Browse > Article
http://dx.doi.org/10.12651/JSR.2022.11.1.010

Newly recorded genera and species, Pantanalinema rosaneae and Alkalinema pantanalense (Leptolyngbyaceae, Cyanobacteria) isolated in Korea  

Lee, Ok-Min (Department of Life Science, College of Natural Science, Kyonggi University)
Publication Information
Journal of Species Research / v.11, no.1, 2022 , pp. 10-21 More about this Journal
Abstract
Two strains of cyanobacteria were isolated from the soil of Seodaemun-gu, Seoul and from the gravel of the Ansung Stream, Gyeonggi Province, Korea, respectively. They were identified as Pantanalinema rosaneae and Alkalinema pantanalense under the Leptolyngbyaceae through the morphological, ecological, and molecular analyses and first reported in Korea. Belonging to the Leptolyngbya morphotypes, they are thin filamentous cyanobacteria and morphologically indistinguishable cryptic species. The strains of P. rosaneae and A. pantanalense isolated in Korea revealed the same cluster as their type species in the phylogenetic analysis using the 16S rRNA gene sequences, and similarities in the secondary structures of 16S-23S ITS sequences. Although both P. rosaneae and A. pantanalense were collected from water samples in the Pantanal wetland of Brazil, the P. rosaneae obtained in Korea, was soil-dwelling subaerophytic species whereas A. pantanalense was epilithic species living on gravel in the freshwater. Therefore, they are considered to have an extensive habitat.
Keywords
Alkalinema pantanalense; cryptic; Pantanalinema rosaneae; saline-alkaline lake; subaerophytic;
Citations & Related Records
Times Cited By KSCI : 1  (Citation Analysis)
연도 인용수 순위
1 Raabova, L., L. Kovacik, J. Elster and O. Strunecky. 2019. Review of the genus Phormidesmis(Cyanobacteria) based on environmental, morphological, and molecular data with description of a new genus Leptodesmis. Phytotaxa 395(1):1-16.   DOI
2 Song, G., Y. Jiang and R. Li. 2015. Scytolyngbya timoleontis, gen. et sp. nov.(Leptolyngbyaceae, Cyanobacteria): a novel false branching cyanobacteria from China. Phytotaxa 224(1):72-84.   DOI
3 Stamatakis, A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinform 22(1):2688-2690.   DOI
4 Taton, A., A. Wilmotte, J. Smarda, J. Elster and J. Komarek. 2011. Plectolyngbya hodgsonii: a novel filamentous cyanobacterium from Antarctic lakes. Polar Biology 34(2):181-191.   DOI
5 Vaz, M.G.M.V., D. Bonaldo-Genuario, A.P. Dini-Andreote, C.F. da Silva Malone, C.L. Sant'Anna, L. Barbiero and M. Fatima-Fiore. 2015. Pantanalinema gen. nov. and Alkalinema gen. nov.: novel pseudanabaenacean genera (Cyanobacteria) isolated from saline-alkaline lakes. International Journal of Systematic and Evolutionary Microbiology 65(1):298-308.   DOI
6 Rippka, R., J. Deruelles, J.B. Waterbury, M. Herdman and R.Y. Stanier. 1979. Generic assignments, strain histories and properties of pure cultures of cyanobacteria. Microbiology 111(1):1-61.   DOI
7 Casamatta, D.A., J.R. Johansen, M.L. Vis and S.T. Broadwater. 2005. Molecular and morphological characterization of ten polar and near-polar strains within the Oscillatoriales (Cyanobacteria). Journal of Phycology 41(2):421-438.   DOI
8 Anagnostidis, K. and J. Komarek. 1988. Modern approach to the classification system of the cyanophytes 3: Oscillatoriales. Algological Studies 50/53:327-472.
9 Kim, M., H.S. Oh, S.C. Park and J. Chun. 2014. Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. International Journal of Systematic and Evolutionary Microbiology 64(2):346-351.   DOI
10 Becerra-Absalon, I., J.R. Johansen, M.A. Munoz-Martin and G. Montejano. 2018. Chroakolemma gen. nov. (Leptolyngbyaceae, Cyanobacteria) from soil biocrusts in the semi-desert Central Region of Mexico. Phytotaxa 367(3):201-218.   DOI
11 Chakraborty, S., V. Maruthanayagam, A. Achari, A. Pramanik, P. Jaisankar and J. Mukherjee. 2019. Euryhalinema mangrovii gen. nov., sp. nov. and Leptoelongatus litoralis gen. nov., sp. nov. (Leptolyngbyaceae) isolated from an Indian mangrove forest. Phytotaxa 422(1):58-74.   DOI
12 Dadheech, P.K., H. Mahmoud, K. Kotut and L. Krienitz. 2012. Haloleptolyngbya alcalis gen. et sp. nov., a new filamentous cyanobacterium from the soda lake Nakuru, Kenya. Hydrobiologia 691(1):269-283.   DOI
13 Dvorak, P., E. Jahodarova, P. Hasler, E. Gusev and A. Poulickova. 2015. A new tropical cyanobacterium Pinocchia polymorpha gen. et sp. nov. derived from the genus Pseudanabaena. Fottea 15(1):113-120.   DOI
14 Guiry, M.D. and G.M. Guiry. 2021. AlgaeBase. World-wide electronic publication. National University of Ireland, Galway. Available from: http://www.algaebase.org/(accessed on 1 August 2021).
15 Jahodarova, E., P. Dvorak, P. Hasler and A. Poulickova. 2017. Revealing hidden diversity among tropical cyanobacteria: the new genus Onodrimia (Synechococcales, Cyanobacteria) described using the polyphasic approach. Phytotaxa 326(1):28-40.   DOI
16 Hall, T.A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposia Series 41:95-98.
17 Komarek, J. 2013. Cyanoprokaryota -3. Teil/ 3rd Part: Heterocytous genera. In: B. Budel, G. Gartner, L. Krienitz and M. Schagerl (eds.), Susswasserflora von Mitteleuropa 19/3. Elsevier/Spektrum, Heidelberg, 1130 pp.
18 Steinberg, C.E.W., H. Schafer and W. Beisker. 1998. Do acid-tolerant cyanobacteria exist?. Acta Hydrochimica et Hydrobiologica 26(1):13-19.   DOI
19 Turicchia, S., S. Ventura, J. Komarkova and J. Komarek. 2009. Taxonomic evaluation of cyanobacterial microflora from alkaline marshes of northern Belize. 2. Diversity of oscillatorialean genera. Nova Hedwigia 89(1):165-200.   DOI
20 Genuario, D.B., W.R. de Souza, R.T.R. Monteiro, C.L. Sant'Anna and I.S. Melo. 2020. Erratum: Amazoninema gen. nov.(Synechococcales, Pseudanabaenaceae) a novel cyanobacteria genus from Brazilian Amazonian rivers. International Journal of Systematic and Evolutionary Microbiology 70(2):1441-1442.   DOI
21 Hoffmann, L., J. Komarek and J. Kastovsky. 2005. System of cyanoprokaryotes(cyanobacteria)-state in 2004. Algological Studies 117(1):95-115.   DOI
22 Lee, N.J., Y. Seo, J.S. Ki and O.M. Lee. 2020. Morphology and molecular description of Wilmottia koreana sp. nov. (Oscillatoriales, Cyanobacteria) isolated from the Republic of Korea. Phytotaxa 447(4):237-251.   DOI
23 Komarek, J., J. Kastovsky, J. Mares and J.R. Johansen. 2014. Taxonomic classification of cyanoprokaryotes(cyanobacterial genera) 2014, using a polyphasic approach. Preslia 86(4):295-335.
24 Perkerson III, R.B., J.R. Johansen, L. Kovacik, J. Brand, J. Kastovsky and D.A. Casamatta. 2011. A unique pseudanabaenalean (Cyanobacteria) genus Nodosilinea gen. nov. based on morphological and molecular data. Journal of Phycology 47(6):1397-1412.   DOI
25 Kiel, G. and C.C. Gaylarde. 2006. Bacterial diversity in biofilms on external surfaces of historic buildings in Porto Alegre. World Journal of Microbiology and Biotechnology 22(3):293-297.   DOI
26 Komarek, J. 2016. A polyphasic approach for the taxonomy of cyanobacteria: principles and applications. European Journal of Phycology 51(3):346-353.   DOI
27 Konstantinou, D., E. Voultsiadou, E. Panteris, S.K. Zervou, A. Hiskia and S. Gkelis. 2019. Leptothoe, a new genus of marine cyanobacteria (Synechococcales) and three new species associated with sponges from the Aegean Sea. Journal of Phycology 55(4):882-897.   DOI
28 Kumar, S., G. Stecher and K. Tamura. 2016. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Molecular Biology and Evolution 33(7):1870-1874.   DOI
29 Lee, N.J., Y. Seo, J.S. Ki and O.M. Lee. 2019. A study of newly recorded genus and species for aerial cyanobacteria Wilmottia murrayi (Oscillatoriales, Cyanobacteria) in Korea. Korea Journal of Environmental Biology 37(3):260-267.   DOI
30 Malone, C.F.S., J. Rigonato, H.D. Laughinghouse, E.C. Schmidt, Z.L. Bouzon, A . Wilmotte, M.F. Fiore and C.L. Sant'Anna. 2015. Cephalothrix gen. nov. (Cyanobacteria): towards an intraspecific phylogenetic evaluation by multilocus analyses. International Journal of Systematic and Evolutionary Microbiology 65(9):2993-3007.   DOI
31 Zimba, P.V., I.S. Huang, J.E. Foley and E.W. Linton. 2017. Identification of a new-to-science cyanobacterium, Toxifilum mysidocida gen. nov. & sp. nov. (Cyanobacteria, Cyanophyceae). Journal of Phycology 53(1):188-197.   DOI
32 Miscoe, L.H., J.R. Johansen, M.A. Vaccarino, N. Pietrasiak and A.R. Sherwood. 2016. Novel cyanobacteria from caves on Kauai, Hawaii. Bibliotheca Phycologica 120:75-152.
33 Page, R.D.M. 1996. TreeView: An application to display phylogenetic trees on personal computers. Bioinformatics 12(4):357-358.   DOI
34 Zammit, G., D. Billi and P. Albertano. 2012. The subaerophytic cyanobacterium Oculatella subterranea (Oscillatoriales, Cyanophyceae) gen. et sp. nov.: a cytomorphological and molecular description. European Journal of Phycology 47(4):341-354.   DOI
35 Zuker, M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Research 31(13):3406-3415.   DOI
36 Neilan, B.A., D. Jacobs, L.L. Blackall, P.R. Hawkins, P.T. Cox and A.E. Goodman. 1997. rRNA sequences and evolutionary relationships among toxic and nontoxic cyanobacteria of the genus Microcystis. International Journal of Systematic and Evolutionary Microbiology 47(3):693-697.
37 Genuario, D.B., W.R. de Souza, R.T.R. Monteiro, C.L. Sant'Anna and I.S. Melo. 2018. Amazoninema gen. nov., (Synechococcales, Pseudanabaenaceae) a novel cyanobacteria genus from Brazilian Amazonian rivers. International Journal of Systematic and Evolutionary Microbiology 68(7):2249-2257.   DOI
38 Konstantinou, D., E. Voultsiadou, E. Panteris and S. Gkelis. 2021. Revealing new sponge-associated cyanobacterial diversity: novel genera and species. Molecular Phylogenetics and Evolution 155:1-16.
39 Lauterborn, H. 1915. Die sapropelische Lebewelt. Ein Beitrag zur biologie des Faulschlamms naturlicher Gewasser. Verhandlungen des Naturhistorischen-Medizinischen Vereins zu Heidelberg 13:395-481.
40 Malone, C.F.S., D.B. Genuario, M.G.M.V. Vaz, M.F. Fiore and C.L. Sant'Anna. 2021. Monilinema gen. nov., a homocytous genus (Cyanobacteria, Leptolyngbyaceae) from saline-alkaline lakes of Pantanal wetlands, Brazil. Journal of Phycology 57(2):473-483.   DOI
41 QGIS. 2021. Welcome to the QGIS Project! Qgis. Available from: http://www.qgis.org (accessed on 26 October 2020).
42 Sciuto, K. and I. Moro. 2016. Detection of the new cosmopolitan genus Thermoleptolyngbya (Cyanobacteria, Leptolyngbyaceae) using the 16S rRNA gene and 16S-23S ITS region. Molecular Phylogenetics and Evolution 105:15-35.   DOI