• Journal of Ecology and Environment
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• v.40 no.2
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• pp.107-119
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• 2016

Background: Previous studies on the biological integrity on habitat and landuse patterns demonstrated ecological stream health in the view of regional or macrohabitat scale, thus ignored the mesoscale habitat patterns of pool, riffle, and runs in the stream health analysis. The objective of this study was to analyze influences on the mesohabitat structures of pool, riffle, and run reaches on the fish guilds and biological integrity in Geum-River Watershed. Results: The mesohabitat structures of pool, riffle, and run reaches influenced the ecological stream health along with some close relations on the fish trophic and tolerance guilds. The mesoscale components altered chemical water quality such as nutrients (TN, TP) and BOD and these, then, determined the primary productions, based on the sestonic chlorophyll-a. The riffle-reach had good chemical conditions, but the pool-reach had nutrient enrichments. The riffle-reach had a predominance of insectivores, while the pool-reach has a predominance of omnivores. Also, the riffle-reach had high proportions of sensitive fish and insectivore fish, and the pool-reach had high proportions of tolerant species in the community composition. The intermediate fish species in tolerance and omnivorous fish species in the food linkage dominated the community in the watershed, and the sensitive and insectivorous fishes decreased rapidly with a degradation of the water quality. All the habitat patterns were largely determined by the land-use patterns in the watershed. Conclusions: Trophic guilds and tolerance guilds of fish were determined by land-use pattern and these determined the stream health, based on the Index of Biological Integrity. This study remarks the necessity to include additional variables to consider information provided by mesohabitats and land-use distributions within the selected stream stretch. Overall, our data suggest that land-use pattern and mesohabitat distribution are important factors to be considered for the trophic and tolerance fish compositions and chemical gradients as well as ecological stream health in the watershed.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.25 no.2
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• pp.55-67
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• 2022

Land use is a critical factor that affects the hydrological characteristics of watersheds, thereby determining the biological condition of streams. This study analyzes the effects of land uses in the watersheds on biological indicators of streams across the Han River basin using a linear model (LM) and generalized additive model (GAM). LULC and biological monitoring data of streams were obtained from the Korean Ministry of Environment. The proportions of urban, agricultural, and forest areas in the watersheds were regressed to the three biological indicators, including diatom, benthic macroinvertebrate, and fish of streams. The estimated LM and GAM models for the biological indicators were then compared, using regression determination R² and AIC values. The results revealed that GAM models performed better than the LM models in explaining the variances of biological indicators of streams, indicating the non-linear relationships between biological indicators and land uses in watersheds. Also, the results suggested that the indicator of macroinvertebrates was the most sensitive indicator to land uses in watersheds. Although non-linear relationships between watershed land uses and biological indicators of streams could vary among biological indicators, it was consistent that streams' biological integrity significantly deteriorated by a relatively low percentage of urban areas. Meanwhile, biological indicators of streams were negatively affected by the relatively high percentage of agricultural areas. The results of this study can be integrated into effective quantitative criteria for the watershed management and land use plans to enhance the biological integrity of streams. In specific, land uses management plans in watersheds may need more close attention to urban land use changes than agricultural land uses to sustain the biological integrity of streams.

• Proceedings of the National Institute of Ecology of the Republic of Korea
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• v.5 no.2
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• pp.43-49
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• 2024

Ecological monitoring provides indispensable data for biodiversity conservation and sustainable resource management. However, the complexity and variability inherent in ecological monitoring data necessitate robust verification processes to ensure data integrity. This study employed Benford's Law, a statistical principle traditionally used in fields such as finance and health sciences, to evaluate the authenticity of ecological monitoring data related to the abundance of migratory bird species across various locations in South Korea. Benford's Law anticipates a specific logarithmic distribution of leading digits in naturally occurring numerical datasets. Our investigation involved two stages of analysis: a first-order analysis considering the leading digit and a second-order analysis examining the first two digits of bird population counts. While the first-order analysis displayed moderate conformity to Benford's Law that suggested overall data integrity, the second-order analysis revealed more pronounced deviations, indicating potential inconsistencies or inaccuracies in certain subsets of the data. Although our data did not perfectly align with Benford's Law, these deviations underscore the complex nature of ecological research, which is influenced by a multitude of environmental, methodological, and human factors.

• Molecules and Cells
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• v.26 no.6
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• pp.590-594
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• 2008

brc-2, an ortholog of BRCA2 in Caenorhabditis elegans, is essential in the maintenance of genetic integrity. In C. elegans, cellular location correlates with meiotic progression, and transgene-induced cosuppression is observed in the germ line but not in somatic cells. We used these unique features to dissect the role of brc-2 in the germ line from that in somatic cells. In situ hybridization of wild type animals revealed that brc-2 gene expression was higher in oocytes than in other germline cells, and was barely detectable in mitotic cells. In contrast, germ cells containing multicopies of the brc-2 transgene showed no significant in situ hybridization signal at any oogenesis stage, confirming that brc-2 expression was functionally cosuppressed in the transgenic germ line. RAD-51 foci formation in response to DNA damage was abrogated in brc-2-cosuppressed germ cells, whereas wild-type germ cells showed strong RAD-51 foci formation. These germ cells exhibited massive chromosome fragmentation and decompaction instead of six bivalent chromosomes in diakinesis. Accordingly, lethality was observed after the early stage of germline development. These results suggest that brc-2 plays essential roles in chromosome integrity in early prophase, and therefore is crucial in meiotic progression and embryonic survival.

• Korean Journal of Environmental Biology
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• v.37 no.2
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• pp.204-216
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• 2019

To evaluate the biological integrity of aquatic ecosystems, we developed Korean multimetric diatom index (KMDI) using metrics that many researchers have been previously described, and compared to single-metric diatom index such as trophic diatom index (TDI) and diatom assemblage index to organic pollution (DAIpo). For the biological and environmental data, we investigated the epilithic diatoms, water quality and the land-use for 923 sites in Korean streams between 2013-2017, and estuaries between 2010-2017, respectively. Five appropriate metrics were selected according to the following steps; 1) extraction of 300 potential metrics (biological, chemical, physical, and geographical) based on previous references, of these, 2) 46 samples having high separation power were selected, 3) the selected metrics were each tested for variability, redundancy, and sensitivity to the environments, finally 4) construction of multi-metric diatom index comprising single type metrics such as TDI, DAIpo, % motile diatoms, % Achnanthes / (Achnanthes+Navicula), and % number of Gomphonema species. The biological integrity of the 233 sites from the Geum River basin were independently investigated using KMDI. Collectively, the new KMDI showed high sensitivity and explanatory power for environmental factors such as land-use, biochemical oxygen demand, total nitrogen, and electric conductivity. However, it had slightly higher biological integrity for the same sites as compared to single type diatom metrics. Finally, more data accumulation from all over Korea and the development of acceptable diatom metrics were required.

• Journal of Embryo Transfer
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• v.28 no.3
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• pp.265-271
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• 2013

Cryopreservation and in vitro fertilization (IVF) protocols are important in genetic studies and applications to transgenic animals. Various studies about boar sperm cryopreservation have been studied for a long time. Those were about the use of extenders, the choice of sugars, the cooling and warming rates. The factors that influence the boar sperm are the dramatic changes in temperatures, osmotic and toxic stresses, and reactive oxygen species (ROS) generation. Among these factors, ROS generation is the main damage to DNA which is a principal genetic material and the most important for the practical applications. So we wondered whether ROS generation could be reduced. In previous study, monothioglycerol (MTG) was essential for the culture of embryo stem cells. Therefore we added MTG in the freezing extender based on lactose-egg yolk (LEY) with trehalose. For the assessment of the frozen-thawed sperm, we focused onmotility, membrane integrity and DNA damage. First, we used a computer-aided sperm analysis system for overall conditions of sperm such as motility and viability. Then we performed the sperm chromatin structure assay for DNA integrity and hypo-osmotic swelling test for membrane integrity. And our result showed the existence of MTG in the freezing extender caused less damage to DNA and higher motility in frozen-thawed boar sperm. Also we checked a relative antioxidant activity of MTG in modified Modena B extender. We concluded that this reagent can activate sperm mitochondria at MTG $0.2{\mu}M$, contribute to sperm motility and DNA integrity but there was no significant difference on membrane integrity. Also antioxidant activity of MTG in modified Modena B extender was proved.

• Korean Journal of Environmental Biology
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• v.18 no.2
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• pp.215-226
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• 2000

We evaluated the aquatic ecosystem of Keum-Ho River through applications of the Index of Biological Integrity (IBI) using fish assemblages and Qualitative Habitat Evaluation Index (QHEI) during June-November 1999. Overall IBI values ranged from 13 to 37 with mean of 23 (n=25, Std. error= 1.16), indicating a "Poor" or "Very Poor" condition according to the criteria of Karr (1981) and U.S. EPA (1993). The values of mean IBI declined at the rate of $0.22km^{-1}$(($r^2$=0.91, p< 0.05) along the longitudinal distance from the headwaters to the down-river. Reduced IBI values at down-river (St. 4 and 5) were attributed to the decreases in riffle benthic species and the relative abundance of insectivore and increases in tolerant species, anormalies and exotic species. Spatial pattern in IBI agreed with QHEI values, which showed a linear relation ($r^2$=0.998, p< 0.001) with mean number of species. Field measurements of conductivity and pH, indicators for variation of conservative ions, showed that the river water was diluted up to 30% by summer precipitation and surface run-off from the watershed, resulting in physical and chemical instability during the monsoon. For these reasons, average IBI values during monsoon and postmonsoon decreased more than 20% compared to pre -monsoon. Before the perturbation of the system (i.e., pre-monsoon), values of QHEI were inversely correlated (r=-0.99, p< 0.0001) with realtive abundance of native omnivore and were positively correlated (r=0.87, p=0.05) with relative abundance of native carnivore. These results indicate that spatial degradation of habitat quality modified the species richness and trophic structure, producing decreased IBI values. (Biological integrity, IBI, Monsoon, Habitat, River, Korea)bitat, River, Korea)

• Korean Journal of Biological Psychiatry
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• v.22 no.2
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• pp.63-77
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• 2015

Objectives The combination extract of four kinds of herbs, Gastrodia elata, Liriope platyphylla, Dimocarpus longan, and Salvia miltiorrhiza, has shown to have memory improving effects in mice. The aim of this study was to investigate the efficacy and safety of the herbal mixture for improving working memory as well as microstructural changes in white matter integrity in individuals with subjective memory complaints. Methods Seventy-five individuals with subjective memory complaints were assigned to receive either placebo (n = 15) or herbal mixture (low-dose group, n = 30 and high-dose group, n = 30) supplementation in an 8-week, randomized, double-blind, placebo-controlled clinical trial. Changes in working memory performance and fractional anisotropy (FA) values reflecting white matter integrity from baseline to 8-week endpoint were assessed. Results The herbal mixture group showed an increase in working memory performance compared to the placebo group (p for interaction = 0.001). In addition, the herbal mixture group showed an increase in FA values in the temporo-parietal regions (corrected p < 0.05), which are crucially involved in working memory function and are among the most affected regions in patients with cognitive impairments. Conclusions Findings from this study indicate that the herbal mixture may be a promising therapeutic option for individuals with subjective memory complaints.

• Journal of Korean Society on Water Environment
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• v.22 no.5
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• pp.757-767
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• 2006

Biological assessments are the primary tool for evaluating the biological condition of a water body and makes it possible to understand accumulative and long-term effect of stressors. They also provide reliable biological information for which disturbed systems are to be restored. Sustainable water environment is not enough with attaining only the clean water, but it should sustain healthy and diverse aquatic life. Aquatic organisms are affected by various factors, including not only water quality but also habitat condition and stressors, and thus good condition of both physical and chemical water quality is prerequisite for sustaining healthy organisms. Therefore, biological assessment, along with other physical and chemical assessments, are crucial for evaluating the health of a water body. Overall, sustainability of water environment demands the attainment and maintenance of ecological integrity, which is resulted from the combination of physical, chemical and biological integrity. The biological criteria will play very important role in the water resource management and policy issues, and thus bioassessment program should be fully implemented and supported eventually by the law. To keep ecosystem health of water environment safely from the toxic pollutants and other stressors, the following suggestions need to be considered in environmental quality standards in Korea. For the first step, the biological indicators need to be introduced in evaluating river quality condition; they provide a qualitative description of biological condition of water body. Secondly, the biological water quality standards using biotic indices should be developed and implemented under the consideration of characteristics of Korean river systems. Lastly, the ecological status classification regime (ESCR) should be developed and introduced; it could be used in quality assessment of the water environment in general. In developing ESCR, integration of physico-chemical, biological, and habitat parameters should be taken into account.

• Korean Journal of Ecology and Environment
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• v.43 no.1
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• pp.24-34
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• 2010

This study was carried out to analyze some influences on ecological health conditions, threaten by various stressors such as physical, chemical and biological parameters. We collected samples in 2008 from three zones of upstream, midstream and downstream, Gap Stream. We applied multi-metric fish assessment index (MFAI), based on biotic integrity model to the three zones along with habitat evaluations based on Qualitative Habitat Evaluation Index (QHEI). We also examined fish fauna and compositions, and analyzed relations with MFAI values, QHEI values, and various guild types. Chemical parameters such as oragnic matter (BOD, COD), nutrients (TP, $NH_3$-N), coli-form number (as MPN), and suspended solids (SS) were analyzed to identify the relationship among multiple stressor effects. Using the sentinel species of Zacco platypus, the population structures and condition factors were analyzed along with DNA damages related with genotoxicant effects by comet assay. This study using all these parameters showed that stream condition was degraded along the longitudinal gradient from upstream to downstream, and the downstream, especially, was impacted by nutrient enrichment and toxicant exposure from the point source, wastewater treatment plant. Overall results indicated that our approaches applying various parameters may be used as a cause-effect technique in the stream health assessments and also used as a pre-warning tool for diagnosis of ecological degradation.