• Title/Summary/Keyword: cleavage.

Search Result 2,074, Processing Time 0.024 seconds

Synthesis of Protoberberine Related Compounds and Their Antifungal Activities (프로토베르베린 관련 화합물합성 및 항균작용)

  • Kim, Sin-Kyu;Kim, Dong-Hyun;Chung, Kyung-Hee;Hwang, Soon-Ho;Kim, Jae-Hyun
    • YAKHAK HOEJI
    • /
    • v.38 no.1
    • /
    • pp.91-96
    • /
    • 1994
  • Irradiation of the berberinephenolbetaine [1] effected valence tautamerization to five 8,14-cycloberbine[21, which was converted to the spirobenzylisoquinolines by regioselective C-N bond cleavage A variety of ring systems such as compounds [4], [5] and [6] were introduced by the structural modification of berberinephenolbetaine.

  • PDF

S. setonii 유래 고온성 catechol-1,2-dioxgenase 특성연구

  • Park, Hyeon-Ju;Lee, Bok-Nam;An, Hye-Ryeon;Kim, Eung-Su
    • 한국생물공학회:학술대회논문집
    • /
    • 2000.04a
    • /
    • pp.434-437
    • /
    • 2000
  • Streptomyces setonii(ATCC 39116) is a thermophilic gram-positive soil bacteria which undergoes an ortho-cleavage pathway in the presence of phenol or benzoate as a sole carbon and energy source. The specific activities of catechol-1,2-dioxygenase in S. setonii, a key enzyme in ortho-cleavage pathway, were induced by various aromatic compounds such as benzoate, phenol, m-hy-benzoate, p-hy-benzoate, catechol, o-cresol, m-cresol, p-cresol, benzene, toluene, ethyl-benzene, 2-chloro-phenol, and 4-chloro-phenol, among which the phenol showed the highest inducibility in the presence of 0.01% glucose. More than 0.1% glucose dramatically reduced the specific activities of catechol-1,2-dioxygenase induced by most of the single aromatic compounds tested.

  • PDF

Single-molecule fluorescence measurements reveal the reaction mechanisms of the core-RISC, composed of human Argonaute 2 and a guide RNA

  • Jo, Myung Hyun;Song, Ji-Joon;Hohng, Sungchul
    • BMB Reports
    • /
    • v.48 no.12
    • /
    • pp.643-644
    • /
    • 2015
  • In eukaryotes, small RNAs play important roles in both gene regulation and resistance to viral infection. Argonaute proteins have been identified as a key component of the effector complexes of various RNA-silencing pathways, but the mechanistic roles of Argonaute proteins in these pathways are not clearly understood. To address this question, we performed single-molecule fluorescence experiments using an RNA-induced silencing complex (core-RISC) composed of a small RNA and human Argonaute 2. We found that target binding of core-RISC starts at the seed region of the guide RNA. After target binding, four distinct reactions followed: target cleavage, transient binding, stable binding, and Argonaute unloading. Target cleavage required extensive sequence complementarity and accelerated core-RISC dissociation for recycling. In contrast, the stable binding of core-RISC to target RNAs required seed-match only, suggesting a potential explanation for the seed-match rule of microRNA (miRNA) target selection.

Effect of $\alpha$-Tocopherol and Cysteamine on Maturation Male Pronuclear Formation and Development of Porcine Oocytes In Vitro ($\alpha$-Tocopherol과 Cysteamine 첨가가 돼지 미성숙난포란의 체외성숙, 체외수정 및 배발달에 미치는 영향)

  • 이경호;문승주;김재홍
    • Journal of Embryo Transfer
    • /
    • v.14 no.1
    • /
    • pp.9-15
    • /
    • 1999
  • This study was conducted to investigate the effect of $\alpha$-tocopherol and cysteamine with Whitten's medium in supporting the development on in vitro maturation(IVM), in vitro fertilization (IVF) and in culture(IVC) on porcine oocytes. When the immature oocytes were cultured of $\alpha$-tocopherol for 40h, the nuclear maturation rates were 39, 4, 52.5 and 54.1%, respectivley. The nuclear maturation rates of treat groups were signficantly (P<0.05) higher than those of non-treat groups. After matureation, the oocytes were inseminated in vitro in medium 199 with ejaculated spermatoza for examination of sperm penetration, polyspermy, male pronuclear(MPN) formation, and cleavage rate. Sperm penetration rates of treat higher than the control groups(P<0.05), and MPN formation rates were significantly(P<0.05) higher on treated groups (24.3~53.1%) than control groups(14.2~21.4%). After insemination, the cleavage rates at 120hr were groups higher than control groups(P<0.05).

  • PDF

석탄층을 협재한 연암을 대상으로 한 도로터널 시공사례

  • 김주화;김선기;신경진
    • Proceedings of the Korean Society for Rock Mechanics Conference
    • /
    • 2002.10a
    • /
    • pp.1-15
    • /
    • 2002
  • 동복터널의 현장지질은 편마암과 석탄층(Coal Beds)이 협재된 암질이 매우 불량한 편암으로 구성되어 있으며, 설계 시에는 석탄층의 발달이 확인되지 않아 그 영향을 충분히 고려되지 않았다. 석탄층(두께 2~8m)은 편암의 Rock Cleavage와 같은 방향과 45~55도의 경사를 가지며 pinch out and swelling 형태로 발달이 불규칙하다. 하행선굴착 중 약 290m구간에 걸쳐 석탄층이 나타났으며, 90m 구간은 천단 및 측벽부에서 집중 발달되어 쳐대일변위가 20mm이상인 지점이 발생하는 등 상반굴착 시 111.2mm의 수평방향 내공변위가, 하반굴착 시에는 최대 127.8mm의 내공변위가 발생하였고 하반관통이후 수렴되었다. 내공변위 과다발생에 대한 대책으로 지보타입을 하향 조정하였고 측벽부는 하향 록볼트를 포함한 추가록볼트 보강을 실시하였다. 한편 터널 바닥부의 석탄층은 도로포장 후 침하문제가 예상되어 인버트를 기존 강지보공과 H-beam으로 연결.폐합한 후 콘크리트로 치환(140m구간)하여 추가변위를 최소화하였으며 무근콘크리트로 설계된 라이닝은 철근콘크리트 라이닝으로 변경 시공하였다.

  • PDF

Purification and Characterization of a Deoxyriboendonuclease from Mycobacterium smegmatis

  • Mandal, Prajna;Chakraborty, Phulghuri;Sau, Subrata;Mandal, Nitai Chandra
    • BMB Reports
    • /
    • v.39 no.2
    • /
    • pp.140-144
    • /
    • 2006
  • A deoxyriboendonuclease has been purified to near homogeneity from a fast growing mycobacterium species, M. smegmatis and characterized to some extent. The size of enzyme is about 43 kDa as determined by a denaturing gel analysis. It shows optimum activity at $32^{\circ}C$ in Tris-HCl buffer (pH 7.2) containing 2.5 mM of $MgCl_2$. Both EDTA and $K^+$ but not $Na^+$ inhibit its activity. Evidences show that the enzyme is not a restriction endonuclease but catalyzes the endonucleolytic cleavage of both the double- as well as the single-strand DNA non-specifically. It has been shown that the cleavage by this enzyme generates DNA fragments carrying phosphate groups at 5' ends and hydroxyl group at the 3' ends, respectively. Analysis reveals that no endonuclease having size and property identical to our deoxyriboendonuclease had been purified from M. smegmatis before. The property of our enzymes closely matches with the deoxyriboendonucleases purified from diverse sources including bacteria.

Characterization of Aromatic Hydrocarbon Degrading Bacteria Isolated from Pine Litter (솔잎 퇴적물에서 추출한 방향족 탄화수소물질 분해 박테리아의 동정)

  • Song, Yoon-Jae
    • Microbiology and Biotechnology Letters
    • /
    • v.37 no.4
    • /
    • pp.333-339
    • /
    • 2009
  • Using a novel pine needle agar, fifteen bacterial species were isolated from pine litter. These bacteria were able to degrade aromatic hydrocarbons derived from lignin and utilize the ortho-cleavage of the $\beta$-ketoadipate pathway to degrade protocatechuate or catechol. A different utilization array of aromatic hydrocarbons by these bacteria was also determined. This study provides the information on bacterial species living in pine litter and suggests that these bacteria have metabolic abilities to utilize aromatic hydrocarbons derived from lignin biodegradation.

Label-Free Rapid and Simple Detection of Exonuclease III Activity with DNA-Templated Copper Nanoclusters

  • Lee, Chunghyun;Gang, Jongback
    • Journal of Microbiology and Biotechnology
    • /
    • v.28 no.9
    • /
    • pp.1467-1472
    • /
    • 2018
  • In this study, DNA-templated copper nanoclusters (DNA-CuNCs) were used to detect exonuclease III (Exo III) activity, which is important for the diagnosis and therapy of several diseases. The results of this study showed that Exo III was affected by the concentrations of magnesium ions and sodium ions, and its optimal conditions for cleavage were $5mM\;Mg^{2+}$ and less than $25mM\;Na^+$. With a blunt-end DNA, more than 98% of DNA was digested by Exo III. As expected, with two or four cytosines in the terminal position of a 4-base overhanging DNA such as 5'-GGCC-3' and 5'-CCCC-3', there was little cleavage by Exo III compared with a blunt-end DNA.