• Title/Summary/Keyword: coding sequences

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A Simple Transcoding Method for H.264 Coding System (H.264 부호화시스템에서 간단한 비트열 변환 기법)

  • Yang, Young-Hyun;Kwon, Soon-Kak
    • Journal of Korea Multimedia Society
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    • v.9 no.7
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    • pp.818-826
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    • 2006
  • In this paper, we investigate the relationship of bitrate and quantization parameter needed for the trans-coding method that makes the H.264 bitstream of a particular bitrate to the other titrate. Also we propose the new method in order to transcode the titrate between H.264 video coded bitstreams. The proposed transcoding method updates the model parameters from previous picture or slice by using the approximated relationship of bitrate and quantization step-size and finds the target quantization step-size, and then generates the target titrate by simple coding processing just after requantization. Therefore, the proposed method does not need the complex bitrate control and converts to the target titrate by simple implementation. From simulation, we can see that the proposed method transcodes exactly to an assigned target bitrate for the four test sequences with different their characteristics.

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Multi-View Wyner-Ziv Video Coding Based on Spatio-temporal Adaptive Estimation (시공간 적응적인 예측에 기초한 다시점 위너-지브 비디오 부호화 기법)

  • Lee, Beom-yong;Kim, Jin-soo
    • The Journal of the Korea Contents Association
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    • v.16 no.6
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    • pp.9-18
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    • 2016
  • This paper proposes a multi-view Wyner-Ziv Video coding scheme based on spatio-temporal adaptive estimation. The proposed algorithm is designed to search for a better estimated block with joint bi-directional motion estimation by introducing weights between temporal and spatial directions, and by classifying effectively the region of interest blocks, which is based on the edge detection and the synthesis, and by selecting the reference estimation block from the effective motion vector analysis. The proposed algorithm exploits the information of a single frame viewpoint and adjacent frame viewpoints, simultaneously and then generates adaptively side information in a variety of closure, and reflection regions to have a better performance. Through several simulations with multi-view video sequences, it is shown that the proposed algorithm performs visual quality improvement as well as bit-rate reduction, compared to the conventional methods.

A Wavelet-Based Watermarking Scheme of Digital Image Using ROI Method (ROI를 이용한 웨이브렛 기반 디지털 영상의 워터마킹 기법)

  • Kim, Tae-Jung;Hong, Choong-Seon;Sung, Ji-Hyun;Hwang, Jae-Ho;Lee, Dae-Young
    • The KIPS Transactions:PartB
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    • v.11B no.3
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    • pp.289-296
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    • 2004
  • General watermarking techniques tend not to consider intrinsic characteristics of image, so that watermarks are embeded to entire images. In this paper, we present a watermarking algorithm based on wavelet domain, and the watermark is embedded into large coefficients in region of interest(ROI) being based on principle of multi-threshold watermark coding(MTWC) for robust watermark insertion. We try to accomplish both image duality and robustness using human visual system(HVS). The watermarks are embedded in middle frequency bands because the distortion degree of watermarked images appears to be less than lower frequency bands, and the embedded watermarks in the middle bands showed high extraction ratios after some distortion. The watermarks are consisted of pseudo random sequences and detected using Cox's similarity mesurement.

An Adaptive Filtering Method for Enhancement of Inter-color Plane Estimation in HEVC RExt RGB Images (HEVC RExt RGB 영상의 색평면 간 예측 향상을 위한 적응적 필터링 기법)

  • Choi, Jangwon;Choe, Yoonsik
    • Journal of Broadcast Engineering
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    • v.18 no.4
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    • pp.647-650
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    • 2013
  • HEVC RExt(High Efficiency Video Coding Range Extension) set a goal to support RGB/YUV 4:2:2 4:4:4 color sampling and over 10 bit-depth images. Unlike the previous 4:2:0 color sampling images, RGB images have the high correlation in inter-color planes. Using this characteristic, some methods which are contributed in JCT-VC standardization meetings estimate the pixel values of inter-color plane. But when we use the estimation of inter-color plane in RGB images, high frequency components of RGB images are caused to reduce the coding efficiency because they usually have the low inter-color plane correlation. Therefore, in this paper, we propose an adaptive low pass filtering method in the inter-color plane estimation. Using this method, we can improve the estimation efficiency of inter-color plane in RGB images. The experimental results with HEVC RExt RGB test sequences show that the proposed method has 0.6% BD(Bjontegaard Distortion)-rate gain and some increased complexity compared to the previous inter-color plane estimation method.

Construction and Expression of Mutant cDNAs Responsible for Genetic Polymorphism in Aldehyde Oxidase in Donryu Strain Rats

  • Adachi, Mayuko;Itoh, Kunio;Masubuchi, Akiko;Watanabe, Nobuaki;Tanaka, Yorihisa
    • BMB Reports
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    • v.40 no.6
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    • pp.1021-1027
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    • 2007
  • We demonstrated the genetic polymorphism of aldehyde oxidase (AO) in Donryu strain rats: the ultrarapid metabolizer (UM) with nucleotide mutation of (377G, 2604C) coding for amino acid substitution of (110Gly, 852Val), extensive metabolizer (EM) with (377G/A, 2604C/T) coding for (110Gly/Ser, 852Val/Ala), and poor metabolizer (PM) with (377A, 2604T) coding for (110Ser, 852Ala), respectively. The results suggested that 377G > A and/or 2604C > T should be responsible for the genetic polymorphism. In this study, we constructed an E. coli expression system of four types of AO cDNA including Mut-1 with (377G, 2604T) and Mut-2 with (377A, 2604C) as well as naturally existing nucleotide sequences of UM and PM in order to clarify which one is responsible for the polymorphism. Mut-1 and Mut-2 showed almost the same high and low activity as that of the UM and PM groups, respectively. Thus, the expression study of mutant AO cDNA directly revealed that the nucleotide substitution of 377G > A, but not that of 2604C > T, will play a critical role in the genetic polymorphism of AO in Donryu strain rats. The reason amino acid substitution will cause genetic polymorphism in AO activity was discussed.

Performance Analysis of Scalable Video Coding between T-DMB and Advanced T-DMB on Bandwidth Allocation Method (대역폭 할당 방식에 따른 T-DMB와 AT-DMB간의 스케일러블 부호화 성능 분석)

  • Choi, Sung-Jin;Kim, Jin-Soo;Kim, Jae-Gon;Choi, Hae-Chul;Yoo, Jeong-Joo
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2007.10a
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    • pp.113-116
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    • 2007
  • T-DMB (Terrestrial-DMB) service is now available in the metropolitan area, but due to the bandwidth limitation, it is allowed to provide up to CIF resolution. As users' requests for high-quality mobile multimedia services are rapidly increasing and additional bandwidth can be provided by adopting the hierarchical modulation transmission technology, the research on the Advanced Terrestrial-DMB(AT-DMB) service using the SVC(Scalable Video Coding) scheme is being actively studied. In this paper, through computer simulations, first, while keeping the current T-DMB service unchanged, the visual qualities of AT-DMB services are investigated by varying the additional bandwidth. Then, by considering the cases that the overall bandwidth can be allowed to dynamically allocate to the T-DMB/AT-DMB video services, the performance characteristics between two layers are compared over the different kinds of video sequences.

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Comparative Genomics of T-complex protein 10 like in Humans and Chimpanzees

  • Kim, Il-Chul;Kim, Dae-Soo;Kim, Dae-Won;Choi, Sang-Haeng;Choi, Han-Ho;Chae, Sung-Hwa;Park, Hong-Seog
    • Genomics & Informatics
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    • v.3 no.2
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    • pp.61-65
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    • 2005
  • Comparing 231 genes on chimpanzee chromosome 22 with their orthologous on human chromosome 21, we have found that 15 orthologs have indels within their coding sequences. It was rather surprising that significant number of genes have changed by indel, despite the shorter time since their divergence and led us hypothesize that indels and structural changes may represent one of the major mechanism of proteome evolution in the higher primates. Human T-complex protein 10 like (TCP 10L) is a representative having indel within its coding sequence. Gene structure of human TCP10L compared with chimpanzee TCP10L gene showed 16 base pair difference in genomic DNA. As a result of the indel, frame shift mutation occurs in coding sequence (CDS) and human TCP10L express longer polypeptide of 21 amino acid residues than that of chimpanzee. Our prediction found that the indel may affect to dramatic change of secondary protein structure between human and chimpanzee TCP10L. Especially, the structural changes in the C-terminal region of TCP10L protein may affect on the interacting potential to other proteins rather than DNA binding function of the protein. Through these changes, TCP10L might influence gene expression profiles in liver and testis and subsequently influence the physiological changes required in primate evolution.

Expression and DNA Sequence of the Gene Coding for the lux-specific Fatty Acyl-CoA Reductase from photobacterium phosphoreum

  • Lee, Chan-Yong;Edward A. Meighen
    • Journal of Microbiology
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    • v.38 no.2
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    • pp.80-87
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    • 2000
  • The nucleotide sequence of the luxC gene coding for lux-specific fatty acyl-CoA reductase and the upstream DNA (325bp)of the structural gene from bioluminescent bacterium, Photobacterium phosphoreum, has been deternubed. An open reading frame extending for more than 20 codons in 325 bp DNA upstream of luxC was not present in both directions. The lux gene can be translated into a polypeptide of 54 kDa and the amino acid sequences of lux specific reductases of P. phosphoreum shares 80, 65, 58, and 62% identity with those of the Photobacterium leiognathi, Vibrio fischeri, Vibrio harveyi, and Xehnorhabdus luminescenens reductases, respectively. Analyses of codon usage, showing that a high frequency (2.3%) of the isoleucine codon, AUA, in the luxC gene compared to that found in Escherichia coli genes (0.2%) and its absence in the luxA and B genes, suggested that the AUA codon may play a modulator role in the expression of lux gene in E. coli. The structural genes (luxC, D, A, B, E) of the P. phosphoreum coding for luciferase (${\alpha}$,${\beta}$) and fatty acid reductase (r, s, t) polypeptides can be expressed exclusively in E. coli under the T7 phage RNA polymerase/promoter system and identificationof the [35S]methionine labelled polypeptide products. The degree of expression of lux genes in analyses of codon usage. High expression of the luxC gene could only be accomplished in a mutant E. coli 43R. Even in crude extracts, the acylated acyl-CoA reductase intermediate as well as acyl-CoA reductrase activities could be readily detected.

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Complete Mitochondrial Genome of Mythimna loreyi (Duponchel, 1827) (Lepidoptera: Noctuidae) in South Korea (국내 뒷흰가는줄무늬밤나방의 미토콘드리아 게놈(mitochondrial genome) 분석)

  • Na Ra Jeong;Dagyeong Jeong;Gwan-Seok Lee;Wonhoon Lee
    • Korean journal of applied entomology
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    • v.62 no.4
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    • pp.347-354
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    • 2023
  • Mythimna loreyi (Duponchel, 1827) (Lepidoptera: Noctuidae) is a pest that damages agricultural plants, such as rice, wheat, and maize. We sequenced the entire 15,314-bp mitochondrial genome of this species. It has a typical set of genes (13 protein-coding genes, two ribosomal RNA genes, and 22 transfer RNA genes) as well as one major non-coding A+T-rich region. Using concatenated sequences of 13 protein-coding genes and two rRNAs (13,376 bp, including gaps), phylogenetic analysis demonstrated that the sister relationship between M. loreyi and M. separata had the highest nodal support. The monophyly of each family (Noctuidae, Euteliidae, Nolidae, Erebidae, and Notodontidae) of the superfamily Noctuoidea was supported by the highest nodal support.

Molecular Identification of Gyrodinium impudicum and Gymnodinium sanguineum by Comparing the Sequences of the Internal Transcribed Spacers 1, 2 and 5.8S Ribosomal DNA

  • Kim Gi Young;Ha Myoung-Gyu;Cho Eun Seob;Lee Tae-Ho;Lee Sang Jun;Lee Jae-Dong
    • Fisheries and Aquatic Sciences
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    • v.2 no.1
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    • pp.66-77
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    • 1999
  • The sequences coding for the 5.8S rDNA and the internal transcribed spacers (ITS1 and ITS 2) from the isolates of nine isolates of Gyrodinium impudicum and two isolates of Gymnodinium sanguineum species were amplified, sequenced and compared with the previously known Alexandrium species and Gymnodinium catenatum. The genetic distance analyses based on the sequence alignment indicated that Gymnodinium catenatum and Gyrodinium impudicum species were some related, Alexandrium species was distant. G. catenatum and G. sanguineum were quite separate, but these two species belonged to the same genus. G. impudicum and G. catenatum forming the closet cluster showed some variation in the alignment of ITS regions. The length of ITS1 varied more than that of ITS2 and the length of ITS1 and ITS2 was different for each G. impudicum, Gymnodinium and Alexandrium species. Also, the length of ITS1 was shorter than that of ITS2. However, on the sequences of G. sanguineum, the length of ITS1 was longer about 23 nucleotides than that of ITS2. The phylogenetic analysis and rDNA similarity of G. impudicum and G. catenatum $(59\%)$ is higher than the that of G. catenatum and G. sanguineum $(55\%)$. It was thought that the phylogenetic analysis and the genetic distance revealed that G. impudicum and G. catenatum were clearly different species and G. impudicum may belong to the genus of Gymnodinium.

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