• Title/Summary/Keyword: Species similarities

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Analysis of Genetic Diversity of Leaf Blight Pathogen of Sweet Persimmon Pestalotiopsis species with Isozyme Band Patterns (단감나무 둥근갈색 무늬병균 Pestalotiopsis spp.의 isozyme을 통한 유전다양성 분석)

  • 이윤수;우수진;최혜선;김경수;강원희;김명조;심재욱;장태현;임태헌
    • Korean Journal Plant Pathology
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    • v.14 no.5
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    • pp.502-506
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    • 1998
  • In this study, we calculated the genetic relationships of Pestalotiopsis species collected from various places in southern part of Korea through isozyme analyses. As a result, EST showed the largest number of band, and the number of bands were ranged from 5 to 7 on the average. All the isozymes used in this study showed distinctive band patterns for each isolates. Similarities among the compared isolates ranged from 48 to 93%. Isolates SP7, SP19 and SP23 showed more than 90% similarities, and most isolates showed similarities ranging from 65 to 82%.

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Ecological Study on the Intertidal Zone around Cheju Island 1. Estimation of Plankton Production and Community Structure of Marine Shells - Community Structure of Molluscan Shells (제주도 조간대의 생태학적 기초연구 1. 플랑크톤에 의한 생산량추정 및 패류의 군집구조-패류의 군집구성)

  • 이정재;좌용우
    • The Korean Journal of Malacology
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    • v.4 no.1
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    • pp.17-29
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    • 1988
  • The study had been carried out three times, from April 1987 for the purpose of analysis on the community structure and the distribution patterns of the Molluscan shells at the intertidal zone of Cheju Island. 1) The Molluscan shells collected and identified at all studied sites were composed of 3 classes, 10 orders, 23 families and 42 species.2) In all studied sites, individual numbers according to species were Nodilittorina exigua, Monodonta neritoides, Lunella coronata coreensis, Heminerita japonica in order. On the other hand, the dominant species of the rocky sits were N. exigua, M. neritoides and the rocky and silty-sand sites was Batillaris multiformis.3) In the vertical zonation, in the supralitorial zone, N. exigua was dominant species and the wpper-tidal zone, N. exigua, H. japonica and B. Multiformis were dominant species, but B. multiformis was dominant in the rocky and silty sand sites. In the middle tidal zone, M. neritodes, H. japonica, L. coronata coreensis were dominant and in the lower tidal zond, M. neritodes, L. coronata coreensis, Liolophura japonica were dominant.4)In the analysis on community of Molluscan shells, Chagwi, Pyoson an dAewol sites were more diverse than other sites in the species diversity and environmental inhibits were also favorable.5) Community similarities among the studied sites based on the similarities values were divided into two groups according to the difference of the ground: Hagwi, Chongdal and Sehwa sites group and the others sites group.

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Characteristics of Fish Communities and Length-weight Relationships of Dominant Species (Zacco platypus) in Seomjin River (섬진강 수계 어류군집 특성과 우점종 피라미(Zacco platypus)의 전장 - 체중 관계 분석)

  • Lee, Sun Ho;Kim, Hyo Gyeom;Jo, Hyunbin;Kwak, Ihn-Sil
    • Korean Journal of Ecology and Environment
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    • v.54 no.1
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    • pp.12-23
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    • 2021
  • As fish communities are sensitive to natural environmental changes as well as anthropogenic pressures, their composition and characteristics help us to assess the aquatic ecosystem health. The fish fauna and the length-weight relationship of Zacco platypus in the Seomjin River system were investigated from July 2018 to May 2019. The collected species during the survey period were 49 species belong to 14 families including 19 Korean endemic and two endangered species. According to Bray-Curtis similarities, 14 sites were divided into four groups based on the fish community composition; two groups(group A, B) and two uncategorized sites(group C, D). There were significant differences between groups A and B(analysis of similarities, R=0.722, p=0.002). A similarity percentage analysis revealed that Z. koreanus(8.55%), Micropterus salmoides(6.90%), and Lepomis macrochirus (4.90%) contributed to these differences of fish assemblages between group A and B. Group A showed higher relative abundances of exotic species such as M. salmoides and L. macrochirus, while Z. platypus and Z. koreanus which are the common species in Korea, were the most dominant species in group B. Based on the length-weight relationship of Z. platypus, b values were varied from 2.82 to 3.80, indicating that growth patterns of the species were spatially different. This study could be served as baseline data for understanding fish fauna, assessing habitat characteristics based on the fauna, and identifying health conditions of Z. platypus in the Seomjin River system.

Spatial and Temporal Distribution of Macrobenthos in Intertidal Hard Bottoms in Dokdo Island

  • Kim, Jong-Chun;Park, Kang-Wook;Yoo, Kyong-Dong;Jung, Sung-Yong
    • Korean Journal of Environment and Ecology
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    • v.29 no.2
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    • pp.221-227
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    • 2015
  • This study was carried out to measure seasonal changes in the community structure and species composition of marobenthos in the intertidal area of Dokdo. The macrobenthos identified during this study was comprised of 36 species: predominately 25 species of mollusks(69.4 %), 6 species of arthropods(16.7 %), 3 species of echinodermata(8.3 %) and 1 species of cnidaria (5.6 %). The number of marobenthos species ranged from 27 in Spring to 33 in Autumn. In terms of the top 10 dominant species, there were 7 species of mollusks and 3 species of arthropods in the this study. After analyzing the bray-curtis similarity, it was divided into two large groups(A, B). Such group classification matched the SIMPROF(Similarity Profile Analysis) and the one-way ANOSIM(Analysis of similarities) analysis.

Two New Species of Arcuphantes (Araneae: Linyphiidae) from Korea

  • Seo, Bo-Keun
    • Animal Systematics, Evolution and Diversity
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    • v.22 no.1
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    • pp.101-104
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    • 2006
  • Two new species of Arcuphantes Chamberlin and Ivie, 1943 (Linyphiidae), Arcuphantes juwangensis n. sp. and Arcuphantes namhaensis n. sp., are described with illustrations. All Korean Arcuphantes have a convoluted epigynal scape, and show close similarities in their morphological characters, but easily discriminated in the structures of proximal protuberances and the distal wing-shape of their epigynum.

Feeding Habits of 6 Shark Species in the Southern Sea of Korea (남해안에 출현하는 상어류 6종의 식성)

  • Huh, Sung-Hoi;Park, Joo-Myun;Park, Se-Chang;Kim, Ji-Hyung;Baeck, Gun-Wook
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.43 no.3
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    • pp.254-261
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    • 2010
  • The feeding habits of six shark species, Scyliorhinus torazame, Mustelus manazo, Squalus megalops, Isurus oxyrinchus, Alopias pelagicus, and Carcharhinus plumbeus were studied using the stomach contents of 463 specimens collected between January and February 2007 in the southern sea of Korea. They consumed different prey items. S. torazame preyed mainly crustaceans, and M. manazo on crustaceans and fishes. S. megalops, I. oxyrinchus, A. pelagicus, and C. plumbeus consumed predominately fishes. Non-metric multi-dimensional scaling (NMDS) ordination plots emphasized that dietary similarities separated thesix shark species into three trophic groups based on similarities in percentage Index of Relative Importance (%IRI): Group I (crustacean feeders), Group II (fish and crustacean feeders), and Group III (fish feeders).

Newly recorded genera and species, Pantanalinema rosaneae and Alkalinema pantanalense (Leptolyngbyaceae, Cyanobacteria) isolated in Korea

  • Lee, Ok-Min
    • Journal of Species Research
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    • v.11 no.1
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    • pp.10-21
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    • 2022
  • Two strains of cyanobacteria were isolated from the soil of Seodaemun-gu, Seoul and from the gravel of the Ansung Stream, Gyeonggi Province, Korea, respectively. They were identified as Pantanalinema rosaneae and Alkalinema pantanalense under the Leptolyngbyaceae through the morphological, ecological, and molecular analyses and first reported in Korea. Belonging to the Leptolyngbya morphotypes, they are thin filamentous cyanobacteria and morphologically indistinguishable cryptic species. The strains of P. rosaneae and A. pantanalense isolated in Korea revealed the same cluster as their type species in the phylogenetic analysis using the 16S rRNA gene sequences, and similarities in the secondary structures of 16S-23S ITS sequences. Although both P. rosaneae and A. pantanalense were collected from water samples in the Pantanal wetland of Brazil, the P. rosaneae obtained in Korea, was soil-dwelling subaerophytic species whereas A. pantanalense was epilithic species living on gravel in the freshwater. Therefore, they are considered to have an extensive habitat.

A report of 18 unrecorded prokaryotic species isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus)

  • Lee, So-Yeon;Han, Jeong Eun;Kim, Pil Soo;Bae, Jin-Woo
    • Journal of Species Research
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    • v.9 no.4
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    • pp.325-338
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    • 2020
  • The animal gut is filled with highly diverse microbes associated with host metabolism, physiology, and pathology. However, numerous animal gut microbes have not been cultured or reported. We isolated various bacterial species using culture-dependent approaches during a comprehensive investigation of endangered endemic vertebrate species in the Republic of Korea. A total of 18 unrecorded bacterial species were isolated from the feces of an Oriental stork (Ciconia boyciana), and from the intestinal tracts of a cobitid fish (Kichulchoia multifasciata) and a Korean splendid dace (Coreoleuciscus splendidus). Based on a phylogenetic analysis of 16S rRNA gene sequences, we discovered species belonging to the phyla Actinobacteria (eight species), Firmicutes (seven species), Proteobacteria (two species), and Bacteroidetes (one species). Based on their high 16S rRNA gene sequence similarities (>98.7%) and formation of monophyletic clades with type species, each species was classified into an independent and predefined bacterial species. Gram-stain reaction, colony and cell morphology, basic biochemical characteristics, isolation source, and NIBR IDs for each species are described in the species description section.

Electrophoretic Comparison of Mycelial Protein and Enzyme Patterns in Three Interspecies of Some Edible Fleshy Fungi (전기영동법(Disc)에 의한 고등균류의 몇개 종간에 있어서 단백질 및 효소의 비교)

  • 홍순우;박민철
    • Korean Journal of Microbiology
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    • v.12 no.3
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    • pp.138-146
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    • 1974
  • Taxonomic relations among three species of some edible fleshy fungi(Lentinus edodes, Pleurotus ostreatus, Flammulina velutipes) in the family Tricholomataceae were examined by using polyacrylamied gel disc electrophoresis. The soluble, crude extract of mycelium grown on potato sucrose broth was subjected to electrophoresis. Similarities in the protein bands for each isolated of one species were compared with those for others. In the banding patterns there was a closer relationship between isolates within one species than among isolates of different species. However, the isozyme patterns obtained from each isolate of Peurotus ostreatus (esterase, peroxidase, tyrosinase) were appeared to represent the degree of geographical variability within one species.

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A report of 35 unrecorded bacterial species belonging to the classes Alphaproteobacteria and Betaproteobacteria in Korea

  • Jung, Hye Su;Yoon, Jung-Hoon;Joh, Kiseong;Seong, Chi-Nam;Kim, Won-Yong;Im, Wan-Taek;Kim, Myung-Kyum;Cha, Chang-Jun;Kim, Seung-Bum;Jeon, Che-Ok
    • Journal of Species Research
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    • v.10 no.1
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    • pp.12-22
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    • 2021
  • During a comprehensive investigation of indigenous prokaryotic species in Korea, 25 and 10 bacterial strains assigned to the classes Alphaproteobacteria and Betaproteobacteria, respectively, were isolated from diverse environmental habitats, including soil, mud, tidal field, sea water, sand, rusted iron, and leaf. Based on their high 16S rRNA gene sequence similarities (>98.7%) and the formation of robust phylogenetic clades with type species, each strain was assigned to an independent and predefined bacterial species. Since there were no published or official reports regarding these 35 isolates in Korea, they - 25 species of 14 families in the 5 orders of Alphaproteobacteria and 10 species of 3 families in the two orders of Betaproteobacteria - have been reported as unrecorded species in Korea. In addition, Gram reaction, colony and cell morphology, basic biochemical characteristic, isolation source, and strain ID of each species are also described in the species description sections.