• Laser Solutions
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• v.12 no.2
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• pp.17-25
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• 2009

Two methodologies for predicting thermal relaxation time of tissue subjected to pulsed laser irradiation is introduced by the calculation the optical penetration depth and by the investigation of the temperature diffusion behavior. First approach is that both x-axial and y-axial thermal relaxation times are predicted and they are superposed to achieve the thermal relaxation time (${\tau}_1$) for two-dimensional square tissue model. Another approach to achieve thermal relaxation time (${\tau}_2$) is measuring the time required for local temperature drop until $e^{-1}$ of the maximum laser induced heating.

• Applied Microscopy
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• v.35 no.1
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• pp.1-13
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• 2005

Fine photographs are essential in the electron microscopy. Artifacts can be introduced during all steps of electron microscopy; specimen processing, observation and printing. Every caution is necessary to avoid the artifact formation. In this review, the authors discussed the causes of various artifacts and suggested the solution to help the correct tissue handling and electron microscopic observations.

• Proceedings of the Korea Information Processing Society Conference
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• 2010.04a
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• pp.455-458
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• 2010

Extracting the brain from magnetic resonance imaging head scans is an essential preprocessing step of which the accuracy greatly affects subsequent image analysis. The currently popular Brain Extraction Tool produces a brain mask which may be too smooth for practical use to reduce the accuracy. This paper presents a novel and indirect brain extraction method based on non-brain tissue segmentation. Based on ITK, the proposed method allows a non-brain contour by using region growing to match with the original image naturally and extract the brain tissue. Experiments on two set of MRI data and 2D brain image in horizontal plane and 3D brain model indicate successful extraction of brain tissue from a head.

• Journal of Biomedical Engineering Research
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• v.5 no.1
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• pp.39-46
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• 1984

In order to improve the performance of ultrasonic diagnostic equipment, it is important to development the signal processing considering the ultrasonic properties of biological medium and propagation mechanism in tissue. Attenuation coefficient is not only important factor to analyze propagation properties, but also it is significant to estimate it in view of tissue characterization, so we show one of the method to estimate attenuation coefficient of biological tissue and the results of estimation.

• Journal of Institute of Control, Robotics and Systems
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• v.10 no.3
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• pp.239-248
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• 2004

Optical coherence tomography(OCT) is high resolution imaging system which can see the cross section of microscopic organs in the living tissue. In this paper, we analyze the relation between the light source and the resolution of modulated signal in Michelson interferometer. We construct 1-D OCT signal processing hardware such as amplifiers, filters, and demodulate electronic signals from the photo detector. In order to get 2-D OCT image, the synchronization among optical delay line, sample stage and A/D converter is dealt with. In experiments, we verify analog and digital signal processing blocks which apply to the stacks of glasses. Finally we aquire high resolution 2-D OCT image with respect to the onion tissue. We expect that this result can be applied to the medical instrument through performance improvement.

• Maxillofacial Plastic and Reconstructive Surgery
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• v.29 no.4
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• pp.366-371
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• 2007

Evaluation of the methods of processing allogenic bone must be considered in order to make an effective choice of graft materials in oral surgery. Allograft materials processed by the tissue banking industry have varying capacities of bone reconstruction. The biological function of processed bone can be affected by many factors, like particle size, processing parameters, and inclusion or exclusion of mineral and moisture. For example, freeze drying step offers a safe and economical means for packaging, shipping, storage, and preservation of homologous bone. Demineralization of cortical bone using hydrochloric acid can produce a uniform demineralized surface with a capacity for osteoinduction. The objectives of this review were to evaluate the processing methods for allogenic bone and to characterize processed materials for grafting. It is important to understand the biological, biomechanical healing of different types of allografts to make the right choice for allogenic bone on each clinical application and to achieve a successful outcome for alveolar bone reconstruction in oral surgery.

• Mass Spectrometry Letters
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• v.5 no.1
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• pp.16-23
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• 2014

Liquid chromatography based mass spectrometry (LC-MS) is a key technology for analyzing highly complex and dynamic proteome samples. With highly accurate and sensitive LC-MS analysis of complex proteome samples, efficient data processing is another critical issue to obtain more information from LC-MS data. A typical proteomic data processing starts with protein database search engine which assigns peptide sequences to MS/MS spectra and finds proteins. Although several search engines, such as SEQUEST and MASCOT, have been widely used, there is no unique standard way to interpret MS/MS spectra of peptides. Each search engine has pros and cons depending on types of mass spectrometers and physicochemical properties of peptides. In this study, we describe a novel data process pipeline which identifies more peptides and proteins by correcting precursor ion mass numbers and unifying multi search engines results. The pipeline utilizes two open-source software, iPE-MMR for mass number correction, and iProphet to combine several search results. The integrated pipeline identified 25% more proteins in mouse epididymal adipose tissue compared with the conventional method. Also the pipeline was validated using control and colitis induced colon tissue. The results of the present study shows that the integrated pipeline can efficiently identify increased number of proteins compared to the conventional method which can be a breakthrough in identification of a potential biomarker candidate.

• Journal of the Institute of Convergence Signal Processing
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• v.13 no.2
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• pp.70-76
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• 2012

In this paper, an automatic extraction method of glomerulus region from human renal tissue image is presented. The important information reflecting the state of kidneys richly included in the glomeruli, so it should be the first step to extract the glomerulus region from the renal tissue image for the further quantitative analysis of the renal condition. Especially, there is no clear difference between the glomerulus and other tissues, so the glomerulus region can not be easily extracted from its background by the existing segmentation methods. The outer edge of a glomerulus region is regarded as a common property for the regions of this kind ; a two- dimensional Gaussian distribution is used to convolve with an original image first and then the image is thresholded at this blurred image ; a closed curve corresponding to the outer edge can be obtained by usual pattern processing skills like thinning, branch-cutting, hole-filling etc., Finally, the glomerulus region can be obtained by extracting the area in the original image surrounded by the closed curve. The glomerulus regions are correctly extracted by 85 percentages and experimental results show the proposed method is effective.

• Proceedings of the KIEE Conference
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• 1988.07a
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• pp.720-722
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• 1988

The Diagnostic applications of Ultrasound are developed in many ways. In this paper, We measure the attenuation coeffient of biological tissue using DSP. This method is useful in tissue characterization with real time. In the future, We expect that this method coupling with the ultrasonic temperature dependence of biological tissue also is applied to hyperthermia.

• Journal of Biomedical Engineering Research
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• v.14 no.3
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• pp.273-282
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• 1993

This study is concerned with the temperature dependence characteristics of ultrasound parameters in biological tissues, which are basic on the noninvasive deep body temperature estimation. Used parameters are ultrasonic attenuation coefficient and sound velocity In order to accomplishment our purpose, several signal processing methods were used. Attenua4iorl coefficient was estimated by spectral difference method and sound velocity was estimated by P-P method. And we also examined these methods through a series of IN VITRO experi mentis that used tissue-mimicking phantom samples and biological tissue samples. In order to imitate the biological soft tissue two kinds of phantom samples are used, one is agar phantom sample which is composed of agar, graphite, N-propyl alcohol and distilled water, and the other is fat phantom sample which is composed of pure animal fat. And the ultrasound transmission mode and reflection mode experiments are performed on the pig's spleen, kidney and fat. As a result, it is found that the temperature characteristics are uniform in case of phan- tom samples but not in biological tissues because of complicate wave propagation within them. Consequently, the possibility of temperature measurement using ultrasound on biological tissue is confirmed and its results may contribute to the establishment of reference values of internal temperature measurement of biological tissues.