• Title/Summary/Keyword: Total fungi

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Cryptococcal Brainstem Abscess Mimicking Brain Tumors in an Immunocompetent Patient

  • Hur, Jong Hee;Kim, Jang-Hee;Park, Seoung Woo;Cho, Kyung Gi
    • Journal of Korean Neurosurgical Society
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    • v.57 no.1
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    • pp.50-53
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    • 2015
  • Usually fungal infections caused by opportunistic and pathogenic fungi had been an important cause of morbidity and mortality among immunocompromised patients. However clinical data and investigations for immunocompetent pathogenic fungal infections had been rare and neglected into clinical studies. Especially Cryptococcal brainstem abscess cases mimicking brain tumors were also much more rare. So we report this unusual case. This 47-year-old man presented with a history of progressively worsening headache and nausea for 1 month and several days of vomituritions before admission. Neurological and laboratory examinations performed demonstrated no abnormal findings. Previously he was healthy and did not have any significant medical illnesses. A CT and MRI scan revealed enhancing $1.8{\times}1.7{\times}2.0$ cm mass lesion in the left pons having central necrosis and peripheral edema compressing the fourth ventricle. And also positron emission tomogram scan demonstrated a hot uptake of fluoro-deoxy-glucose on the brainstem lesion without any evidences of systemic metastasis. Gross total mass resection was achieved with lateral suboccipital approach with neuronavigation system. Postoperatively he recovered without any neurological deficits. Pathologic report confirmed Cryptococcus neoformans and he was successively treated with antifungal medications. This is a previously unreported rare case of brainstem Cryptococcal abscess mimicking brain tumors in immunocompetent host without having any apparent typical meningeal symptoms and signs with resultant good neurosurgical recovery.

Bioconversion of Straw into Improved Fodder: Fungal Flora Decomposing Rice Straw

  • Helal, G.A.
    • Mycobiology
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    • v.33 no.3
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    • pp.150-157
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    • 2005
  • The fungal flora decomposing rice straw were investigated all over the soil of Sharkia Province, east of Nile Delta, Egypt, using the nylon net bag technique. Sixty-four straw-decomposing species belonging to 30 genera were isolated by the dilution plate method in ground rice straw-Czapek's agar medium at pH 6. The plates were incubated separately at $5^{\circ}C,\;25^{\circ}C\;and\;45^{\circ}C$, respectively. Twenty nine species belonging to 14 genera were isolated at $5^{\circ}C$. The most frequent genus was Penicillium (seven species), and the next frequent genera were Acremonium (three species), Fusarium (three species), Alternaria, Chaetomium, Cladosporium, Mucor, Stachybotrys (two species) and Rhizopus stolonifer. At $25^{\circ}C$, 47 species belonging to 24 genera were isolated. The most frequent genus was Aspergillus (nine species), and the next frequent genera were ranked by Penicillium (five species), Chaetomium (three species), Fusarium (three species). Each of Alternaria, Cladosporium, Mucor, Myrothecium and Trichoderma was represented by two species. At $45^{\circ}C$, 15 species belonging to seven genera were isolated. These were seven species of Aspergillus, two species of Chaetomium and two species of Emericella, while Humicola, Malbranchea, Rhizomucor and Talaromyces were represented by one species respectively. The total counts of fungi the genera, and species per gram of dry straw were significantly affected by incubation temperature and soil analysis (P < 0.05).

Molecular detection of infectious pathogens in honeybee colonies reared in eastern Gyeongbuk province, Korea (경북 동부지역 꿀벌에서 주요 병원체의 분자생물학적 검출)

  • Ouh, In-Ohk;Do, Jae-Cheul;Seo, Min-Goo;Jeong, Tae-Nam;Cho, Min-Hee;Kwak, Dong-Mi
    • Korean Journal of Veterinary Service
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    • v.36 no.1
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    • pp.37-44
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    • 2013
  • The ecologically and economically important honeybee species are susceptible to infections by various pathogens. This study was investigated to detect infectious pathogens in honeybee colonies reared in eastern Gyeongbuk province by PCR in 2010~2011. A total of 11 infectious pathogens, including 6 viruses, 2 bacteria, 2 fungi, and 1 parasite, were investigated in honeybee colonies suffering from symptoms of sudden collapse, depopulation, or paralysis. The infectious pathogens and infection rates among 24 honeybee colonies detected were as follows: sacbrood virus (66.7%), deformed wing virus (4.2%), black queen cell virus (12.5%), Kashmir bee virus (29.2%), American foulbrood (41.7%), European foulbrood (12.5%), stonebrood (45.8%), chalkbrood (4.2%), and Nosema (33.3%), respectively. Since the coinfection rates of multiple pathogens were detected high in honeybee colonies reared in eastern Gyeongbuk province, large-scale investigation and appropriate control programs need to be established in this region.

Estimation of micro-biota in the Upo wetland using eukaryotic barcode molecular markers

  • Park, Hyun-Chul;Bae, Chang-Hwan;Jun, Ju-Min;Kwak, Myoung-Hai
    • Journal of Ecology and Environment
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    • v.34 no.3
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    • pp.323-331
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    • 2011
  • Biodiversity and the community composition of micro-eukaryotic organisms were investigated in the Upo wetland in Korea using molecular analysis. Molecular identification was performed using cytochrome oxidase I (COI) and small subunit ribosomal DNA (SSU rDNA). The genomic DNA was isolated directly from soil samples. The COI and SSU rDNA regions were amplified using universal primers and then sequenced after cloning. In a similarity search of the obtained sequences with BLAST in the Genbank database, the closely related sequences from NCBI were used to identify the amplified sequences. A total of six eukaryotic groups (Annelida, Arthropoda, Rotifera, Chlorophyta, Bacillariophyta, and Stramenopiles) with COI and six groups (Annelida, Arthropoda, Rotifera, Alveolata, Fungi, and Apicomplexa) with SSU rDNA genes were determined in the Upo wetland. Among 38 taxa in 20 genera, which are closely related to the amplified sequences, 10 genera (50%) were newly reported in Korea and five genera (25%) were shown to be distributed in the Upo wetland. This approach is applicable to the development of an efficient method for monitoring biodiversity without traditional taxonomic processes and is expected to produce more accurate results in depositing molecular barcode data in the near future.

Quality Characteristics of Low-Salt Gochujang Added with Glycyrrhiza uralensis and Brassica juncea

  • Lee, So-Young;Park, So-Lim;Yi, Sung-Hun;Nam, Young-Do;Lim, Seong-Il
    • Preventive Nutrition and Food Science
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    • v.16 no.4
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    • pp.348-356
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    • 2011
  • The effects of Glycyrrhiza uralensis and Brassica juncea on the quality and palatability of low-salt gochujang were investigated in terms of the microbial characteristics, enzyme activities, pH, acidity, amino nitrogen and sensory evaluation during 40 days of fermentation. The proliferation of fungi in low-salt gochujang with added G. uralensis and B. juncea were inhibited, while the numbers of total viable bacteria and lactic acid bacteria were not affected. In terms of ${\alpha}$-amylase and ${\beta}$-amylase activity, no significant difference was observed by the salt concentration or additives. However, lowering the salt concentration increased protease activity. The amount of amino-nitrogen in low-salt gochujang at 20 days was similar to that in the control gochujang at 40 days. In the sensory test, low-salt gochujang was preferred compared to control gochujang (8.5% salt). Particularly, the 4.3% salt gochujang with additives was the most preferred.

Studies on the Constituents of Korean Higher Fungi (III) -Alkaloids of Korean Ergots- (한국산(韓國産) 고등균류(高等菌類)의 성분연구(成分硏究)(III) -한국산(韓國産) 맥각(麥角)의 Alkaloid 성분(成分)-)

  • Kim, Byong-Kak;Hwang, Sung-Hyun;Auck, Sun;Lee, Eung-Kwon
    • Korean Journal of Pharmacognosy
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    • v.4 no.1
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    • pp.23-27
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    • 1973
  • Korean ergot sclerotia which were collected from Agropyron semicostatum $N_{EES}$, Miscanthus sinensis $A_NDERS$ var. purpurascens $R_{END}$, M. sacchariflorus $B_{ENTH}$. et HOOK,. M. sinensis $A_{NDERS}$., Eulalia speciosa $O.{\;}K_{UNTZ}$, Themeda triandra $F_{ORSK}$. var. japonica $M_{AKINO}$, and Phalaris arundinacea L. were investigated for their alkaloid constituents. Quantitative determinations of alkaloids were carried out using a modified procedure of van $U_{RK}$ and $M_{ICHELON}-K_{ELLEHER}$ methods. The results showed that the two ergots from Agropyron semicostatum and Phalaris arundinacea contained total alkaloids up to 0.137 per cent. The alkaloids of these two ergots are mostly water-insoluble alkaloids. The ergots parasitizing Reed Canary grass was found to contain both water-soluble and water-insoluble alkaloids. The TLC and PPC tests for the ergot alkaloids from Agropyron semicostatum and Phalaris arundinacea revealed that they contain at least two alkaloids, respectively, and that the ergot from Themeda triandra $F_{ORSK}$. var. japonica has one. The lipid contents of the seven ergots ranged from 13 to 29 per cent.

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The Nutrients and Microbial Properties of Animal Manure and Spent Mushroom Compost Tea and the Effect of Growth of Lettuce (Lactuca sativa L.) (가축분뇨와 폐버섯 퇴비차의 양분 및 미생물적 특성과 상추의 생육에 미치는 영향)

  • Ryoo, Jong-Won
    • Korean Journal of Organic Agriculture
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    • v.19 no.4
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    • pp.589-602
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    • 2011
  • In this study, experiments were conducted to determine the effect of different compost teas on plant growth reponses and yield of leaf lettuce. Compost tea is a liquid extract of compost obtained by mixing compost and water for a defined period of time. The pig manure and spent mushroom compost were made by steeping compost in water. Compost tea was aerated from 24 hours and molasses and kelp were added as supplements. The four types of compost were tested growth of lettuce. EC of animal manure compost tea was higher than that of spent mushroom compost tea. Mineral nutrients were significantly higher in animal manure compost tea compared with spent mushroom compost tea. Compost tea contains nutrient and a ranges of different organisms. The beneficial fungi and actinomycetes were prominent in a spent mushroom compost tea. Compost tea from animal manure had the higher numbers of total bacteria. The actinomycetes densities were high in spent mushroom compost tea. But actinomycetes were not founded in animal manure compost tea. The growth characteristics of lettuce in animal manure compost tea were higher than those of spent mushroom compost tea. And also SPAD value in leaf was high in plot treated with animal manure compost tea. The fresh yield of lettuce in animal compost tea was higher by 181% that of control plot. The effect of compost tea on growth of lettuce was largely attributable to mineral nutrient.

Higher Fungi of Cheju-do(1) - Unrecorded mushrooms - (제주도의 고등균류(1) - 미기록종 버섯 -)

  • Lee, Jeong-Bae;Oh, Duck-Chul
    • The Korean Journal of Mycology
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    • v.26 no.4 s.87
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    • pp.538-550
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    • 1998
  • The mushrooms of this study were collected mainly on Mt. Halla on Cheju-do from April of 1995 to October of 1997. A total of 292 species from 127 genera were identified. Among them, 103 species from 41 genera of the Basidiomycota and 88 species from 13 genera of the Ascomycota were recorded for the first time on Cheju-do. Five species were recorded for the first time in Korea. They are: Typhula phacorriza, Cordyceps crinalis, Cordyceps cochlidiicola, Cordyceps longissima and Cordyceps prolifica.

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Fungal Flora of Mt. Paekwoon(I) (백운산지역(白雲山地域)의 고등균류(高等菌類)(I))

  • Seok, Soon Ja;Kim, Yang Sup;Lee, Kyung Joon
    • Journal of Korean Society of Forest Science
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    • v.83 no.4
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    • pp.556-562
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    • 1994
  • To investigate the fungal diversity in Mt. Paekwoon, higher fungi were collected in July, 1991 from the two locations of Seoul National University Forests in Kwangyang-gun, Chonnam Province. A total of 137 fungal species were collected and classified. Following six species were identified as new species unrecorded in Korea. Their morphological and taxonomic features including microscopic characteristics of spores and cystidia were also reported in this paper. Marasmius pulcherripes Peck ; Agaricus purpurellus(Moller) Moller ; Coprinus echinosporus Buller ; Xerocomus nigromaculatus Hongo ; Boletellus shichianus(Teng & Ling) Teng ; Russula kansaiensis Hongo.

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Genetic Mapping of Resistant Genes in Brassica pekinensis Against Plasmodiophora brassicae Race 6

  • Lee, Gung-Pyo;Baek, Nam-Kwon;Park, Kuen-Woo
    • The Plant Pathology Journal
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    • v.18 no.5
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    • pp.266-270
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    • 2002
  • Inbred lines of Chinese cabbage KU-101 (resistant line against Plasmodiophora brassicae race race 6) and CS-113 (susceptible line) were crossed and their progeny lines F$_1$, BC$_1$F$_1$, F$_2$, and F$_3$ were produced for the construction of the genetic linkage map of R brassicae race 6-resistant Brassica campestris ssp. pekinensis genome. Restriction fragment length polymorphism (RFLP) was applied to compare between parents and their f$_2$ progenies with a total of 192 probes and 5 restriction enzymes. The constructed RFLP map covered 1,104 cM with a mean distance between genetic marker of 8.0 cM, and produced 10 linkage groups having 121 genetic loci. The loci of P. brassicae race 6 (CR6)-resistant Brassica genome were determined by interval mapping of quan-titative trait loci (QTL), which resulted from bioassay using the same race of the fungi in P3 population. Resistant loci were estimated in numbers 1 (Gl) and 3 (G3) linkage groups. In the regression test, Gl had a value of4.8 logarithm of odd (LOD) score, while C3 had values of 4.2-7.2. Given these results, the location of the CR6-resistant loci within the Brassica genome map can now be addressed.