• 제목/요약/키워드: biomedical data classification

검색결과 129건 처리시간 0.029초

인공판막음의 새로운 스펙트럼 분석 연구 (New Sound Spectral Analysis of Prosthetic Heart Valve)

  • 이희종;김상현;장병철;탁계래;조범구;유선국
    • 대한의용생체공학회:학술대회논문집
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    • 대한의용생체공학회 1997년도 추계학술대회
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    • pp.75-78
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    • 1997
  • In this paper we present new sound spectral analysis methods or prosthetic heart valve sounds. Phonocardiograms(PCG) of prosthetic heart valve were analyzed in order to derive frequency domain feature suitable or the classification of the valve state. The fast orthogonal search method and MUSIC (MUltiple SIgnal Classification) method are described or finding the significant frequencies in PCG. The fast orthogonal search method is effective with short data records and cope with noisy, missing and unequally-spaced data. MUSIC method's key to the performance is the division of the information in the autocorrelation matrix or the data matrix into two vector subspaces, one a signal subspace and the other a noise subspace.

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컨볼루션 신경망 모델을 이용한 분류에서 입력 영상의 종류가 정확도에 미치는 영향 (The Effect of Type of Input Image on Accuracy in Classification Using Convolutional Neural Network Model)

  • 김민정;김정훈;박지은;정우연;이종민
    • 대한의용생체공학회:의공학회지
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    • 제42권4호
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    • pp.167-174
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    • 2021
  • The purpose of this study is to classify TIFF images, PNG images, and JPEG images using deep learning, and to compare the accuracy by verifying the classification performance. The TIFF, PNG, and JPEG images converted from chest X-ray DICOM images were applied to five deep neural network models performed in image recognition and classification to compare classification performance. The data consisted of a total of 4,000 X-ray images, which were converted from DICOM images into 16-bit TIFF images and 8-bit PNG and JPEG images. The learning models are CNN models - VGG16, ResNet50, InceptionV3, DenseNet121, and EfficientNetB0. The accuracy of the five convolutional neural network models of TIFF images is 99.86%, 99.86%, 99.99%, 100%, and 99.89%. The accuracy of PNG images is 99.88%, 100%, 99.97%, 99.87%, and 100%. The accuracy of JPEG images is 100%, 100%, 99.96%, 99.89%, and 100%. Validation of classification performance using test data showed 100% in accuracy, precision, recall and F1 score. Our classification results show that when DICOM images are converted to TIFF, PNG, and JPEG images and learned through preprocessing, the learning works well in all formats. In medical imaging research using deep learning, the classification performance is not affected by converting DICOM images into any format.

기계학습 기반 췌장 종양 분류에서 프랙탈 특징의 유효성 평가 (Evaluation of the Effect of using Fractal Feature on Machine learning based Pancreatic Tumor Classification)

  • 오석;김영재;김광기
    • 한국멀티미디어학회논문지
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    • 제24권12호
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    • pp.1614-1623
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    • 2021
  • In this paper, the purpose is evaluation of the effect of using fractal feature in machine learning based pancreatic tumor classification. We used the data that Pancreas CT series 469 case including 1995 slice of benign and 1772 slice of malignant. Feature selection is implemented from 109 feature to 7 feature by Lasso regularization. In Fractal feature, fractal dimension is obtained by box-counting method, and hurst coefficient is calculated range data of pixel value in ROI. As a result, there were significant differences in both benign and malignancies tumor. Additionally, we compared the classification performance between model without fractal feature and model with fractal feature by using support vector machine. The train model with fractal feature showed statistically significant performance in comparison with train model without fractal feature.

합성곱 신경망을 활용한 위내시경 이미지 분류에서 전이학습의 효용성 평가 (Evaluation of Transfer Learning in Gastroscopy Image Classification using Convolutional Neual Network)

  • 박성진;김영재;박동균;정준원;김광기
    • 대한의용생체공학회:의공학회지
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    • 제39권5호
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    • pp.213-219
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    • 2018
  • Stomach cancer is the most diagnosed cancer in Korea. When gastric cancer is detected early, the 5-year survival rate is as high as 90%. Gastroscopy is a very useful method for early diagnosis. But the false negative rate of gastric cancer in the gastroscopy was 4.6~25.8% due to the subjective judgment of the physician. Recently, the image classification performance of the image recognition field has been advanced by the convolutional neural network. Convolutional neural networks perform well when diverse and sufficient amounts of data are supported. However, medical data is not easy to access and it is difficult to gather enough high-quality data that includes expert annotations. So This paper evaluates the efficacy of transfer learning in gastroscopy classification and diagnosis. We obtained 787 endoscopic images of gastric endoscopy at Gil Medical Center, Gachon University. The number of normal images was 200, and the number of abnormal images was 587. The image size was reconstructed and normalized. In the case of the ResNet50 structure, the classification accuracy before and after applying the transfer learning was improved from 0.9 to 0.947, and the AUC was also improved from 0.94 to 0.98. In the case of the InceptionV3 structure, the classification accuracy before and after applying the transfer learning was improved from 0.862 to 0.924, and the AUC was also improved from 0.89 to 0.97. In the case of the VGG16 structure, the classification accuracy before and after applying the transfer learning was improved from 0.87 to 0.938, and the AUC was also improved from 0.89 to 0.98. The difference in the performance of the CNN model before and after transfer learning was statistically significant when confirmed by T-test (p < 0.05). As a result, transfer learning is judged to be an effective method of medical data that is difficult to collect good quality data.

자궁경부 영상에서의 라디오믹스 기반 판독 불가 영상 분류 알고리즘 연구 (A Radiomics-based Unread Cervical Imaging Classification Algorithm)

  • 김고은;김영재;주웅;남계현;김수녕;김광기
    • 대한의용생체공학회:의공학회지
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    • 제42권5호
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    • pp.241-249
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    • 2021
  • Recently, artificial intelligence for diagnosis system of obstetric diseases have been actively studied. Artificial intelligence diagnostic assist systems, which support medical diagnosis benefits of efficiency and accuracy, may experience problems of poor learning accuracy and reliability when inappropriate images are the model's input data. For this reason, before learning, We proposed an algorithm to exclude unread cervical imaging. 2,000 images of read cervical imaging and 257 images of unread cervical imaging were used for this study. Experiments were conducted based on the statistical method Radiomics to extract feature values of the entire images for classification of unread images from the entire images and to obtain a range of read threshold values. The degree to which brightness, blur, and cervical regions were photographed adequately in the image was determined as classification indicators. We compared the classification performance by learning read cervical imaging classified by the algorithm proposed in this paper and unread cervical imaging for deep learning classification model. We evaluate the classification accuracy for unread Cervical imaging of the algorithm by comparing the performance. Images for the algorithm showed higher accuracy of 91.6% on average. It is expected that the algorithm proposed in this paper will improve reliability by effectively excluding unread cervical imaging and ultimately reducing errors in artificial intelligence diagnosis.

Cross platform classification of microarrays by rank comparison

  • Lee, Sunho
    • Journal of the Korean Data and Information Science Society
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    • 제26권2호
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    • pp.475-486
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    • 2015
  • Mining the microarray data accumulated in the public data repositories can save experimental cost and time and provide valuable biomedical information. Big data analysis pooling multiple data sets increases statistical power, improves the reliability of the results, and reduces the specific bias of the individual study. However, integrating several data sets from different studies is needed to deal with many problems. In this study, I limited the focus to the cross platform classification that the platform of a testing sample is different from the platform of a training set, and suggested a simple classification method based on rank. This method is compared with the diagonal linear discriminant analysis, k nearest neighbor method and support vector machine using the cross platform real example data sets of two cancers.

요류검사 시스템의 구현과 요류파라미터의 유용성 평가 (Implementation on the Uroflowmetry System and Usefulness Estimation of the Uroflow Parameters)

  • 한봉효;정도운;김우열;배진우;손정만;김재현;박준모;정문기;전계록
    • 대한전자공학회:학술대회논문집
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    • 대한전자공학회 2002년도 하계종합학술대회 논문집(5)
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    • pp.293-296
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    • 2002
  • In this study, the object is a development on uroflowmetry system to detect a voiding symptom conveniently in home or hospital. The hardware was composed of mechanism and system circuit part, the software was divided into firmware and PC program part. The following experiment was performed to evaluate an ability of classification and fitness. First, the following parameters was calculated in each flow curve pattern. The parameters are MFR, AFR, VOL, VT, FT, and TMF. A significant difference among parameters was examined through a statistical analysis for extracted parameters between normal and abnormal group. In the next work, the following experimentation was performed to classify the voiding symptom. Analysis of congregate rate was examined to find out classification possibility about each symptom of BPH, voiding difficulty, detrusor failure and hyperreflexia, unstable bladder. The uroflow data with the above symptom was divided into normal and abnormal group using fuzzy classifier. and that was performed appending the other group again. Fuzzy classification result using MFR and AFR was superior by 89.6 % more than grouping evaluation including VOL.

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Japanese Vowel Sound Classification Using Fuzzy Inference System

  • Phitakwinai, Suwannee;Sawada, Hideyuki;Auephanwiriyakul, Sansanee;Theera-Umpon, Nipon
    • 한국융합학회논문지
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    • 제5권1호
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    • pp.35-41
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    • 2014
  • An automatic speech recognition system is one of the popular research problems. There are many research groups working in this field for different language including Japanese. Japanese vowel recognition is one of important parts in the Japanese speech recognition system. The vowel classification system with the Mamdani fuzzy inference system was developed in this research. We tested our system on the blind test data set collected from one male native Japanese speaker and four male non-native Japanese speakers. All subjects in the blind test data set were not the same subjects in the training data set. We found out that the classification rate from the training data set is 95.0 %. In the speaker-independent experiments, the classification rate from the native speaker is around 70.0 %, whereas that from the non-native speakers is around 80.5 %.

스트립을 이용한 요분석시스템의 개발과 퍼지추론에 의한 검사결과 평가에 관한 연구 (A Study on the Development of Urine Analysis System using Strip and Evaluation of Experimental Result by means of Fuzzy Inference)

  • 전계록;이승진;최병철;안시훈;하광;김주열;김재형
    • 대한의용생체공학회:의공학회지
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    • 제19권5호
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    • pp.477-486
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    • 1998
  • 본 연구에서는 요분석용 스트립을 이용하여 요의 상태를 정량적·정성적으로 측정할 수 있는 요분석시스템을 구현하였다. 요분석시스템의 분석 알고리듬은 온도 변화, 전원 노이즈 통의 외란에 강인한 특성을 나타내기 위하여 퍼지 논리를 적용하였다. 강인하고 안정적인 요분석시스템을 설계하기 위하여 스트립 9가지 패드의 분강학적 특성을 검토하였다. 요분석시스템 하트웨어와 소프트웨어로 구성되었다. 요분석시스템의 하드웨어는 단일칩 마이크로프로세서를 사용하였고, 주변장치들로는 광하부, 트레이 제어, 전치증폭부, PC와의 통신, 열전사 프린터 및 동작 상태 표시기로 구성하였다. 요분석시스템의 소프트웨어는 시스템 프로그램과 분류 프로그램으로 구성하였다. 시스템 프로그램은 시스템 제어와 데이터 취득 및 분석을 수행하도록 하였다. 분규 프로그램은 퍼지추론부와 멤버쉽함수 발생기로 구성되었다 멤버쉽함수 발생기는 정도관리의 통계학적 방법을 이용하여 삼각형 멤버쉽함수를 생성하였다. 측정된 데이터는 PC로 전송되고, 전송된 데이터는 C++로 작성된 데이터 관리 및 취득 프로그램에 의해 저장된다. 요분석시스템의 정확도와 퍼지분류기의 안정성은 표준시료를 이용하여 평가하였다. 실험결과는 검사항목과 만족한 일치를 보였다.

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Enhancing Gene Expression Classification of Support Vector Machines with Generative Adversarial Networks

  • Huynh, Phuoc-Hai;Nguyen, Van Hoa;Do, Thanh-Nghi
    • Journal of information and communication convergence engineering
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    • 제17권1호
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    • pp.14-20
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    • 2019
  • Currently, microarray gene expression data take advantage of the sufficient classification of cancers, which addresses the problems relating to cancer causes and treatment regimens. However, the sample size of gene expression data is often restricted, because the price of microarray technology on studies in humans is high. We propose enhancing the gene expression classification of support vector machines with generative adversarial networks (GAN-SVMs). A GAN that generates new data from original training datasets was implemented. The GAN was used in conjunction with nonlinear SVMs that efficiently classify gene expression data. Numerical test results on 20 low-sample-size and very high-dimensional microarray gene expression datasets from the Kent Ridge Biomedical and Array Expression repositories indicate that the model is more accurate than state-of-the-art classifying models.