• Title/Summary/Keyword: Value estimation

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A Genome-wide Association Study of Preferred Primal Cuts of Hanwoo Cattle Using Single-step GBLUP (한우 부분육 선호부위에 대한 ssGBLUP을 활용한 GWAS 분석)

  • Lee, Jae Gu;Park, Byoungho;Park, Mi Na;Alam, M.;Kim, Sidong;Do, Changhee;Choi, Tae Jeong
    • Journal of agriculture & life science
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    • v.50 no.3
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    • pp.99-117
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    • 2016
  • Data on primal cuts were collected from 1,829 steers of Hanwoo progeny testing programs, between 2010 and 2015 for the ssGWAS. SNP data were analyzed by using Illumina Bovine 50K Beadchip. The SNP data that matches with phenotype data was 674 animals. As a first step, the genomic estimated breeding value(GEBV) of the loin and rib cuts were estimated, which was used in the estimation of SNP marker effects and their variances related to the traits. Then, the estimated variance explained by each marker was expressed as a proportion to the total genetic variance. Finally, the SNP loci and their significance to any possible QTL were examined. Among the 20 best SNP loci explaining a larger proportion of SNP variance to the total genetic variance for tender loin yield, the region between 12,812,193 ~ 12,922,313bp on BTA 10 harbored a cluster of SNPs that explained about 7.32 to 7.34% of the total genetic variance. For strip loin yield, a peak for higher effects for multiple SNPs was found in BTA24, between 38,158,543 and 38,347,278bp distances, which explained about 8.36 to 8.56% of the observed variance for this trait. For loin yield had relatively smaller effects in terms of the total genetic variance. Therefore, loin yield might be affected by a few loci with moderate effects and many other loci with smaller effects across the genome.

An Analysis on the Preference and Use-Demand Forecasting of Bus Information (버스정보의 선호도 및 이용수요 예측에 관한 연구)

  • Lee, Won Gyu;Jung, Hun Young
    • KSCE Journal of Civil and Environmental Engineering Research
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    • v.28 no.6D
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    • pp.791-799
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    • 2008
  • To build the system which has high utilization and usefulness for users, it is necessary to know the information type and use-demand that the use want. The purpose of this study is to forecast the preference and demand of utilization for bus information when bus information is offered through cellular phon. The accomplishments of this research are as follow : Firstly, importance on the level of individual factor and the value of change's figure can be evaluated, using preference analysis on bus information by conjoint analysis. Secondly, by establishing the use-demand model bus information using binary logit model, influence factor on whether or not the use of the user. Finally, ordered probit model was built by use behavior model in payment per call or per month of potential user of bus information. Through call times and sensitive analysis by payment methods, elasticity point, optimal payment fee, and use probability was analyzed. This study make application as basic to efficient bus information policy and to improve use rate of bus information in future because this study make it possible to get preference analysis, use-demand analysis and estimation of optimal payment fee which is reflecting various requirement in use of bus information user.

Assessment of MODIS Leaf Area Index (LAI) Influence on the Penman-Monteith Evapotranspiration of SLURP Model (MODIS 위성영상으로부터 추출된 엽면적지수(LAI)가 SLURP 모형의 Penman-Monteith 증발산량에 미치는 영향 평가)

  • HA, Rim;SHIN, Hyung-Jin;Park, Geun-Ae;KIM, Seong-Joon
    • KSCE Journal of Civil and Environmental Engineering Research
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    • v.28 no.5B
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    • pp.495-504
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    • 2008
  • Evapotranspiration (ET) is an important state variable while simulating daily streamflow in hydrological models. In the estimation of ET, for example, when using FAO Penman Monteith equation, the LAI (Leaf Area Index) value reflecting the conditions of vegetation generally affects considerably. Recently in evaluating the vegetation condition as a fixed quantity, the remotely sensed LAI from MODIS satellite data is available, and the time series values of spatial LAI coupled with land use classes are utilized for ET evaluation. Four years (2001-2004) of MODIS LAI was prepared for the evaluation of Penman Monteith ET in the continuous hydrological model, SLURP (Semi-distributed Land Use-based Runoff Processes). The model was applied for simulating the dam inflow of Chungju watershed ($6661.3km^2$) located in the upstream of Han river basin. For four years (2001-2004) dam inflow data and meteorological data, the model was calibrated and verified using MODIS LAI data. The average Nash-Sutcliffe model efficiency was 0.66. The 4 years watershed average Penman Monteith ETs of deciduous, coniferous, and mixed forest were 639.1, 422.4, and 631.6 mm for average MODIS LAI values of 3.64, 3.50, and 3.63 respectively.

Influence of Water-Cement Ratios and Curing Conditions on the Diffusion Characteristics of Chloride Ion in Concrete (콘크리트의 염소이온 확산특성에 미치는 물-시멘트비 및 양생조건의 영향)

  • Bae, Su-Ho;Lee, Kwang-Myong;Kim, Jee-Sang;Jung, Sang-Hwa
    • KSCE Journal of Civil and Environmental Engineering Research
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    • v.26 no.4A
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    • pp.753-759
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    • 2006
  • To predict service life of concrete structures exposed to chloride attack, surface chloride concentration, diffusion coefficient of chloride ion, and chloride corrosion threshold value in concrete, are used as important factors. Of these, as the diffusion coefficient of chloride ion for concrete is strongly influenced by concrete quality and environmental conditions of structures and may significantly change the service life of structures, it is considered as the most important factor for service life prediction. The qualitative factors affecting the penetration and diffusion of chloride ion into concrete are water-cement (W/C) ratio, age, curing conditions, chloride ion concentration of given environment, wet and dry conditions, etc. In this paper the influence of W/C ratio and curing conditions on the diffusion characteristics of chloride ion in concrete was investigated through the chloride ion diffusion test. In the test, the voltages passing through the diffusion cell were measured by accelerated test method using potential difference, and then with the consideration of IR drop ratio the diffusion coefficient of chloride ion for concrete with different W/C ratios were estimated by Andrade's model. Furthermore, under different curing conditions formulas for the estimation of the diffusion coefficient of chloride ion have been proposed by the regression analysis considering the effect of W/C ratio and age.

The effect of Photosynthesis, Chlorophyll Fluorescence, and Anti-Oxidation Enzyme Activity on Carbon Dioxide Treatment in Summer Greenhouse Cultivation for Tomato (Solanum Lycopersicum) (여름철 시설 토마토 재배 시 Carbon Dioxide 처리가 광합성, 엽록소 형광, 항산화 효소 발현에 미치는 영향)

  • Woo, Y.H.;Hong, K.H.;Oh, D.G.;Lee, K.H.;Kim, D.E.
    • Journal of Practical Agriculture & Fisheries Research
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    • v.18 no.1
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    • pp.71-78
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    • 2016
  • The present study was performed to examine the high temperature adaptability with CO2 treatment for tomato under the condition of greenhouse cultivation during summer season. The plants with the CO2 concentration of 1000 ppm recorded higher scores in Fm/Fo and Fv/Fm but lower score in Fo than others through the measurement of chlorophyll fluorescence, which implicated that the plants with the CO2 concentration of 1000 ppm had more adaptability to high temperature than the others. At the condition of the same air temperature as 30℃ and 40℃, the photosynthetic rate was increased with the increase of CO2 concentration. When in the high air temperature state of 40℃, although the photosynthic rate was low in comparison with 30℃, its value was about 18.5umolm-2s-1 in case of 1000ppm. The higher concentration of CO2 made the more activated anti-oxidation enzyme (superoxide dismutase and peroxidase) for the both cultivars as 'momotaro' and 'minichal'. The cultivar of 'minichal' performed the high temperature limit as 41℃ at the CO2 condition of 500 ppm and 43℃ at the CO2 condition of 1000 ppm through the estimation on the variation of chlorophyll fluorescence Fo by CO2 concentrations.

Stochastic Self-similarity Analysis and Visualization of Earthquakes on the Korean Peninsula (한반도에서 발생한 지진의 통계적 자기 유사성 분석 및 시각화)

  • JaeMin Hwang;Jiyoung Lim;Hae-Duck J. Jeong
    • KIPS Transactions on Software and Data Engineering
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    • v.12 no.11
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    • pp.493-504
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    • 2023
  • The Republic of Korea is located far from the boundary of the earthquake plate, and the intra-plate earthquake occurring in these areas is generally small in size and less frequent than the interplate earthquake. Nevertheless, as a result of investigating and analyzing earthquakes that occurred on the Korean Peninsula between the past two years and 1904 and earthquakes that occurred after observing recent earthquakes on the Korean Peninsula, it was found that of a magnitude of 9. In this paper, the Korean Peninsula Historical Earthquake Record (2 years to 1904) published by the National Meteorological Research Institute is used to analyze the relationship between earthquakes on the Korean Peninsula and statistical self-similarity. In addition, the problem solved through this paper was the first to investigate the relationship between earthquake data occurring on the Korean Peninsula and statistical self-similarity. As a result of measuring the degree of self-similarity of earthquakes on the Korean Peninsula using three quantitative estimation methods, the self-similarity parameter H value (0.5 < H < 1) was found to be above 0.8 on average, indicating a high degree of self-similarity. And through graph visualization, it can be easily figured out in which region earthquakes occur most often, and it is expected that it can be used in the development of a prediction system that can predict damage in the event of an earthquake in the future and minimize damage to property and people, as well as in earthquake data analysis and modeling research. Based on the findings of this study, the self-similar process is expected to help understand the patterns and statistical characteristics of seismic activities, group and classify similar seismic events, and be used for prediction of seismic activities, seismic risk assessments, and seismic engineering.

Estimation of Carbon Storages and Fluxes by Ecosystem Type in Korea (국내 생태계 유형별 탄소 저장 및 거동 산정 연구 현황 분석)

  • Inyoung Jang;Heon Mo Jeong;Sang-Hak Han;Na-Hyun Ahn;Dukyeop Kim;Sung-Ryong Kang
    • Journal of Wetlands Research
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    • v.25 no.4
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    • pp.417-425
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    • 2023
  • As climate change gets severe, the ecosystem acts as an important carbon sink, therefore efforts are being made to utilize these functions to mitigate climate change. In this study, we inventoried and analyzed the previous studies related to carbon storage and flux by ecosystem type (forest, cropland, wetland, grassland, and settlement) and carbon pool (aboveground and belowground biomass, dead wood, Litter, soil organic carbon, and ecosystem) in Korean ecosystems. We also collected the results of previous studies and calculated the average value of carbon storage and flux for each ecosystem type and carbon pool. As a result, we found that most (66%) of Korea's carbon storage and fluxes studies were conducted in forests. Based on the results of forest studies, we estimated the storage by carbon stock. We found that much carbon is stored in vegetation (aboveground: 4,018.32 gC m-2 and belowground biomass: 4,095.63 gC m-2) and soil (4,159.43 gC m-2). In particular, a large amount of carbon is stored in the forest understory. For other ecosystem types, it was impossible to determine each carbon pool's storage and flux due to data limitations. However, in the case of soil organic carbon storage, the data for forests and grasslands were comparable, showing that both ecosystems store relatively similar amounts of carbon (4,159.43 gC m-2, 4,023.23 gC m-2, respectively). This study confirms the need to study carbon in rather diverse ecosystem types.

Study on the Stability Estimation Method of Small Fishing Vessels at the Initial Design Step (초기설계 단계에서 소형 어선의 복원성 추정 방안에 관한 연구)

  • Hwe-Woo Kim;Sanghyun Kim;Sun-Woo Lee;Hyogeun Lee;In-Tae Kim
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.29 no.7
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    • pp.863-870
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    • 2023
  • Ship capsize accidents are common in coastal waters, particularly involving small fishing boats. To prevent there overturing accidents in small fishing boats, their stabilities must be assessed at the initial design step. However, the available information during the initial design step is limited, posing challenges in performing a reliable stability evaluation. Therefore, this study presents a plan to estimate the transverse metacenter (GM) of small fishing boats using parameters such as KM, KG, and TRIM that can be determined at the initial design step. Stability was evaluated by comparing GM with the minimum transverse metacenter (GMmin) specified in the standard safety evaluation criteria for fishing boats. To calculate the required trim value for hydrostatic characteristics using K-SHIP, a stability assessment program provided by the Korea Maritime Safety and Transportation Corporation, the initial trim state is estimated based on the ship lines using the commercial CFD program STAR-CCM+. GM is then calculated by assessing the hydrostatic characteristics in relation to the boat lines using K-SHIP. Furthermore, the stability of the fully loaded state is compared by subtrcating GM from GMmin. One constructed ship is designated as the standard ship, and the stability assessment method proposed in this study is applied to evaluate stability and validate its effectiveness. Consequently, the representative line of a 4.99-ton fishing boat and nine modular lines models derived from it were evaluated, ultimately identifying a relatively superior stability.

Selection Method for Installation of Reduction Facilities to Prevention of Roe Deer(Capreouls pygargus) Road-kill in Jeju Island (제주도 노루 로드킬 방지를 위한 저감시설 대상지 선정방안 연구)

  • Kim, Min-Ji;Jang, Rae-ik;Yoo, Young-jae;Lee, Jun-Won;Song, Eui-Geun;Oh, Hong-Shik;Sung, Hyun-Chan;Kim, Do-kyung;Jeon, Seong-Woo
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.26 no.5
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    • pp.19-32
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    • 2023
  • The fragmentation of habitats resulting from human activities leads to the isolation of wildlife and it also causes wildlife-vehicle collisions (i.e. Road-kill). In that sense, it is important to predict potential habitats of specific wildlife that causes wildlife-vehicle collisions by considering geographic, environmental and transportation variables. Road-kill, especially by large mammals, threatens human safety as well as financial losses. Therefore, we conducted this study on roe deer (Capreolus pygargus tianschanicus), a large mammal that causes frequently Road-kill in Jeju Island. So, to predict potential wildlife habitats by considering geographic, environmental, and transportation variables for a specific species this study was conducted to identify high-priority restoration sites with both characteristics of potential habitats and road-kill hotspot. we identified high-priority restoration sites that is likely to be potential habitats, and also identified the known location of a Road-kill records. For this purpose, first, we defined the environmental variables and collect the occurrence records of roe deer. After that, the potential habitat map was generated by using Random Forest model. Second, to analyze roadkill hotspots, a kernel density estimation was used to generate a hotspot map. Third, to define high-priority restoration sites, each map was normalized and overlaid. As a result, three northern regions roads and two southern regions roads of Jeju Island were defined as high-priority restoration sites. Regarding Random Forest modeling, in the case of environmental variables, The importace was found to be a lot in the order of distance from the Oreum, elevation, distance from forest edge(outside) and distance from waterbody. The AUC(Area under the curve) value, which means discrimination capacity, was found to be 0.973 and support the statistical accuracy of prediction result. As a result of predicting the habitat of C. pygargus, it was found to be mainly distributed in forests, agricultural lands, and grasslands, indicating that it supported the results of previous studies.

Parameter estimation and assessment of bias in genetic evaluation of carcass traits in Hanwoo cattle using real and simulated data

  • Mohammed Bedhane;Julius van der Werf;Sara de las Heras-Saldana;Leland Ackerson IV;Dajeong Lim;Byoungho Park;Mi Na Park;Seunghee Roh;Samuel Clark
    • Journal of Animal Science and Technology
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    • v.65 no.6
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    • pp.1180-1193
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    • 2023
  • Most carcass and meat quality traits are moderate to highly heritable, indicating that they can be improved through selection. Genetic evaluation for these types of traits is performed using performance data obtained from commercial and progeny testing evaluation. The performance data from commercial farms are available in large volume, however, some drawbacks have been observed. The drawback of the commercial data is mainly due to sorting of animals based on live weight prior to slaughter, and this could lead to bias in the genetic evaluation of later measured traits such as carcass traits. The current study has two components to address the drawback of the commercial data. The first component of the study aimed to estimate genetic parameters for carcass and meat quality traits in Korean Hanwoo cattle using a large sample size of industry-based carcass performance records (n = 469,002). The second component of the study aimed to describe the impact of sorting animals into different contemporary groups based on an early measured trait and then examine the effect on the genetic evaluation of subsequently measured traits. To demonstrate our objectives, we used real performance data to estimate genetic parameters and simulated data was used to assess the bias in genetic evaluation. The results of our first study showed that commercial data obtained from slaughterhouses is a potential source of carcass performance data and useful for genetic evaluation of carcass traits to improve beef cattle performance. However, we observed some harvesting effect which leads to bias in genetic evaluation of carcass traits. This is mainly due to the selection of animal based on their body weight before arrival to slaughterhouse. Overall, the non-random allocation of animals into a contemporary group leads to a biased estimated breeding value in genetic evaluation, the severity of which increases when the evaluation traits are highly correlated.