• Journal of Soil and Groundwater Environment
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• v.25 no.1
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• pp.25-36
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• 2020

In a redox transition zone, geochemical reactions are facilitated by active bacteria that mediate reactions involving electrons, and arsenic (As) and iron (Fe) cycles are the major electron transfer reactions occurring at such a site. In this study, the effect of repetitive redox changes on soil bacterial community in As-contaminated soil was investigated. The results revealed that bacterial community changed actively in response to redox changes, and bacterial diversity gradually decreased as the cycle repeated. Proportion of strict aerobes and anaerobes decreased, while microaerophilic species such as Azospirillum oryzae group became the predominant species, accounting for 72.7% of the total counts after four weeks of incubation. Bacterial species capable of reducing Fe or As (e.g., Clostridium, Desulfitobacterium) belonging to diverse phylogenetic groups were detected. Indices representing richness (i.e., Chao 1) and phylogenetic diversity decreased from 1,868 and 1,926 to 848 and 1,121, respectively. Principle component analysis suggests that repetitive redox fluctuation, rather than oxic or anoxic status itself, is an important factor in determining the change of soil bacterial community, which in turn affects the cycling of As and Fe in redox transition zones.

• Journal of Life Science
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• v.20 no.8
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• pp.1151-1158
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• 2010

The genetic diversity and population structures of fourteen Carex okamotoi (Cyperaceae) populations in Korea were determined using genetic variation at 25 allozyme loci. The Carex okamotoi species is native to Korea. It is endemic to three mountains (Mt. Taeback, Mt. Sobak, and Mt. Noreong) where it is found at 700~1,500 m above sea level. The percentage of polymorphic loci was 40.0%. Genetic diversity at the species level and at the population level was low ($H_{ES}$=0.106; $H_{EP}$=0.094), and the extent of the population divergence was relatively low ($G_{ST}$=0.082). Measurement of deviation from random mating ($F_{IS}$) within the 14 populations was 0.238. An indirect estimate of the number of migrants per generation was 2.78 (Nm=2.78). Analysis of fixation indices revealed a substantial heterozygosity deficiency in some populations and at some loci. Mean genetic identity between populations was 0.986.

• Journal of Life Science
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• v.15 no.1 s.68
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• pp.33-37
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• 2005

Sasa borealis Makino is distributed in East Asia such as Korea, Fushun in China, and Japan. Especially the species is only found in the high altitude (above 600 m) at mountain of cold regions including The Korean Peninsula. The level of genetic diversity and population structure of this species was surveyed using starch gel electrophoresis at putative five enzyme loci from three natural populations in Korea. Results from twelve loci indicated that genetic diversity was low. In addition, analysis of fixation indices revealed a substantial heterozygosity deficiency in some populations and loci. The reasons for the deficit of heterozygosity may be partly considered inbreeding, small population sizes, and mating of demes. S. borealis can reproduce extensively by producing rhizomes and potentially by sexually produced seeds. Rhizomes are generally long, prostate stems rooting at the nodes.

• Korean Journal of Environmental Biology
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• v.33 no.2
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• pp.223-229
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• 2015

Pre-monsoon dynamics of zooplankton community were investigated in the downstream of the Gagok stream flowing into the East Sea of Korea. Monthly sampling was carried out to collect zooplankters at five sites in the stream during the period between April and July 2014. Dissolved oxygen contents exceeded $7.0mg\;L^{-1}$ all the time. Water temperature was in a range of 15.7 to $24.9^{\circ}C$ and pH 7.4 to 8.8, respectively. A total of 75 taxa consisted of 36 species of rotifers, 16 species of cladocerans, 16 species of copepods, four kinds of aquatic insects, two kinds of decapods and one nematod was occurred. One species of marine copepod and one cladoceran, and one species of brackish rotifer and one copepod distributed at the station located in the stream mouth. Zooplankton abundance showed to vary from 42 to 4202 individuals $m^{-3}$ due to the explosion of aquatic insects and Alona sp. at site 2 located in the downstream in April. Heavy rainfall during the monsoon period seems to decrease the zooplankton abundance caused by diffusion and drifting to the sea. Species diversity indices were generally high between 1.2~2.3 and were recorded to be high at the downstream throughout the study period. With the zooplankton dynamics, the influence of the input of sea waters into the stream seemed to be confined to some hundred meters of the stream mouth facing the East Sea.

• The Korean Journal of Ecology
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• v.16 no.4
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• pp.429-438
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• 1993

This is a report on the early vegetation and the secondary succession in the burned area of SeobJe-Go1 of $IIwasan-MY\v{o}n,\;Y\v{o}ngch\v{o}n-Gun,\;Ky\v{u}ngsangbuk-do$ Province. The forest fire occurred on April 8, 1982 and the pine forest and its floor vegetation were burned down. The investigation was done six times from August 20, 1982 to August 13, 1983. The results are summarized as follows: the floristic composition of burned areas $B_1,\;B_2$, and unburned areas $U_1,\;U_2$ were composed of 25, 23, 32, and 27 kinds of vascular plants. respectively. The biological spectra showed the $H-D_1-R_5-e$ type in both the burned and unburned areas. The species of Arundinella hirta, Miscanthus simnsis var. purpurascens and Cares hurnilis var. nana were dominant species in the burned area, while Pinus densiflorrr, Corex humilis var. nana and Rhododendron mucronulatum var. ciliafum were dominant species in the unburned area. Degree of succession of the unburned area was comparatively higher than that of the burned area. Species diversity index and evenness index of the burned area were similar to those of the unburned area. Indices of similarity in sampling sites showed that $B_1\;and\;B_2$ stands were the most similar. pH, total nitrogen, available phosphorus and exchangeable potassium of soil increased but organic matter and total organic carbon decreased after fire.

• Ocean and Polar Research
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• v.33 no.1
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• pp.85-97
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• 2011

The tidal flats of Korea today have reduced by 40% in size compared to 1964. To manage this important habitat properly, development of well-organized and nationwide-applicable grading systems is required. There have been several assessment systems proposed previously in Korea, but they are critically flawed in that selected biological indicators are not adequate and grading criteria are obscure and arbitrary. We reviewed the indicators used in these previous evaluation systems (e.g., diversity indices, quantity and quality of benthic macrofauna, halophytes, water birds, etc.) and subsequently proposed new indicators and an improved grading scheme. For the quantitative assessment of macrobenthic community, biomass reflecting production and ecosystem function is recommended over density, which is much less discriminatory among habitats. Of biodiversity indices used, within-, between-habitat and regional biodiversity indices that accurately reflect sampling efforts are suggested. In addition, we proposed to include species rarity, ecosystem engineers, and the ecological quality index ISEP (Inverse function of Shannon-Wiener Evenness Proportion). As for halophytes, their low spatial coverage on benthic habitat suggests that their presence can be used as an ecological indicator of benthic habitat, regardless of their protective status. We stress the need to introduce 1) quantile approach for quantitative indicators (e.g., diversity, biomass, etc.) in relation to grading, 2) presence-absence approach for spatial or aggregate indicators (e.g., boundaries of halophytes and feeding ground of water birds) and 3) benthic habitat mapping that combines all of these indicators.

• The Korean Journal of Mycology
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• v.43 no.1
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• pp.13-19
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• 2015

Endophytic fungal strains were isolated from 5 aquatic plant species (Trapa japonica, Miscanthus sacchariflorus, Oenanthe javanica, Typha orientalis and Zizania latifolia) native to river wetland of tributary in Nakdong river. Total 34 strains were purely isolated, and then its internal transcribed spacer (ITS) regions were amplified. After that, phylogenetic analysis based on ITS sequences and deduction of diversity indices were done. Fungal isolates were belonged to 17 genera, concretely in Acremonium, Alternaria, Aspergillus, Cladosporium, Emericellopsis, Fusarium, Galactomyces, Leptosphaeria, Microsphaeropsis, Penicillium, Peyronellaea, Phoma, Pseudeurotium, Rhizomucor, Talaromyces, Trematosphaeria and Zalerion. Especially, fungal isolates were distributed intensively in genera Alternaria and Talaromyces. This study deals with the diversity of endophytic fungal species that showing symbiotic relationship with their host aquatic plants.

• Journal of Life Science
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• v.16 no.1
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• pp.64-70
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• 2006

Starch gel electrophoresis was used to estimate genetic diversity and population structure of Pyrola fauriena H. Andr. in Korea. The percentage of polymorphic loci within enzymes was $57.1\%$. The values of genetic diversity at the species level and at the population were higher than average values for herbaceous with similar life history traits (Hes : 0.149; Hep = 0.134, respectively), whereas the extent of the population divergence was relatively low $(G_{ST}=0.082)$. $F_{IS}$, a measure of the deviation from random mating within the 12 populations, was 0.298. An indirect estimate of the number of migrants per, generation (Nm = 2.81) indicates that gene flow is moderate among Korean populations of the species. Analysis of fixation indices revealed a substantial heterozygosity deficiency in some populations and at some loci. This indicates that some populations sampled may have been substructured largely due to rhizotamous spread and decrease of population sizes.

• Korean Journal of Ecology and Environment
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• v.44 no.2
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• pp.226-238
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• 2011

Ichthyological fauna and community structure were surveyed in the Naeseong Stream around the planed Yeongju Dam, Yeongju City, Gyeongsangbuk-do from April 2007 to October 2009, During the survey period, 27 species (25 genera, 10 families) were collected. Cyprinid fish comprised 63.0% (17 species) and cobitid fish comprised 7.4% (2 species). Ten of the 27 species (37.0%) were endemic species. The dominant and subdominant species based on the number of individuals was Zacco platypus (43.2%) and Zacco koreanus (15.8%), respectively. Introduced from the other native rivers and exotic fish were Opsariichthys uncirostris amurensis, Leiocassis ussuriensis, and Micropterus salmoides (11.1%). The declining population density of Zacco koreanus and its subdominant status represents a change, since, up until the mid 1990's, it was widely distributed throughout the area and was the dominant species. The distribution area of Zacco koreanus decreased in size; by 2009, it no longer inhabited the lower reaches of the Naeseong Stream. On the other hand, Zacco platypus remained the dominant species throughout the area, except for the upper-reaches of the water-course. Gobiobotia naktongensis inhabited all areas of Naeseong Stream, which mainly has a sandy bottom. Analyses of the fish community revealed species diversity, even-ness and dominant indices were 0.881, 0.615, and 0.230 respectively. These results showed that the main river, in which the water width and flow are abundant and which has various habitats, has a higher species diversity (0.829) than the tributary (0.735).

• Journal of Fisheries and Marine Sciences Education
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• v.11 no.1
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• pp.98-113
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• 1999

Demersal fishes as second study for the protection-nourishment of fisheries resources in Chinhae Bay were analysed using fish samples collected by a small otter trawler at bimonthly-interval from August, 1997 to June, 1998. Of the 55 species identified, Hexagrammos otakii, Pleuronichthys cornutus, Leiognathus nuchalis, Thrissa koreana, Callionymous lunatus, Acanthogobius flavimanus and Trachurus japonicus predominated in abundance. Especially, Hexagrammos otakii, Pleuronichthys cornutus and Leiognathus nuchalis were always collected at anywhere around a year in the bay. The seasonal fluctuation of number of species is very large as the ranging from 14 species in August to 25, December. The diversity index of individual number and biomass by month and station is 0.68(February)~1.13(October), 0.38(February)~1.06(October) respectively. The indices above mean that the number of species were not distributed broadly over the bay and also concentrated in several species only owing to the local pollutant extent.