the most common species in intertidal zone in Korea, however the diversity and ecological roles of Penicillium in intertidal zone are not clarified. We explored diversity and ecological roles of marine-derived Penicillium from tidal flat and sea sand in Korea. The diversity of marine-derived Penicillium from Korea was investigated using both culture-dependent and culture-independent approach by ${\beta}$-tubulin sequence. In addition, we evaluated optimal temperature, halo-tolerance, and enzyme activity of Penicillium strains, such as extracellular alginase, endoglucanase, ${\beta}$-glucosidase, and protease. For culture-dependent approach, a total of 182 strains of 62 Penicillium species were isolated, with 53 species being identified. The most common species was Penicillium oxalicum, followed by P. crustosum, P. brasilianum, P. koreense, and P. griseofulvum. Species richness and composition were not significantly different by season, substrates, and seaside. For culture-independent approach using Illumina sequencing, 73 OTUSs were detected. The most frequently observed species was P. antarcticum, followed by P. koreense, P. crustosum, and P. brevicompactum. Diversity of Penicillium was higher during winter season than during summer season and in western sea than in southern sea, respectively. Community structure was significantly different by season and sea side. 52 species were detected by both methods. Unique species were isolated from each of methods - 10 from culture methods and 21 from Illumina sequencing. Furthermore, salinity adaption of the Penicillium varied depending on species. Many Penicillium species showed endoglucanase, ${\beta}$-glucosidase, and protease activity. Some species including P. paneum and P. javanicum degraded the polycyclic aromatic hydrocarbons. Thus, our results demonstrate that intertidal zone in Korea harbors diverse Penicillium community and marine-derived Penicillium play important ecological roles as decomposers of organic material in marine environments.

• ALGAE
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• 제37권2호
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• pp.123-133
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• 2022

Genetic diversity and distribution patterns of marine macroalgae are increasingly being documented in Southeast Asia. These studies show that there can be significant levels of genetic diversity and isolation between populations on either side of the Thai-Malay Peninsula. Bostrychia tenellla is a common filamentous red seaweed in the region and the entity is represented by at least two cryptic species. Despite being highly diverse and widespread, genetic variation and population structure of this species complex remains understudied, especially around the Thai-Malay Peninsula. We analyzed genetic diversity and inferred the phylogeographic pattern of specimens identified as B. tenella using the plastid RuBisCo spacer from samples from the Andaman Sea and the Gulf of Thailand. Our genetic analysis confirmed the occurrence of the two cryptic B. tenella species (B and C) along both coasts. Cryptic species B was more common in the area and displayed higher genetic diversity than species C. Historical demographic analyses indicated a stable population for species B, but more recent population expansion for species C. Our analyses also revealed that both cryptic species from the Andaman Sea possessed higher genetic diversity than those of the Gulf of Thailand. We also detected moderate to high levels of gene flow and weak phylogeographic structure of cryptic species B between the two coasts. In contrast, phylogeographic analysis showed genetic differences between populations of both cryptic species within the Andaman Sea. Overall, these results suggest that cryptic B. tenella species around Thai-Malay Peninsula may have undergone different demography histories, and their patterns of genetic diversity and phylogeography were likely caused by geological history and regional sea surface current circulation in the area.

• Asian-Australasian Journal of Animal Sciences
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• 제26권3호
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• pp.366-377
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• 2013

We examined the nutritive value of common grass species in the semi-arid rangelands of Borana in southern Ethiopia using local experience based herbage preference (LEBHP) perception and laboratory techniques. Local pastoralists in the study area were asked to identify common grass species and rank them according to the species' preferences and palatability to cattle. The pastoralists listed a total of 15 common grass species which were then sampled during the main rain and cold dry seasons and analyzed for crude protein (CP), Neutral Detergent Fiber (NDF), Acid Detergent Fiber (ADF) and ash content to verify pastoralists' claim regarding the quality of individual species. The relative feed value (RFV) and dry matter digestibility (DMD) were also calculated using NDF and ADF contents. Spearman's rank correlation was used to examine possible relationships between laboratory results and pastoralists' experience on grass quality. Cenchrus ciliaris, Chrysopogon aucheri, Digitaria milanjiana, Eragrostis papposa and Panicum maximum were the top five species based on LEBHP perception. There were indications of inconsistency in terms of LEBHP perception among the different pastoral communities. The chemical composition of all grass species showed significant (p<0.05) variation between sites, seasons and species. The results showed that the CP values for the Borana rangelands were in the range of 8.7% in the main rain season to 5.1% for the cold dry season. The fiber constituents were relatively low in the main rain season compared to the cold dry season. Overall, Digitaria milanjiana had the highest CP (16.5%) content, while the least was recorded with Heteropogon contortus (10.8) and Aristida adoensis (9.8%) during the main rain season. It seems that the spatial variability of landscapes within the wider geographical regions, soil properties and texture, and land-use patterns probably contributed to site differences in species quality. Generally, the RFV of individual grass species was significantly (p<0.05) varied between and within sites. The ranking of species by pastoralists according to their preferences by cattle was highly correlated with the chemical composition of laboratory results of individual grass species with 'r' values for CP (0.94), ash (0.95), NDF (-0.98), ADF (-0.93) and ADL (-0.93). We suggest the complimentary use of LEBHP and laboratory techniques in evaluating the nutritive quality of rangeland forage species for sustainable animal production.

• Journal of Species Research
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• 제9권3호
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• pp.233-246
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• 2020

A scientific name is one of changeable terms in biology whenever additional research results of specific taxa is accumulated. The Database of the National Species List of Korea (DBNKo) was developed to manage taxonomic information of Korean species, designed to describe the changeable and complex taxonomical structure and information. A Korean Taxonomical Serial Number (KTSN) was assigned to each taxon, different from the normally used systems that the scientific name was considered as primary key to manage higher rank of taxa systematically. Common names were also treated with the KTSN, reflecting that common name is considered as one type of taxon. Additional taxonomic information (e.g., synonyms, original names, and references) was also added to the database. A web interface with an intuitive dashboard presenting taxonomic hierarchical structure is provided to experts and/or managers of the DBNKo. Currently, several biological databases are available in the National Institute of Biological Resources (NIBR) such as a specimen database, a digital library, a genetic information system, and the shared species data based on the DBNKo. The DBNKo started sharing species information with other institutions such as the Nakdonggang National Institute of Biological Resources. It is an ideal centralized species database to manage standardized information of Korean species.

• Journal of Ecology and Environment
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• 제43권2호
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• pp.212-218
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• 2019

Background: Allelopathy has been suggested as one potential mechanism facilitating the successful colonisation and expansion of invasive plants. The impacts of the ongoing elevation in atmospheric carbon dioxide (CO₂) on the production of allelochemicals by invasive species are of great importance because they play a potential role in promoting biological invasion at the global scale. Common ragweed (Ambrosia artemisiifolia var. elatior), one of the most notorious invasive exotic plant species, was used to assess changes in foliar mono- and sesquiterpene production in response to CO₂ elevation (389.12 ± 2.55 vs. 802.08 ± 2.69 ppm). Results: The plant growth of common ragweed significantly increased in elevated CO₂. The major monoterpenes in the essential oil extracted from common ragweed leaves were β-myrcene, DL-limonene and 1,3,6-octatriene, and the major sesquiterpenes were β-caryophyllene and germacrene-D. The concentrations of 1,3,6-octatriene (258%) and β-caryophyllene (421%) significantly increased with CO₂ elevation. Conclusions: These findings improve our understanding of how allelochemicals in common ragweed respond to CO₂ elevation.

• 한국습지학회지
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• 제21권3호
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• pp.199-206
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• 2019

계단식 묵논습지의 식생 특성을 이해하기 위하여, 계단식 묵논습지의 식물종 구성 및 종풍부도 양상을 대상으로 자연습지 및 인공습지와의 비교연구를 수행하였다. 달뿌리풀은 자연습지(10.8%)나 인공습지(10.8%)에 비해 계단식 묵논습지(23.9%)에서 상대적으로 자주 관찰된 반면, 갈대는 계단식 묵논습지(18.3%) 보다는 자연습지(43.1%)나 인공습지(35.4%)에서 보다 높은 비율로 출현하였다. 부들의 경우 계단식 묵논습지(19.7%)에서만 높은 비율로 출현한 반면, 애기부들의 경우 자연습지(21.5%)와 인공습지(32.3%)에서 상대적으로 높은 비율을 보였다. 그와 더불어, 나도겨풀, 미나리, 그리고 개발나물과 같은 몇몇 습지 의존성 식물들의 경우 오직 계단식 묵논습지에서만 관찰되었다. 특히, 계단식 묵논습지($6.3{\pm}2.2$ 종/$m^2$)는 자연습지($4.9{\pm}1.8$ 종/$m^2$) 및 인공습지($3.9{\pm}1.3$ 종/$m^2$)에 비해 상대적으로 높은 수준의 식물 종풍부도를 나타내었다. 즉, 계단식 묵논습지는 특유의 식생 특성을 나타내었을 뿐만 아니라 종풍부도 차원에서 보다 높은 수준의 생태적 가치를 보인 것이다. 비오톱으로서 계단식 묵논습지가 갖는 높은 생태적 가치에 대한 계속적인 관심과 더불어, 이를 유지관리하고 보전하기 위한 차원에서의 지속적인 노력이 필요할 것이다.