• 제목/요약/키워드: Single strand

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Hair and Fur Synthesizer via ConvNet Using Strand Geometry Images

  • Kim, Jong-Hyun
    • 한국컴퓨터정보학회논문지
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    • 제27권5호
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    • pp.85-92
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    • 2022
  • 본 논문에서는 라인 형태인 가닥(Strand) 지오메트리 이미지와 합성곱 신경망(Convolutional Neural Network, ConvNet 혹은 CNN)을 이용하여 저해상도 헤어 및 털 시뮬레이션을 고해상도로 노이즈 없이 표현할 수 있는 기법을 제안한다. 저해상도와 고해상도 데이터 간의 쌍은 물리 기반 시뮬레이션을 통해 얻을 수 있으며, 이렇게 얻어진 데이터를 이용하여 저해상도-고해상도 데이터 쌍을 설정한다. 학습할 때 사용되는 데이터는 헤어 가닥 형태의 위치를 지오메트리 이미지로 변환하여 사용한다. 본 논문에서 제안하는 헤어 및 털 네트워크는 저해상도 이미지를 고해상도 이미지로 업스케일링(Upscaling)시키는 이미지 합성기를 위해 사용된다. 테스트 결과로 얻어진 고해상도 지오메트리 이미지가 고해상도 헤어로 다시 변환되면, 하나의 매핑 함수로 표현하기 어려운 헤어의 찰랑거리는(Elastic) 움직임을 잘 표현할 수 있다. 합성 결과에 대한 성능으로 이전 물리 기반 시뮬레이션보다 빠른 성능을 보였으며, 복잡한 수치해석을 몰라도 쉽게 실행이 가능하다.

Characterization of a Positive Regulatory cis-Element and Transacting Factors for the Hepatitis B Viral Pregenomic Promoter

  • Choi, Cheol-Yong;Park, Geon-Tae;Rho, Hyune-Mo
    • BMB Reports
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    • 제29권2호
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    • pp.156-162
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    • 1996
  • Transcription of hepatitis B viral pregenomic promoter is known to be regulated mainly by the combined interaction of enhancers I, II and the intervening regulatory sequences between the two enhancers. A positive regulatory element was identified by serial deletion and measuring the linked chloramphenicol acetyltransferase (CAT) activities, which overlapped with the 5' region of the X open reading frame. When the positive regulatory element was inserted upstream of the SV40 early promoter, it elevated SV40 promoter activity in HepG2 cells. Two cellular proteins of 110 (p110) and 33 (p33) kDa interacted with the positive element and both of them were present in the nucleus, but p110 also existed in the cytoplasm in phosphorylated form. Dephosphorylation of p110 by acid phosphatase enhanced the DNA-binding activity of p110. The p33 could bind to single-strand DNA specifically as well as to double-strand DNA.

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Prediction of the transfer length of prestressing strands with neural networks

  • Marti-Vargas, Jose R.;Ferri, Francesc J.;Yepes, Victor
    • Computers and Concrete
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    • 제12권2호
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    • pp.187-209
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    • 2013
  • This paper presents a study on the prediction of transfer length of 13 mm seven-wire prestressing steel strand in pretensioned prestressed concrete members with rectangular cross-section including several material properties and design and manufacture parameters. To this end, a carefully selected database consisting of 207 different cases coming from 18 different sources spanning a variety of practical transfer length prediction situations was compiled. 16 single input features and 5 combined input features are analyzed. A widely used feedforward neural regression model was considered as a representative of several machine learning methods that have already been used in the engineering field. Classical multiple linear regression was also considered in order to comparatively assess performance and robustness in this context. The results show that the implemented model has good prediction and generalization capacity when it is used on large input data sets of practical interest from the engineering point of view. In particular, a neural model is proposed -using only 4 hidden units and 10 input variables-which significantly reduces in 30% and 60% the errors in transfer length prediction when using standard linear regression or fixed formulas, respectively.

Effects of 60-Hz Time-Varying Electric Fields on DNA Damage and Cell Viability Support Negligible Genotoxicity of the Electric Fields

  • Yoon, Yeo Jun;Li, Gen;Kim, Gyoo Cheon;Lee, Hae June;Song, Kiwon
    • Journal of electromagnetic engineering and science
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    • 제15권3호
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    • pp.134-141
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    • 2015
  • The effect of a 60 Hz time-varying electric field was studied using a facing-electrode device (FED) and a coplanar-electrode device (CED) for further investigation of the genotoxicity of 60 Hz time-varying magnetic field (MF) from preceding research. Neither a single 30-minute exposure to the CED or to the FED had any obvious biological effects such as DNA double strand break (DSB) and apoptosis in cancerous SCC25, and HeLa cells, normal primary fibroblast IMR90 cells, while exposures of 60 Hz time-varying MF led to DNA damage with induced electric fields much smaller than those used in this experiment. Nor did repetitive exposures of three days or a continuous exposure of up to 144 hours with the CED induce any DNA damage or apoptosis in either HeLa or IMR90 cells. These results imply that the solitary electric field produced by time-varying MF is not a major cause of DSBs or apoptosis in cancer or normal cells.

경년열화가 증용량 저이도 송전선의 기계적특성에 미치는 영향 (II) (Effect of Mechanical Properties by a Long Term Operation in High Capacity and Low Sag Conductor ( II ))

  • 김상수;김병걸;신구용;이동일;민병욱
    • 한국전기전자재료학회논문지
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    • 제19권1호
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    • pp.100-106
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    • 2006
  • Today, restricted energy sources, environmental considerations and the high cost of transporting fuel have limited the number and location of available power plant sites. The pressures resulting from these conditions have tended to require the construction of long, high-capacity, high-voltage power lines. it's used to adapt to STACIR/AW(Super Thermal-resistant Aluminum alloy Conductors, aluminum-clad Invar-Reinforced) conductor for coping with these situations. STACIR/AW conductor was formed by the combination of INVAR/AW as the core for low sag and super thermal-resistant aluminum alloy conductor for current capacity increase. increase of temperature by current capacity and long span lines make the susceptible to the deterioration of thermo-mechanical properties(conductivity, tensile strength, E-modulus and twist property et al). In the present work, changes of thermo-mechanical properties with aging have been studied in STACIR/AW $410 mm^2$ conductor with forms of single wire and strand wire.

H-Y 항원 유전자의 클로닝에 관한 연구 III. 생쥐정소 cDNA Library 구성과 유전자의 검색 (Molecular Cloning of H-Y Antigen Gene III. Construction of Mouse Testis cDNA Library and Screening of H-Y Ag Gene)

  • 이정렬;김창규;김종배
    • 한국가축번식학회지
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    • 제17권1호
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    • pp.43-48
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    • 1993
  • These experiments were carried out to construct mouse testis cDNA library and to to seen H-Y Ag gene. Mouse testis was obtained from BALB/c inbreed mouse that was after-born 1 week. Isolation of mouse testis total RNA was carried out by guanidum/cesium choloride, poly(A+) mRNAs were purified by oligo d(T)-cellulose chromatography method. To investigate protein synthesis activity, in-vitro translation carried out by total RNA and poly(A+) mRNA. The products of in-vitro translation were identified in 12.5% PAGE. Single strand DNA and double strand DNA were synthesized from poly(A+) mRNA and purified using phenol/chloroform/isoamylalcohol. Synthesized cDNA was combined with cohesive Eco RI polylinker, its recombination efficiencies were identified by X-gal and IPTG. In the cDNA library, 1$\times$107 phagemids were screened with 32P labelled probe. Hybridization were carried on $65^{\circ}C$ for 16~20hours. And 1$\times$106 phagemids were screened with rabbit-anti-H-Y. In former, select 5 positive clones, and later, 1 positive clone. Its southern blot analysis showed various size of insert cDNA from 0.7kb to 3kb.

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Regulatory Viral and Cellular Elements Required for Potato Virus X Replication

  • Kim, Kook-Hyung
    • The Plant Pathology Journal
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    • 제17권3호
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    • pp.115-122
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    • 2001
  • Potato virus X (PVX) is a flexuous rod-shaped virus containing a single plus-strand RNA. Viral RNA synthesis is precisely regulated by regulatory viral sequences and by viral and/or host proteins. RNA sequence element as well as stable RNA stem-loop structure in the 5' end of the genome affect accumulation of genomic RNA and subgenomic RNA (sgRNA). The putative sgRNA promoter regions upstream of the PVX triple gene block (TB) and coat protein (CP) gene were critical for both TB and CP sgRNA accumulation. Mutations that disrupted complementarity between a region at the 5' end of the genomic RNA and the sequences located upstream of each sgRNA initiation site is important for PVX RNA accumulation. Compensatory mutations that restore complementarity restored sgRNA accumulation levels. However, the extent of reductions in RNA levels did not directly correlate with the degree of complementarity, suggesting that the sequences of these elements are also important. Gel-retardation assays showed that the 5' end of the positive-strand RNA formed an RNA-protein complex with cellular proteins, suggesting possible involvement of cellular proteins for PVX replication. Future studies on cellular protein binding to the PVX RNA and their role in virus replication will bring a fresh understanding of PVX RNA replication.

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Structural Analysis of Plasmid pCL2.1 from Lactococcus lactis ssp. lactis $ML_8$ and the Construction of a New Shuttle Vector for Lactic Acid Bacteria

  • Jeong, Do-Won;Cho, San-Ho;Lee, Jong-Hoon;Lee, Hyong-Joo
    • Food Science and Biotechnology
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    • 제18권2호
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    • pp.396-401
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    • 2009
  • The nucleotide sequence contains 2 open reading frames encoding a 45-amino-acid protein homologous to a transcriptional repressor protein CopG, and a 203-amino-acid protein homologous to a replication protein RepB. Putative countertranscribed RNA, a double-strand origin, and a single-strand origin were also identified. A shuttle vector, pUCL2.1, for various lactic acid bacteria (LAB) was constructed on the basis of the pCL2.1 replicon, into which an erythromycin-resistance gene as a marker and Escherichia coli ColE1 replication origin were inserted. pUCL2.1 was introduced into E. coli, Lc. lactis, Lactobacillus (Lb.) plantarum, Lb. paraplantarum, and Leuconostoc mesenteroides. The recombinant LAB maintained traits of transformed plasmid in the absence of selection pressure over 40 generations. Therefore, pUCL2.1 could be used as an E. coli/LAB shuttle vector, which is an essential to engineer recombinant LAB strains that are useful for food fermentations.

Effect of Low-Energy Electron Irradiation on DNA Damage by Cu2+ Ion

  • Noh, Hyung-Ah;Park, Yeunsoo;Cho, Hyuck
    • Journal of Radiation Protection and Research
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    • 제42권1호
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    • pp.63-68
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    • 2017
  • Background: The combined effect of the low energy electron (LEE) irradiation and $Cu^{2+}$ ion on DNA damage was investigated. Materials and Methods: Lyophilized pBR322 plasmid DNA films with various concentrations (1-15 mM) of $Cu^{2+}$ ion were independently irradiated by monochromatic LEEs with 5 eV. The types of DNA damage, single strand break (SSB) and double strand break (DSB), were separated and quantified by gel electrophoresis. Results and Discussion: Without electron irradiation, DNA damage was slightly increased with increasing Cu ion concentration via Fenton reaction. LEE-induced DNA damage, with no Cu ion, was only 6.6% via dissociative electron attachment (DEA) process. However, DNA damage was significantly increased through the combined effect of LEE-irradiation and Cu ion, except around 9 mM Cu ion. The possible pathways of DNA damage for each of these different cases were suggested. Conclusion: The combined effect of LEE-irradiation and Cu ion is likely to cause increasing dissociation after elevated transient negative ion state, resulting in the enhanced DNA damage. For the decrease of DNA damage at around 9-mM Cu ion, it is assumed to be related to the structural stabilization due to DNA inter- and intra-crosslinks via Cu ion.

Cellular Dynamics of Rad51 and Rad54 in Response to Postreplicative Stress and DNA Damage in HeLa Cells

  • Choi, Eui-Hwan;Yoon, Seobin;Hahn, Yoonsoo;Kim, Keun P.
    • Molecules and Cells
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    • 제40권2호
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    • pp.143-150
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    • 2017
  • Homologous recombination (HR) is necessary for maintenance of genomic integrity and prevention of various mutations in tumor suppressor genes and proto-oncogenes. Rad51 and Rad54 are key HR factors that cope with replication stress and DNA breaks in eukaryotes. Rad51 binds to single-stranded DNA (ssDNA) to form the presynaptic filament that promotes a homology search and DNA strand exchange, and Rad54 stimulates the strand-pairing function of Rad51. Here, we studied the molecular dynamics of Rad51 and Rad54 during the cell cycle of HeLa cells. These cells constitutively express Rad51 and Rad54 throughout the entire cell cycle, and the formation of foci immediately increased in response to various types of DNA damage and replication stress, except for caffeine, which suppressed the Rad51-dependent HR pathway. Depletion of Rad51 caused severe defects in response to postreplicative stress. Accordingly, HeLa cells were arrested at the G2-M transition although a small amount of Rad51 was steadily maintained in HeLa cells. Our results suggest that cell cycle progression and proliferation of HeLa cells can be tightly controlled by the abundance of HR proteins, which are essential for the rapid response to postreplicative stress and DNA damage stress.