• 제목/요약/키워드: biophysical characteristics

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Functional roles of Tryptophan residues in diketoreductase from Acinetobacter baylyi

  • Huang, Yan;Lu, Zhuo;Ma, Min;Liu, Nan;Chen, Yijun
    • BMB Reports
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    • 제45권8호
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    • pp.452-457
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    • 2012
  • Diketoreductase (DKR) from Acinetobacter baylyi contains two tryptophan residues at positions 149 and 222. Trp-149 and Trp-222 are located along the entry path of substrate into active site and at the dimer interface of DKR, respectively. Single and double substitutions of these positions were generated to probe the roles of tryptophan residues. After replacing Trp with Ala and Phe, biochemical and biophysical characteristics of the mutants were thoroughly investigated. Enzyme activity and substrate binding affinity of W149A and W149F were remarkably decreased, suggesting that Trp-149 regulates the position of substrate at the binding site. Meanwhile, enzyme activity of W222F was increased by 1.7-fold while W222A was completely inactive. In addition to lower thermostability of Trp-222 mutants, molecular modeling of the mutants revealed that Trp-222 is vital to protein folding and dimerization of the enzyme.

Nd:YAG 레이저(${\lambda}$ = 1444 nm)를 이용한 연골 재성형 효과 규명 (Evaluation of Effective Cartilage Reshaping using Nd:YAG laser (${\lambda}$ = 1444 nm))

  • 윤진희;윤종인
    • 대한의용생체공학회:의공학회지
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    • 제31권6호
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    • pp.472-480
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    • 2010
  • Mechanically deformed cartilage undergoes a temperature dependent phase transformation resulting in reshaping of cartilage. Laser-assisted cartilage reshaping (LCR) is recently introduced to recreate the underlying cartilage framework in structures such as ear, larynx, trachea, and nose. However, this procedure has not been fully supported by confirmed efficacy because of the lack of scientific research and its safety issues. The purpose of this study is to evaluate current laser sources to determine optimal laser wavelength for LCR using mathematical simulations and investigate optical, thermo-mechanical, and backscattering properties of cartilage after laser irradiation. The results showed that 1444 nm wavelength was effective for reshaping of cartilage with minimal thermal damage in the surrounded tissues by monte carlo simulations. Analysis of bend angle changes, thermo-mechanical characteristics, and backscattered properties may be useful to better identify the biophysical transformation responsible for stress relaxation in cartilage and develop an optical feedback control methodologies.

POST-LAUNCH RADIOMETRIC CALIBRATION OF KOMPSAT2 HIGH RESOLUTION IMAGE

  • Yoon, Jong-Suk;Lee, Kyu-Sung;Chi, Jun-Hwa;Lee, Dong-Han
    • 대한원격탐사학회:학술대회논문집
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    • 대한원격탐사학회 2006년도 Proceedings of ISRS 2006 PORSEC Volume I
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    • pp.402-405
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    • 2006
  • Radiometric calibration of optical image data is necessary to convert raw digital number (DN) value of each pixel into a physically meaningful measurement (radiance). To extract rather quantitative information regarding biophysical characteristics of the earth surface materials, radiometric calibration is often essential procedure. A sensor detects the radiation of sunlight interacted atmospheric constituents. Therefore, the amount of the energy reaching at the sensor is quite different from the initial amount reflected from the surface. To achieve the target reflectance after atmospheric correct, an initial step is to convert DN value to at-sensor radiance. A linear model, the simplest radiometric model, is applied to averaged spectral radiance for this conversion. This study purposes to analyze the sensitivity of several factors affecting on radiance for carrying out absolute radiometric calibration of panchromatic images from KOMPSAT2 launched at July, 2006. MODTRAN is used to calculate radiance at sensor and reflectance of target is measured by a portable spectro-radiometer at the same time the satellite is passing the target for the radiometric calibration. As using different contents of materials composing of atmosphere, the differences of radiance are investigated. Because the spectral sensitivity of panchromatic images of KOMPSAT2 ranges from 500 to 900 nm, the materials causing scattering in visible range are mainly considered to analyze the sensitivity. According to the verified sensitivity, direct measurement can be recommenced for absolute radiometric calibration.

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해산 양식어류로부터 분리된 연쇄구균증의 원인균, Lactococcus garvieae에 대한 연구 (The study on the causal agent of Streptococcicosis (Lactococcus garvieae), isolated from cultured marine fishes)

  • 이덕찬;이재일;박찬일;박수일
    • 한국어병학회지
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    • 제14권2호
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    • pp.71-80
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    • 2001
  • 본 연구는 우리 나라의 해산 양식어류 양식장에서 발생하는 연쇄구균증 원인균의 종 조성과 미생물학적 연쇄구균증 원인균의 종 조성과 미생물학적 특성을 밝히고자 하였다. 안구 백탁, 안구 출혈, 아가미뚜껑 출혈 및 복부 팽만 등의 증상이 관찰되는 해산 양식어류에서 분리된 연쇄상구균의 여러 균주들을 Lactococcus garvieae와 생리학적, 생화학적, 혈청학적 특성을 비교하였다. 또한 polymerase chain reaction(PCR)assay로 분리 균주들과 L.garvieae의 연관성을 조사하였으며 연쇄구균증 원인균들의 분포 특성을 조사하였다. 연쇄구균증을 나타내는 3종의 해산 양식어류로부터 연쇄상구균 35균주를 분리하였으며, 이 균주들의 생리, 생화학적 특성을 L.garvieae와 비교해 본 결과 15 균주가 L.garvieae에 속하는 것을 알 수 있었다. 분리균주를 참조균주인 ATCC49156토끼 향혈청으로 슬라이드 응집 시험한 결과 L.garvieae $KG^+$ type과 응집하는 균주가 7균주로 관찰되었다. 또한 L.garvieae의 특이 primers, pLG-1(5`-CATAACAATGAGATCGC-'3)와 pLG-2(5'-GCACCCTCGCGGGTTG-3')를 사용한 16S rRNA의 PCR 시험 결과 분리균주 중 21 균주가 예상 band를 형성하여 L.garvieae로 판단하였다. 이상의 결과에 따르면 35종의 분리균주 중 L.garvieae가 21 균주, Enterococcus sp.rk 5 균주, Streptococcus sp.가 9종으로 조사된 지역에서 연쇄구균에 의한 질병 발생은 L.garvieae가 우점을 차지함을 알 수 있었다.

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제노푸스 Cx38 세포막채널의 단일채널분석 (Single Channel Analysis of Xenopus Connexin 38 Hemichannel)

  • 천미색;오승훈
    • 생명과학회지
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    • 제17권11호
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    • pp.1517-1522
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    • 2007
  • 간극결합(intercellular channel)은 인접하는 두 세포사이에 형성된 이온채널이며 이를 통해서 각종 이온, 이차 신호전달물질, 그리고 1 kDa 미만의 대사물질들이 통과한다. 아울러, sodium 혹은 potassium 이온채널처럼 반쪽의 간극결합(connexon 혹은 hemichannel)도 세포막채널로서 작용을 한다. 현재까지 간극결합을 구성하는 connexin (Cx) 단위체는 26종류 이상이 확인되었다. 이 가운데, Cx32, Cx38, Cx46 그리고 Cx50 만이 간극결합채널뿐만 아니라 세포막채널로서도 기능을 수행한다. Xenopus oocytes에서 connexin 38 (Cx38)이 발현하는 것으로 알려져 있지만 Cx38의 생물리학적 특성이 단일채널수준에서 연구가 진행된 경우는 없다. 이번 연구에서는 Cx38 채널의 생물리학적 특성, 즉 전압-의존적 개폐와 투과성(전기전도도와 이온선택성)을 알아보고자 단일채널기록을 수행하였다. Cx38 hemichannel은 전압-의존적인 빠른 개폐와 느린 개폐의 특성을 보였다. 양성전압 환경에서는 Cx38 채널이 낮은 열릴 확률(open probability)로 빠른 개폐가 유도된 반면, 음성전압에서는 느린 개폐가 높은 열릴 확률로 유도되었다. bi-ionic 실험을 통하여, Cx38 채널은 양이온보다 음이온을 더 선택 적으로 통과시킨다는 점을 알게 되었다. Cx38의 아미노산서열을 살펴보면, 아미노말단부위에 전하를 띠는 5개의 아미노산 잔기가 존재한다. 앞으로 이들 잔기를 치환시킨 돌연변이 Cx38 채널을 이용하여 과연 이들 아미노산 부위가 전압-의존적 개폐와 투과성에 관여하는 지 여부를 조사하는 연구는 매우 흥미로운 결과를 도출할 것으로 기대한다.

하천의 물리적 생태적 특성 연구 - 경기지방 모래하천의 사례 - (Study on the Biophysical and Ecological Characteristics of the Streams - A Case of the Sand Streams in Kyonggi-Do District-)

  • 김혜주
    • 한국환경생태학회지
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    • 제19권3호
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    • pp.215-230
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    • 2005
  • 모래하천의 물리적$\cdot$생태적 특성을 분석하기 위해 자연환경이 유사한 청미천, 양화천, 복하천을 조사$\cdot$평가하였다. 물리적 구조 평가결과 청미천과 양화천의 생태성은 "양호$\sim$보통", 복하천은 "보통"으로 평가되었으며, 대상하천은 공통적으로 사행과 퇴적작용이 활발한 반면 침식은 약한 것으로 나타났다. 3개 하천의 중점조사구에 대한 식물조사결과물과 가장 인접한곳(정수역)으로부터 갈풀$\rightarrow$달뿌리풀$\rightarrow$갈대$\rightarrow$버드나무$\rightarrow$물푸레나무$\rightarrow$아까시나무$\rightarrow$신나무 군락 순으로 발달하였다. 저서성대형무척추동물의 경우 공통종은 청정지 역에서 주로 출현하는 무의하루살이, 검은 물잠자리 등이며, 우점종은 실지렁이와 깔따구과 sp. 1이었다.

한국산 메기(Silurus asotus)의 질병에 관한 연구 III. Edwardsiella ictaluri 감염증 (Studies on disease of catfish, Silurus asotus, in Korea. III. Edwardsiella ictaluri infection.)

  • 박성우;김영길
    • 한국어병학회지
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    • 제7권2호
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    • pp.105-112
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    • 1994
  • 1993년 전북도 관내에서 순환여과식으로 사육중인 한국산 메기에 세균성 질병이 발생하여, 이 질병에 의한 폐사율이 4개월 동안에 30%에 달하였다. 병어는 양어지의 가장자리에서 두부를 위로 한채 힘없이 물표면을 헤엄치거나 때로는 회전 발광유영을 하는 개체가 많았다. 외견상 특정적인 증상은 두부와 가슴지느러미의 기부에 궤양 병소가 형성되거나 아랫턱 주변의 출혈을 주증상으로 하고 있었다. 병어의 뇌, 신장, 비장 및 간장으로부터 원인균을 분리하여 생화학적 특성과 생물학적 특성을 조사한 바, Edwardsiella ictaluri로 동정되었다. 분리균을 한국산 메기, 차넬메기 및 잉어에 복강주사하여 병원성을 조사한 결과 한국산 메기와 차넬메기에는 병원성이 있었지만, 잉어에 대한 병원성은 없었다.

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주민참여형 복원을 위한 훼손지의 통합적 유형 구분 체계 개발 (Development of the Integrative System to Categorize Damaged Areas for Participatory Restoration by Local Residents)

  • 안동만;김인호;최형석;이재영;이지영;이영;류선정;민소영;윤민호
    • 한국환경복원기술학회지
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    • 제11권2호
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    • pp.87-103
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    • 2008
  • Despite its high level of symbolic and ecological values, BaigDooDaeGahn, about 684km long stretch of mountains in the eastern part of Korean peninsular, has been widely destroyed and barely recovered. While Korean government enacted a special law in 2005 to protect these areas and designated about 2,658 $km^2$ as the protection zone in 2007, there were a number of sites inside that had been disturbed by mining, illegal crop cultivations, stone quarry, development of resort facilities, construction of roads, and other human activities. To restore these damaged areas in a sustainable manner, the integrative system to categorize damaged areas for participatory restoration by local residents was suggested by this study. The most distinguished feature of the proposed system was to integrate the existing restoration approach focusing on biophysical conditions into the sustainability-building approach to reactivate socio-economic conditions of local society, called 'restoration of eco-cultural community'. As an entry stage to design the new restoration system including processes and procedures, the damaged areas had to be re-categorized by two characteristics, their physical conditions in terms of possibility of public participatory restoration and the readiness of local society required for pursuing endogenous development. More detailed considerations regarding these two characteristics and three different categories has been suggested and discussed.

Biochemical and Molecular Characterization of Glycerol Dehydrogenase from Klebsiella pneumoniae

  • Ko, Gyeong Soo;Nguyen, Quyet Thang;Kim, Do Hyeon;Yang, Jin Kuk
    • Journal of Microbiology and Biotechnology
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    • 제30권2호
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    • pp.271-278
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    • 2020
  • Glycerol dehydrogenase (GlyDH) catalyzes the oxidation of glycerol to dihydroxyacetone (DHA), which is the first step in the glycerol metabolism pathway. GlyDH has attracted great interest for its potential industrial applications, since DHA is a precursor for the synthesis of many commercially valuable chemicals and various drugs. In this study, GlyDH from Klebsiella pneumoniae (KpGlyDH) was overexpressed in E. coli and purified to homogeneity for biochemical and molecular characterization. KpGlyDH exhibits an exclusive preference for NAD+ over NADP+. The enzymatic activity of KpGlyDH is maximal at pH 8.6 and pH 10.0. Of the three common polyol substrates, KpGlyDH showed the highest kcat/Km value for glycerol, which is three times higher than for racemic 2,3-butanediol and 32 times higher than for ethylene glycol. The kcat value for glycerol oxidation is notably high at 87.1 ± 11.3 sec-1. KpGlyDH was shown to exist in an equilibrium between two different oligomeric states, octamer and hexadecamer, by size-exclusion chromatography analysis. KpGlyDH is structurally thermostable, with a Tm of 83.4℃, in thermal denaturation experiment using circular dichroism spectroscopy. The biochemical and biophysical characteristics of KpGlyDH revealed in this study should provide the basis for future research on its glycerol metabolism and possible use in industrial applications.

소득수준에 따른 성인여성의 심혈관계 건강상태와 건강행위 (Comparison of Cardiovascular Health Status and Health Behaviors in Korean Women based on Household Income)

  • 박영주;신나미;윤지원;최지원;이숙자
    • 대한간호학회지
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    • 제40권6호
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    • pp.831-843
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    • 2010
  • Purpose: In this study cardiovascular health status and health behavior of Korean women based on their household income were explored. Methods: For this cross-sectional study, 91 women residing in the community were recruited to complete survey questionnaires and biophysical tests including blood pressure (BP), body mass index (BMI), body fat rate, waist circumference (WC), and blood chemistry tests. Results: Compared to non-low income women (NLIW), low income women (LIW) were more likely to be older, less educated, and jobless, and further more LIW were postmenopause and reported having been diagnosed with hypertension or hypercholesterolemia. Significant differences were found in systolic BP, triglyceride level, BMI, body fat rate, and WC between the groups. Two fifths of the LIW had indications for metabolic syndrome. Their 10-yr risk estimate of myocardioal infarction or coronary death demonstrated a higher probability than that of NLIW. Although these significant differences were due to age gap between the groups, advanced age is known to be one of the key characteristics of LIW as well as a non-modifiable risk factor. Conclusion: Effective community programs for vulnerable women at risk of cardiovascular disease should be based on strategies targeting unhealthy behaviors and modifiable risk factors.