• Title/Summary/Keyword: Unrecorded Species

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New Records of Genus Dinophysis, Gonyaulax, Amphidinium, Heterocapsa (Dinophyceae) from Korean Waters

  • Kang, Su-Min;Lee, Joon-Baek
    • Korean Journal of Environmental Biology
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    • v.36 no.3
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    • pp.260-270
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    • 2018
  • A study describing unrecorded and taxonomically undescribed indigenous species is in progress since 2006. Samples were collected from many sites in coastal waters and offshore of Korea as well as from Jeju Island. Since 2008, we have found ten unrecorded species of four genera belonging to family Dinophysaceae, Gonyaulacaceae, Gymnodiniaceae, and Heterocapsaceae. The species are as follows, Dinophysis elongata (2016 winter), D. nasuta (2016 winter), Gonyaulax alaskensis (2016 winter), G. diegensis (2017), G. monospina (2008), Amphidinium flagellans(2017), Heterocapsa circularisquama (2017), H. horiguchii (2017), H. lanceolata (2017), and H. pygmaea (2017) (note; The numbers in the parenthesis refer to the year in which the species was reported as unrecorded indigenous species by National Institute of Biological Resources, NIBR hereafter). Among them, seven species were described as newly recorded species in Korean waters, and three have been re-described in this study.

Unrecorded species of Korean protozoans discovered through the project of 'Discovery of Korean Indigenous Species' III

  • Kyu-Seok Chae;Kang-San Kim;Jongwoo Jung;Gi-Sik Min
    • Journal of Species Research
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    • v.12 no.4
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    • pp.355-361
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    • 2023
  • In this paper, we present unrecorded protozoans of Korea that were discovered, through the 'Discovery of Korean Indigenous Species' project hosted by the 'National Institute of Biological Resources (NIBR)'. A taxonomic account is provided for each identified species, offering comprehensive information such as species name, Korean name, collection site, synonyms, specimen vouchers, diagnoses, and figures. This study introduces 13 previously unrecorded Korean protozoan species that are classified into three phyla: Amoebozoa, Cercozoa, and Ciliophora. Notably, the cercozoan family Chlamydophryidae was recorded in Korea for the first time, together with the discovery of three previously unreported genera: Diaphoropodon within Cercozoa, and Metauroleptus and Hemicycliostyla within Ciliophora.

A report of six unrecorded bacterial species isolated from soil samples in Korea

  • Da Som Kim;Mi Jin Jeon;Won-Jae Chi
    • Journal of Species Research
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    • v.13 no.1
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    • pp.61-66
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    • 2024
  • During an investigation of unrecorded prokaryotic species in Korea, six unrecorded bacterial strains were isolated from soil samples collected from Uljin-gun. Based on a similarity search using the 16S rRNA gene sequence of the isolated strains and the construction of the neighbor-joining phylogenetic tree, five strains were identified to the genus Pseudomonas of the family Pseudomonadaceae, while one strain was identified as a species belonging to the genus Paenibacillus of the family Paenibacillaceae. The details of these unreported species, including gram staining reaction, colony and cell morphology, basic biochemical characteristics, strain ID, and isolation source, are described in the description of the strains.

Description of 17 unrecorded bacterial species isolated from freshwater showing antibiotic resistance in Korea

  • Baek, Kiwoon;Kim, Eui-Jin;Han, Ji-Hye;Choi, Ahyoung
    • Korean Journal of Environmental Biology
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    • v.38 no.2
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    • pp.289-298
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    • 2020
  • As part of the research program "2018 Rapid screening and identification of freshwater microorganisms using MALDI-TOF/MS library" freshwater samples were collected from a branch of the Nakdong River. Almost 300 antibiotic-resistant bacterial strains were isolated from freshwater samples and subsequently identified by 16S rRNA gene sequencing. Seventeen strains among the isolates shared high 16S rRNA gene sequence similarity (>99.0%) with known species that were not previously recorded in Korea, and each of the isolates also formed a robust phylogenetic clade with the closest species. These species were phylogenetically diverse, belonging to four phyla, seven classes, 10 orders, and 13 genera. At the genus and class level, the previously unrecorded species belonged to Rhodovarius, Xanthobacter, and Shinella of the class Alphaproteobacteria; Ottowia, Simplicispira, and Zoogloea of Betaproteobacteria; Pseudomonas, Acinetobacter, and Shewanella of Gammaproteobacteria; Arcobacter of Epsilonproteobacteria; Sphingobacterium of Sphingobacteriia; Trichococcus of Bacilli; and Leucobacter of Actinobacteria. The previously unrecorded species were further characterized by examining their gram-staining, colony and cell morphology, biochemical properties, and phylogenetic position.

Eight unrecorded bacterial species isolated from soil and marine sediment in Korea

  • Kim, Minji;Lee, Ki-Eun;Cha, In-Tae;Lee, Byoung-Hee;Park, Soo-Je
    • Journal of Species Research
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    • v.9 no.4
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    • pp.339-345
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    • 2020
  • The Earth contains billions of microbial species, although the vast majority cannot be cultured in laboratories and are thus considered unidentified and uncharacterized. Extremophiles are microorganisms that thrive in extreme conditions, including temperature, salinity, and pH. Extremophilic microorganisms have provided important insights for biological, metabolic, and evolutionary studies. Between 2017 and 2019, as part of a comprehensive investigation to identify bacterial species in Korea, eight bacterial strains were isolated from marine and non-marine environments in Jeju Island. These strains were cultured under extreme salinity or pH conditions. Phylogenetic analysis using 16S ribosomal RNA(rRNA) gene sequencing indicated that all eight strains belonged to the phyla Gammaproteobacteria, Bacilli, and Alphaproteobacteria. Based on their high 16S rRNA gene sequence similarities(>98.7%) and the formation of strong monophyletic clades with their closest related species, all isolated strains were considered as an unrecorded strain, previously unidentified species. Gram stain reaction, culture conditions, colony and cell morphology, biochemical characteristics, isolation source, and National Institute of Biological Resources(NIBR) IDs are described in this article. The characterization of these unrecorded strains provides information on microorganisms living in Korea.

New Records of Dinoflagellates in Five Genera of Peridiniales (Dinophyceae) from Korean Waters

  • Lee, Joon-Baek;Kang, Su-Min
    • Korean Journal of Environmental Biology
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    • v.35 no.3
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    • pp.251-264
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    • 2017
  • A study searching for unrecorded and taxonomically undescribed indigenous species has been conducted since 2006. Samples were collected from many sites in coastal waters and offshore in Korea as well as around Jeju Island. Since 2008 we have found 13 unrecorded species belonging to family Diplopsaliaceae, Heterocapsaceae, Kolkwitziellaceae, Protoperidiniaceae and Thoracosphaeraceae. The species are as follows, Preperidinium meunieri (2014), Heterocapsa ovata (2015), H. pseudotriquetra (2015), Diplopsalis lenticula (2008), Protoperidinium abei (2009), P. diabolus var. longipes (2010), P. depressum (synonym: P. parallelum (2008)), P. latispinum (2016), P. punctulatum (2010), P. solidicorne (synonym: P. spinosum (2010)), P. subpyriforme (2010), P. pacificum (2013), Scrippsiella hexapraecingula (2009) (note; The numbers in parenthesis refer to the year that the species was reported as unrecorded indigenous species by National Institute of Biological Resources, NIBR hereafter). Among these, 5 species were described as newly recorded species in Korean waters, and 8 were re-described in this study.

Four Unrecorded Aspergillus Species from the Rhizosphere Soil in South Korea

  • Lee, Jun Won;Kim, Sung Hyun;You, Young-Hyun;Lim, Young Woon;Park, Myung Soo
    • Mycobiology
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    • v.49 no.4
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    • pp.346-354
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    • 2021
  • The genus Aspergillus is commonly isolated from various marine and terrestrial environments; however, only a few species have been studied in rhizosphere soil. As part of the Korean indigenous fungal excavation project, we investigated fungal diversity from rhizosphere soil, focusing on Aspergillus species. A total of 13 strains were isolated from the rhizosphere soil of three different plants. Based on phylogenetic analysis of β-tubulin and calmodulin and morphological characteristics, we identified five Aspergillus species. A. calidoustus and A. pseudodeflectus were commonly isolated from the rhizosphere soil. Four species were confirmed as unrecorded species in Korea: A. calidoustus, A. dimorphicus, A. germanicus, and A. pseudodeflecuts. The detailed morphological descriptions of these unrecorded species are provided.

Isolation and characterization of unrecorded yeast species from Korea in the families Debaryomycetaceae and Piskurozymaceae

  • Lee, Sang Eun;Oh, Hye Jin;Kim, Myung Kyum
    • Journal of Species Research
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    • v.10 no.4
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    • pp.344-349
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    • 2021
  • The purpose of this study was to isolate and identify wild yeasts from soil of Gyeongju city, and Haemadipsa rjukjuana of Gageodo Island, characterizing unrecorded yeast strains from Korea. The molecular analysis of the D1/D2 domain of 26S rDNA of yeast was performed using the Basic Local Alignment Search Tool (BLAST). No official report exists describing these three species: one species in the genus Candida, one species in the genus Debaryomyces, and one species in the genus Solicoccozyma. Candida saitoana YL9, Debaryomyces fabryi YL1, and Solicoccozyma terrea 20g9-1 are recorded for the first time from Korea. All three strains were oval shaped and polar binding, while positive for glucose, ᴅ-xylose, and ᴅ-cellobiose. Morphological, physiological, and biochemical properties are described in the species descriptions.