• Title/Summary/Keyword: Structural activity

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Altered sugar donor specificity and catalytic activity of pteridine glycosyltransferases by domain swapping or site-directed mutagenesis

  • Kim, Hye-Lim;Kim, Ae Hyun;Park, Mi Bi;Lee, Soo-Woong;Park, Young Shik
    • BMB Reports
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    • v.46 no.1
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    • pp.37-40
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    • 2013
  • CY-007 and CY-049 pteridine glycosyltransferases (PGTs) that differ in sugar donor specificity to catalyze either glucose or xylose transfer to tetrahydrobiopterin were studied here to uncover the structural determinants necessary for the specificity. The importance of the C-terminal domain and its residues 218 and 258 that are different between the two PGTs was assessed via structure-guided domain swapping or single and dual amino acid substitutions. Catalytic activity and selectivity were altered in all the mutants (2 chimeric and 6 substitution) to accept both UDP-glucose and UDP-xylose. In addition, the wild type activities were improved 1.6-4.2 fold in 4 substitution mutants and activity was observed towards another substrate UDP-N-acetylglucosamine in all the substitution mutants from CY-007 PGT. The results strongly support essential role of the C-terminal domain and the two residues for catalysis as well as sugar donor specificity, bringing insight into the structural features of the PGTs.

Production, Structural Elucidation, and In Vitro Antitumor Activity of Trehalose Lipid Biosurfactant from Nocardia farcinica Strain

  • Christova, Nelly;Lang, Siegmund;Wray, Victor;Kaloyanov, Kaloyan;Konstantinov, Spiro;Stoineva, Ivanka
    • Journal of Microbiology and Biotechnology
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    • v.25 no.4
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    • pp.439-447
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    • 2015
  • The objective of this study was to isolate and identify the chemical structure of a biosurfactant produced by Nocardia farcinica strain BN26 isolated from soil, and evaluate its in vitro antitumor activity on a panel of human cancer cell lines. Strain BN26 was found to produce glycolipid biosurfactant on n-hexadecane as the sole carbon source. The biosurfactant was purified using medium-pressure liquid chromatography and characterized as trehalose lipid tetraester (THL) by nuclear magnetic resonance spectroscopy and mass spectrometry. Subsequently, the cytotoxic effects of THL on cancer cell lines BV-173, KE-37 (SKW-3), HL-60, HL-60/DOX, and JMSU-1 were evaluated by MTT assay. It was shown that THL exerted concentration-dependent antiproliferative activity against the human tumor cell lines and mediated cell death by the induction of partial oligonucleosomal DNA fragmentation. These findings suggest that THL could be of potential to apply in biomedicine as a therapeutic agent.

Path analysis for academic self-efficacy, the motivation and learning attitude on the learning through game making activity (게임 제작을 통한 학습에서 학업적 자기효능감, 학습동기 및 학습태도에 대한 경로분석)

  • Park, Hyung-Sung
    • Journal of The Korean Association of Information Education
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    • v.16 no.1
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    • pp.33-40
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    • 2012
  • The purpose of this study is to find the relationship of academic self-efficacy, motivation, computer learning attitudes on the learning through game making activity. Through this study, it was confirmed structural relationship of the variables for learner's participant and academic goal achievement in learning with digital games. The structural equating model in this study, also indicates that academic self-efficacy, which was consisting of assignment level, self-efficacy, confidence affects meaningfully on motivation and computer learning attitudes. It is important factor that Learner's attitudes for the task and regulate of learning process in learning with digital games, which was focused on learning by doing.

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FACTORS ACOUNTING FOR ACTIVITY-TIME AND PROJECT-TIME UNCERTAINITIES IN BORED PILES CONSTRUCTION PLANNING: CASE STUDY ON A BUIDLING PROJECT IN HONG KONG

  • Stephen K.K. Cheng;Ming Lu;Hongqin Fan
    • International conference on construction engineering and project management
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    • 2009.05a
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    • pp.747-753
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    • 2009
  • Planning the construction for a system of bored piles in building foundation engineering is (1) to predict the time duration required to complete all the bored piles with due consideration of relevant engineering factors and site constraints; then (2) to predict the total project time generally by aggregating the predicted working duration for construction of each bored pile. The duration for construction of an individual bored pile results from analyzing various working sequences and different activity duration (such as predrilling, excavation, steelfixing, air-lifting, and concreting, etc.), which is informed by experiences and site records of previous projects. However, determining the project duration for constructing many bored piles on one site is much more complicated than adding up the time duration for individual piles. In practice, project schedules are often found to be unrealistic and incorrect during the construction stage. This is because construction planning is not based on a exhaustive and comprehensive evaluation of site factors, such as site layout plan, site constraints, quality control, environmental control, safety control and logical relationships between different trades. In this paper, we identify those factors based on a foundation engineering site in Hong Kong with ninety-seven bored piles and address their effects on uncertainties in activity time and project time.

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One Pot Synthesis of Novel Cyanopyridones as an Intermediate of Bioactive Pyrido[2,3-d]Pyrimidines

  • Khatri, Taslimahemad T.;Shah, Viresh H.
    • Journal of the Korean Chemical Society
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    • v.58 no.4
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    • pp.366-376
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    • 2014
  • Synthesis, structural characterization, and biological activity studies of novel pyrido[2,3-d]pyrimidines (10a-h, 11a-h) are described. Cyclization of cynoacetamides (4, 5) with malonitrile (7) and aldehyde (6a-h) via Hantzsch pyridine synthesis afforded cyanopyridones (8a-h, 9a-h), which on cyclization with formic acid under microwave conditions led to the final product. All the reactions are significantly faster and the isolated yields are remarkably higher in microwave conditions compared to the conventionally heated reactions. The compounds were tested in vitro for their antibacterial activity against Escherichia coli, Pseudomonas aeruginosa, Bacillus subtillus, Staphylococcus aureus, and Micrococcus luteus and antifungal activity against Trichphyton longifusus, Candida albicans, Microsporum canis, Fusarium solani. Compounds 10b, 10e, 11b and 11e exhibited good antibacterial and antifungal activities compared with standards.

Antioxidant and Antibacterial Activity of Water Soluble Polysaccharide from Defatted Botryococcus braunii (탈지 미세조류 Botryococcus braunii 로부터의 수용성 다당의 항산화 활성과 항균활성)

  • Lee, Da Gyung;Park, Jae Kweon
    • Journal of Marine Bioscience and Biotechnology
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    • v.7 no.2
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    • pp.71-78
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    • 2015
  • Sulfated polysaccharides from plants or seaweed are well known for antioxidant, anticoagulant activity or other biological activities. The aim of the present study is to optimize the condition for the isolation of water soluble polysaccharides (WSP) and evaluate the biological activity. WSP was isolated from defatted microalgae B. braunii using chlorosulfonic acid or sulfuric acid. Among WSP isolated using sulfuric acid showed the lowest the content of total carbohydrates (g/L), whereas showed the highest antioxidant activity. Also the preliminary structural analysis of WSP was performed by FT-IR spectroscopy analysis.

Efficacy of the Rhinacanthus nasutus Nees Leaf Extract on Dermatophytes with Special Reference to Trichophyton mentagrophytes var. mentagrophytes and Microsporum canis

  • Darah, I.;Jain, K.
    • Natural Product Sciences
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    • v.7 no.4
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    • pp.114-119
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    • 2001
  • The effect of Rhinacanthus nasutus leaf extract on the growth of dermatophytes had been investigated. In vitro the extract exhibited high activity against various species of dermatophytes (Trichophyton mentagrophytes var. mentagrophytes, T. mentagrophytes var. interdigitale, T. rubrum, Microsporum canis and M. gypseum). The minimal inhibitory concentration (MIC) values of the extract revealed that all the dermatophytes tested had MIC values of 13.6 mg/ml. The extract exhibited fungistatic activity at lower concentrations $({\leq}13.6\;mg/ml\;or\;below\;the\;MIC\;value)$ and fungicidal activity at higher concentrations $({\geq}13.6\;mg/ml$\;or\;above\;the\;MIC\;value)$. The results suggested that the extract acted on the cell wall of the dermatophytes which subsequently leading to the formation of cytopathological and membrane structural degeneration and finally leading to cell lysis and death.

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Ammonia decomposition over titanium carbides

  • Choi, Jeong-Gil
    • Journal of the Korean Crystal Growth and Crystal Technology
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    • v.22 no.6
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    • pp.269-273
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    • 2012
  • Ammonia decomposition over titanium carbides were investigated using eight different samples which have been synthesized by TPR (temperature-programmed reduction) method of titanium oxide ($TiO_2$) with pure $CH_4$. The resulting materials which were synthesized using wo different heating rates and space velocity exhibited the different surface areas. These results indicated that the structural properties of these materials have been related to heating rates and space velocity employed. The titanium carbides prepared in this study proved to be active for ammonia decomposition, and the activity changed with the particle size/surface area. These showed the relationship between ammonia decomposition activity and the different active species. Compared to molybdenum carbide, the titanium carbides were one order of magnitude less active, suggesting the correlation between the activity difference and the degree of electron transfer between metals and carbon in metal carbides.

Nematicidal Activity and Chemical Component of Poria cocos

  • Li, Guo-Hong;Shen, Yue-Mao;Zhang, Ke-Qin
    • Journal of Microbiology
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    • v.43 no.1
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    • pp.17-20
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    • 2005
  • Poria cocos, a famous traditional Chinese medicine, was found to have nematicidal activity in experiments searching for nematicidal fungi. The experiment showed it could kill 94.9% of the saprophytic nematode, Panagrellus redivivue, 92.6% of the root-knot nematode, Meloidogyne arenaria, and 93.5% of the pine nematode, Bursaphelenchus xylophilus, on PDA plate within 12 hours. According to the nematicidal activity, three new compounds, 2, 4, 6-triacetylenic octane diacid, 2, 4, 5, 6-tetrahydroxyhexanoic acid and 3, 4-dihydroxy-2-keto-n-butyl 2,4,5,6-tetrahydroxyhexanate, were isolated from submerged cultures of Poria cocos. Of these, 2, 4, 6-triacetylenic octane diacid could kill 83.9% Meloidogyne arenaria and 73.4% Panagrellus redivivus at 500 ppm within 12 hours. Here, it is reported for the first time that Poria cocos has nematicidal activity.

Japan's experience on long-span bridges monitoring

  • Fujino, Yozo;Siringoringo, Dionysius M.;Abe, Masato
    • Structural Monitoring and Maintenance
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    • v.3 no.3
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    • pp.233-257
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    • 2016
  • This paper provides an overview on development of long-span bridges monitoring in Japan, with emphasis on monitoring strategies, types of monitoring system, and effective utilization of monitoring data. Because of severe environment condition such as high seismic activity and strong wind, bridge monitoring systems in Japan historically put more emphasis on structural evaluation against extreme events. Monitoring data were used to verify design assumptions, update specifications, and facilitate the efficacy of vibration control system. These were among the first objectives of instrumentation of long-span bridges in a framework of monitoring system in Japan. Later, monitoring systems were also utilized to evaluate structural performance under various environment and loading conditions, and to detect the possible structural deterioration over the age of structures. Monitoring systems are also employed as the basis of investigation and decision making for structural repair and/or retrofit when required. More recent interest has been to further extend application of monitoring to facilitate operation and maintenance, through rationalization of risk and asset management by utilizing monitoring data. The paper describes strategies and several examples of monitoring system and lessons learned from structural monitoring of long-span bridges in Japan.