• 인터넷정보학회논문지
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• 제16권1호
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• pp.39-46
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• 2015

본 논문에서는 모바일 환경에서 미세세포 영상으로부터 셀을 자동 검출하고 계수하는 자동화 방법을 제시하였다. 셀 카운팅은 생물학 또는 병리학적 영상분석에 있어서 매우 중요한 과정이다. 과거에는 셀 카운팅은 수동적인 방법으로 진행되어 매우 지루하고 많은 시간을 필요로 하는 작업이었다. 이에 더하여 수동 계수 방법은 정확한 카운팅 결과를 도출하는데 어려움이 있었다. 따라서, 정확하고 일관된 셀 검출과 카운팅 결과를 생물학적인 영상으로부터 획득하기 위해서는 자동화방법이 필요하다. 제안된 다단계 셀 계수방법은 배양된 세포영상으로부터 셀을 자동으로 분할하고 분할된 셀의 위상학적 분석을 통하여 셀을 라벨링 한다. 셀 카운팅의 정확도를 높이기 위하여 워터쉐드 알고리듬에 의하여 서로 덩어리로 뭉쳐진 셀을 서로 분리하고 모폴로지 연산을 통하여 영상으로부터 획득한 개별 셀의 형태를 개선한다. 제안된 시스템은 모바일 환경에서 사용될 수 있도록 개발되었다. 따라서 셀 영상은 모바일 폰의 카메라로 획득하며 미세세포의 통계학적인 분석 데이터는 유비쿼터스 환경의 모바일 장치에 의해 전송 된다. 실험을 통하여 수동으로 계수한 셀의 숫자와 제안된 방법에 의해 자동 카운팅 된 셀의 수를 비교한 결과 제안된 방법이 매우 효과적이고 정확한 결과를 제시한다는 사실을 입증하였다.

• 대한의용생체공학회:의공학회지
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• 제5권1호
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• pp.69-76
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• 1984

An automatic white blood cell differential counting system was developed, which consists of feature extractor, main control computer, auto focus and search part and data acquisition part. This system is used as a clinical instrument whose purpose is to classify white blood cell images. It may also be used for other binary image processing.

• Transactions on Control, Automation and Systems Engineering
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• 제4권3호
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• pp.224-230
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• 2002

In this paper, a counting algorithm hybridized with an adaptive automatic thresholding method based on Otsu's method and the algorithm that elongates markers obtained by the well-known watershed algorithm is proposed to enhance the exactness of the microcell counting in microscopic images. The proposed counting algorithm can be stated as follows. The transformed full image captured by CCD camera set up at microscope is divided into cropped images of m$\times$n blocks with an appropriate size. The thresholding value of the cropped image is obtained by Otsu's method and the image is transformed into binary image. The microbial cell images below prespecified pixels are regarded as noise and are removed in tile binary image. The smoothing procedure is done by the area opening and the morphological filter. Watershed algorithm and the elongating marker algorithm are applied. By repeating the above stated procedure for m$\times$n blocks, the m$\times$n segmented images are obtained. A superposed image with the size of 640$\times$480 pixels as same as original image is obtained from the m$\times$n segmented block images. By labeling the superposed image, the counting result on the image of microbial cells is achieved. To prove the effectiveness of the proposed mettled in counting the microbial cell on the image, we used Acinetobacter sp., a kind of ammonia-oxidizing bacteria, and compared the proposed method with the global Otsu's method the traditional watershed algorithm based on global thresholding value and human visual method. The result counted by the proposed method shows more approximated result to the human visual counting method than the result counted by any other method.

• Journal of Biosystems Engineering
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• 제38권1호
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• pp.55-63
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• 2013

Purpose: The present study aimed at image processing methods for automatic cell pattern recognition and morphological analysis for tissue engineering applications. The primary aim was to ascertain the novel algorithm of adaptive brightness correction from microscopic images for use as a potential image analysis. Methods: General microscopic image of cells has a minor problem which the central area is brighter than edge-area because of the light source. This may affect serious problems to threshold process for cell-number counting or cell pattern recognition. In order to compensate the problem, we processed to find the central point of brightness and give less weight-value as the distance to centroid. Results: The results presented that microscopic images through the brightness correction were performed clearer than those without brightness compensation. And the classification of mixed cells was performed as well, which is expected to be completed with pattern recognition later. Beside each detection ratio of hBMSCs and HeLa cells was 95% and 92%, respectively. Conclusions: Using this novel algorithm of adaptive brightness correction could control the easier approach to cell pattern recognition and counting cell numbers.

• 정보처리학회논문지:소프트웨어 및 데이터공학
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• 제5권6호
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• pp.267-272
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• 2016

생물정보학분야에서 현미경을 통해 얻은 세포 영상은 생물학적 정보를 얻기 위한 중요한 지표이다. 연구자들은 영상을 육안으로 분석하기 때문에 분석에 많은 시간과 고도의 집중력이 요구된다. 게다가 연구자의 주관적 관점이 분석에 개입되어 결과를 객관적으로 정량화하는데 어려움이 있다. 따라서 본 연구에서는 OpenCV 라이브러리를 이용하여 세포의 자동 분석을 위한 HCS(High Content Screen) 알고리즘을 개발하였다. HCS 알고리즘은 이미지 전처리 과정, 세포 계수, 세포 주기와 분열지수 분석 기능을 포함한다. 본 연구에서는 공초점 레이저 현미경을 통해 얻은 위암세포(MKN-28) 영상을 분석에 사용하였으며, 성능 평가를 위해 세포영상 분석 프로그램인 ImageJ와 전문 연구원의 세포 계수 분석결과를 비교하였다. 실험 결과 HCS 알고리즘의 평균 정확성이 99.7%로 나타났다.

• 한국가시화정보학회지
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• 제19권2호
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• pp.41-47
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• 2021

River and stream are the important water supply source in our lives. Eutrophication causes excessive green algae growth including microcystis, which makes harmful to ecosystem and human health. Therefore, the water purification process to remove green algae is essential. In Korea, green algae alarm system exists depending on the concentration of green algae cells in river or stream. To maintain the growth amount under control, green algae monitoring system is being used. However, the unmanned, small and automatic monitoring system would be preferable. In this study, we developed the 3D printed device to measure the concentration of green algae cell using microfluidic droplet generator and deep learning. Deep learning network was trained by using transfer learning through pre-trained deep learning network. This newly developed microfluidic cell counter has sufficient accuracy to be possibly applicable to green algae alarm system.

• 한국식품위생안전성학회:학술대회논문집
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• 한국식품위생안전성학회 1996년도 제11회 학술대회 및 정기총회 - 식품의 위생 안전성에 관한 최근 연구 동향
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• pp.33-33
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• 1996

Interests in the field of rapid methods and automation in microbiology have been growing steadily on an international scale in recent years. International meetings concerned this problem have been held in elsewhere in the world countries since the past twenty years. But, unfortunately in the field of microbial examination in food hygiene, this problem have not yet been developed so much as in the field of clinical microbiology. Today, I would like to introduce you here present aspects of rapid and automation technologies, those which are manly carrying in milk and meats industries. My illustration will be given recent improved technologies using automatic apparatus and instruments along with process of microbial count procedure. Recent direct microbiological counting system (ChemeScan \ulcorner) as real time ultrasensitive analysis created by Cheminex Ltd., France is now most evolutional instrument to provide direct microbial counts, down to one cell, within 30 minutes. The results from these evaluations how a good correlation between the ChemScan system and the standard plate count method. This system will be successful application for not only in the field of pharmacology but also food microbiology. In addition, current identification of microbes by sophisticated instruments suitable for food microbiology, one of which Biology is manual system (BIOLOG\ulcorner), provides reference-level capability at a modes price. For the manual system, the color reactions in the microplate are read by eye and manually keyed into personal computer. Species identification appears on the computer screen within seconds, along with biotype patterns, a list of closely related species, and other useful statistics. In present this is useful application for microbial ecology and epidemiological survey. RiboPrinter system newly produced by DuPont is now focusing among microbiologists in the world, and is one of the biggest microbial characterization system using a DNA-based approach. The technology analyzer is bacterial culture for its genetic fingerprint or riboprint pattern. Finally Bio-cellTracer system for automatic measurement of fungal growth and Fukitori-Maseter, a Surface Hygiene Monitoring Kit by using swabe procedure in food processing environment are briefly illustrated in this presentation.

• 대한임상검사과학회지
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• 제50권4호
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• pp.399-405
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• 2018

임상검사실에서의 혈소판 수 계산은 지혈이상의 진단과 치료에 필수적이며, 혈소판 수가 적은 경우 혈소판 수혈이 필요하고 항암치료 후 혈소판 수 경과를 모니터링하는데 매우 중요하다. 정도관리는 환자결과를 내보내기 전에 검사실에서 오류를 줄이고 교정하는 과정이며 분절된 적혈구는 혈소판과 크기가 비슷하여 혈소판 수 계산에 영향을 미친다. 검사실에서 내부정도관리low QC물질이 2SD를 벗어난 것을 경험하였고, 지금까지 용혈과 혈소판 지표들과의 관계에 대해 밝혀진 것이 충분하지 않아 연구를 시작하였다. 이에 본 연구에서는 XN CHECK low level QC물질을 이용해 PLT-I, PLT-O, PLT-F 방법간의 혈소판 수치를 비교하였으며, 용혈검체를 만들어 5가지 혈소판지표들에 대해 비교분석 하였다. 그 결과PLT-F방법에서 CV값이 가장 적게 나타났으며, 용혈검체에서 P-LCR 수치가 18.4%에서 31.9%로 증가함을 보였다. 이 연구를 통해 혈소판 수치가 낮은 경우는 PLT-F방법으로 하는 것이 더 정확하며, 검체가 용혈이나 변질이 의심되는 경우 이를 평가할 때 P-LCR을 새로운 지표로 제시하고 있으며, 사람 혈액검체를 이용한 추후 연구가 더 필요할 것이라고 사료된다.