• Korean Journal of Soil Science and Fertilizer
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• v.18 no.2
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• pp.221-226
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• 1985

This investigation was undertaken to clarify the effects of consecutive application of insecticide (Hexachlorocyclohexane: HCH, 10 ppm each year) and fungicide (Tetrachloroisophthalonitrile: TPN, 40 ppm each year) on changes of the composition of soil bacterial flora in the experimental plots treated with each pesticide for two years. For these purposes, the isolating of bacterial cells growing on albumin agar plate was carried out with non-treated, HCH-treated and TPN-treated soil. And these isolated strains were grouping in accordance with the first diagnostic table of Cowan & Steel based on the morphological and physiological characteristics of bacterial cells. The mortality rate of bacteria was 30% in control, 44% in HCH and 51% in TPN plot respectively, in the process of obtaining pure culture. This suggests that the application of HCH or TPN enriched the fastidious bacteria in soil. The proportion of Gram-negative strains to the total isolates was 37% in control, 37% in HCH and 75% in TPN plot respectively. This means that the application of TPN enriched Gram-negative strains in soil. And the application of TPN increased the number of Gram-negative, nonspore-forming strains, and meanwhile decreased the number of spore-forming strains. In the results, the application of HCH or TPN changed considerably the composition of soil bacterial flora. And the influences of HCH and TPH on changes of the composition of soil bacterial flora were not equal each to each.

• Korean Journal of Microbiology
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• v.28 no.3
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• pp.199-203
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• 1990

To study distribution of bacterial flora and their biochemical characteristics in the Antarctic soilecosystem, these experiments were performed during the austral summer(Feb., 1989) on the King George Island, Antarctica. The numbers of heterotrophic bacterial colonies and extracellular enzyme actibities were estimated from the Antarctic terrestrial soils which were sampled from 17 different locations near Sejong station (Korea) and Teniente Jubany station (Argentina) on the King George Island. The numbers of heterotrophic bacterial colonies were extremely variable with sampling sites and incubation temperatures. Arithmetric average numbers were $2.5\times 10^{4}$, $2.7\times 10^{7}$ , $6.9\times 10^{5}$ CFU/$cm^{3}$ soil at the incubation temperature of $37^{\circ}C$, $25^{\circ}C$ and $4^{\circ}C$, respectively. The activities of extracellular $\alpha$-glucosidase, $\beta$-glucosidase and N-acetyl-$\beta$-glucosaminidase were shown as similar mean percentage in the colonies obtained at different temperatures. Mean value of protease activities, however, was remarkably higher (92%) in the colonies grown at $4^{\circ}C$,.

• Korean Journal of Soil Science and Fertilizer
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• v.47 no.6
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• pp.451-456
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• 2014

Organic amendment practices can influence diversity and activities of soil microorganisms. There is a need to investigate this impact compared with other types of materials. This study was carried out to evaluate the long term effects of chemical and organic fertilizer on soil microbial community in upland field. During the last 11 years green manure, rice straw compost, rapeseed cake, pig mature compost, NPK, and NPK + pig mature compost were treated in upland soil. Organic fertilizer treatment found with high bacterial colony forming units (CFUs) as compared to chemical and without fertilizer treatment. There was no significant difference in the actinomycetes and fungal population. The average well color development (AWCD) value was the highest in green manure and, the lowest in without fertilizer treatment. Analyses based on the denaturing gradient gel electrophoresis (DGGE) profile showed that rice straw compost and pig mature compost had a similar banding pattern while rapeseed cake, NPK, NPK + pig mature compost and without fertilizer treatment were clustered in another cluster and clearly distinguished from green manure treatment. Bacterial diversity can be highly increased by the application of organic fertilizer while chemical fertilizer had less impact. It can be concluded that green manure had a beneficial impact on soil microbial flora, while, the use of chemical fertilizer could affect the soil bacterial communities adversely.

• Journal of the Korea Organic Resources Recycling Association
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• v.24 no.4
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• pp.77-83
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• 2016

The objectives of this study was to investigate the difference between organic-farming and conventional-farming soils relatives to soil chemical properties and microbial flora. Fifteen soil sampling sites were chosen from the certified organic upland farm, considered with its location, crop and application of organic compost types. Soil chemical properties were analyzed by standard methods established by National Institute of Agricultural Sciences, Rural Development Administration. For the soil chemical properties, the values of pH were ranged from 4.5 to 7.3. The values of electrical conductivity (EC) in the sampling sites were below 2 dS/m of convention cultivation soil. For analyzing the microbial flora, the bacillus(16S rDNA) and cladothricosis(18S rDNA) were analyzed by using PCR-DGGE (Denaturing Gradient Gel Electrophoresis) in the soil of 15 sampling sites. Cluster analysis of biodiversity index was performed by using pattern of DGGE. DGGE patterns and clustering analysis of bacterial DNA from soil extracts revealed that the bacterial community was differentiated between less than 5 years and more than 5 years depending on the cultivation history. But there was no consistent tendency between cultivation history and regional trend in the case of molds. Therefore, it would be very effective to analyze bacterial clusters of organically cultivated soils in long - term cultivated soil for more than 5 years.

• Proceedings of the Korean Society of Soil and Groundwater Environment Conference
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• 2002.04a
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• pp.199-202
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• 2002

Many methods have been developed for the remediation of contaminated soil and groundwater. Among those technologies, in-situ bioremediation is most likely to be cost-effective method for petroleum hydrocarbon contamination. But the in-situ bioremediation can require more time to remediate hydrocarbon-contaminated soil and groundwater than other methods. Therefore we intended to save time of in-situ bioremediation using a biological additive to activate indigenous microbes in soil. The additive, 'Inipol EAP 22' stimulates the growth of specific flora, significantly accelerating the speed at which hydrocarbons are biodegraded. And it hans been tested in accordance with protocol approved by the USEPA and is registered on the National Contingency Plan Product Schedule List. In the experiment, three soil samples contaminated with fuel oil were prepared in the same concentration. Inipol EAP 22 was not added to one sample and was added to the other two samples with 5% and 10% of hydrocarbon by weight respectively. And $CO_2$gas derived from bacterial respiration was analyzed in each samples for 15 days. As a result, 145% and 153% of $CO_2$ evolution (microbial respiration) against the sample without 'Inipol EAP 22' occurred in samples with 'Inipol EAP 22' addition of 5% and 10%, respectively

• Korean Journal of Soil Science and Fertilizer
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• v.29 no.1
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• pp.53-59
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• 1996

This study was conducted to evaluate the effects of fowl dzopping. saw dust and rice hall on the soil microflora in vitro. The experiment was designed in seven treatments with the various organic materials and they were only soil (control). soil + fowl dropping (S+F), soil+fowl dropping+rice hull (S+F+R) soil+fowl dropping*saw dust (S+F+S). soil+chemical fertilizer (S+C.F), fowl dropping+rice hull (F+R) and fowl dropping+saw dust (F+S). All the samples of treatment were incubated in $28{\pm}2^{\circ}C$ condition and tested the activity of soil microflora for 84 days The activity of fungi, total bacteria, gram-negative bacteria and actinomycetes showed the highest values at, twenty-first day and the spore-forming bacteria was at forty-second day after incubation. The number of fungi and gram-negative bacteria showed the highest values in the treatment of F+S, the spore-forming bacteria and the actinomycetes were in the S+F+S. and the number of total bacteria was in the F+C.F., but in the treatment of F+R. all the microorganism except fungi showed the lowest values in their numbers. The composition ratio of dead bacteria was higher in the treatments of S+F+R and F+R than in those of others as 70% and 40% respectively. Actinomycetes isolated from the treatments of S+F and S+F+S were identified as Streptomyces sp.. Nocardia sp., Micromonospora sp. Actinomadura sp. and Saccharomonospora sp.

• Microbiology and Biotechnology Letters
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• v.47 no.1
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• pp.105-115
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• 2019

Saline or alkaline condition in soil inhibits growth of most crop plants and limits crop yields in many parts of the world. Augmenting an alkaline soil with alkali-tolerant bacteria capable of promoting plant growth can be a promising approach in expanding fertile agricultural land. Near-shore environments of Dokdo Island, a remote island located in the middle of the East Sea, appear to have patches of seawater-influenced haloalkaline soil that is unsupportive for growth of conventional plants. To exploit metabolic capacities of alkali-tolerant bacteria for promoting plant growth in saline or alkaline soils, we isolated of alkali-tolerant bacteria from near-shore soil samples in Dokdo and investigated properties of the isolates. Alkali-tolerant bacteria were selectively cultivated by inoculating suspended and diluted soil samples on a plate medium adjusted to pH 10. Fifty colonies were identified based on their $GTG_5$-PCR genomic fingerprints and 16S rRNA gene sequences. Most isolates were affiliated to alkali-tolerant and/or halotolerant genera or species of the phyla Firmicutes (68%), Proteobacteria (30%) and Actinobacteria (2%). Unlike the typical soil bacterial flora in the island, alkali-tolerant isolates belonged to only certain taxa of terrestrial origin under the three phyla, which have traits of plant growth promoting activities including detoxification, phytohormone production, disease/pest control, nitrogen-fixation, phosphate solubilization or siderophore production. However, Firmicutes of marine origin generally dominated the alkali-tolerant community. Results of this study suggest that haloalkaline environments like Dokdo shore soils are important sources for plant growth promoting bacteria that can be employed in bio-augmentation of vegetation-poor alkaline soils.

• Journal of Life Science
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• v.25 no.2
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• pp.189-196
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• 2015

Bacterial diversity was studied in the rhizosphere of Suaeda japonica Makino, which is native to Suncheon Bay in South Korea. Soil samples from several sites were diluted serially, and pure isolation was performed by subculture using marine agar and tryptic soy agar media. Genomic DNA was extracted from 29 pure, isolated bacterial strains, after which their 16S rDNA sequences were amplified and analyzed. Phylogenetic analysis was performed to confirm their genetic relationship. The 29 bacterial strains were classified into five groups: phylum Firmicutes (44.8%), Gamma proteobacteria group (27.6%), Alpha proteobacteria group (10.3%), phylum Bacteriodetes (10.3%), and phylum Actinobacteria (6.8%). The most widely distributed genera were Bacillus (phylum Firmicutes), and Marinobacterium, Halomonas, and Vibrio (Gamma proteobacteria group). To confirm the bacterial diversity in rhizospheres of S. japonica, the diversity index was used at the genus level. The results show that bacterial diversity differed at each of the sampling sites. These 29 bacterial strains are thought to play a major role in material cycling at Suncheon Bay, in overcoming the sea/mud flat-specific environmental stress. Furthermore, some strains are assumed to be involved in a positive interaction with the halophyte S. japonica, as rhizospheric flora, with induction of growth promotion and plant defense mechanism.

• The Korean Journal of Mycology
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• v.41 no.2
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• pp.67-73
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• 2013

Microbial diversity of soil samples from ancient stone-lined tombs was investigated. The tombs, discovered at Eoryung Ocheon-Ri site, Korea, were estimated to be belonged to middle class people from an ancient country, Gaya, which existed till AD 559 at the southern part of Korea. Nine fungal stains and 70 bacterial strains were isolated from the twelve soil samples, which were collected from the tomb Nos. 5 and 6. Ribosomal DNA sequence analysis discovered 5 fungal and 22 bacterial strains belonged to 10 genus groups from the tomb No. 5 while 1 fungal and 28 bacterial strains belonged to 6 genus from the tomb No. 6. The higher microbial diversity suggests that the tomb No. 5 was constructed warmer season than the tomb No. 6. Moreover, the discovery of Staphylococcus warneri, which is found as part of the skin flora on human and animals, and Bacillus aquimaris, which is a marine bacterium and can be discovered from tidal flat, from the surface of large dagger suggests that the ancient people may use meat and seafood at the burial ceremony.

• Korean Journal of Environmental Biology
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• v.24 no.1 s.61
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• pp.38-45
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• 2006

Ecological characteristics of microbial populations inhabiting heavy metal polluted soil were investigated. The samples were collected from 293 sites around an factory and industry at Gyeoungsangbuk-do. We measured the contents of seven heavy metal elements (Cd, Cu, As, Hg, Pb, $Cr^{6+}$, CN), seven sites have been seriously contaminated by mercury and chrome. A quantitative evaluation of microbial populations in mercury and chrome contaminated soil was examined by using plate count method. Bacterial numbers in polluted soil samples ranged from $7.4X10^5\;to\;9.3X10^7\;cfu\;g^{-1}$, about $10\sim100$ fold less than the count for the unpolluted soil. Moulds were not detected in chrome polluted soil. The log values of actinomycetes of each contaminated soil samples were log ranged from 6.18 to 7.52. The ratio of actinomycetes was similar to unpolluted soil. The investigation showed actinomycetes to be the major microbial population inhabiting the mercury and chrome polluted soil. Thirty-one isolates among the total isolates were examined for antibacterial activity. These isolates were identified based on a phylogenetic analysis using 16S rRNA gene nucleotide sequences, they were categorized in three major phylogenetic groups, belong to the Streptomyces (6 strains), Saccharopolyspora (3 strains), Nocardiodes (1 strain). On the phylogenetic tree, the clade consisting of five isolates were distantly related to all of the established Streptomycetes genera, indicating the possibility as members of new species.