• Title/Summary/Keyword: Single sequence

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The complete chloroplast genome sequence of Rhododendron caucasicum (Ericaceae)

  • Myounghai KWAK;Rainer W. BUSSMANN
    • Korean Journal of Plant Taxonomy
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    • v.53 no.3
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    • pp.230-236
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    • 2023
  • Rhododendron caucasicum Pall. is a shrub distributed in the mountainous areas of the Caucasus from northeastern Türkiye towards the Caspian Sea. This study reports the first complete chloroplast genome sequence of R. caucasicum. The plastome is 199,487 base pairs (bp) long and exhibits a typical quadripartite structure comprising a large single-copy region of 107,645 bp, a small single-copy region of 2,598 bp, and a pair of identical inverted repeat regions of 44,622 bp each. It contains 143 genes, comprising 93 protein-coding genes, 42 tRNA genes, and eight rRNA genes. The large chloroplast genome size is likely due to the expansion of inverted repeats. A phylogenetic analysis of chloroplast genomes with other Rhododendron species supports previously recognized infrageneric relationship.

Filtering of spatially invariant image sequences with one desired process

  • Oh, Youngin
    • 제어로봇시스템학회:학술대회논문집
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    • 1992.10b
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    • pp.520-525
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    • 1992
  • This paper reports several mathematical properties of the filter vector developed for processing linearly-additive spatially-invariant image sequences. In this filtering of an image sequence into a single filtered image, the information about the image components originally distributed over the entire sequence is compressed into the one new image in a way that the desired component is enhanced and the undesired (interfering) components and noise are suppressed.

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Construction of a Temperature Controlled Expression Ve e tor in Saccharumy ces cerevisiae (Saccharomyces cerevisiae를 이용한 온도조절형 발현 Vector의 개발)

  • 최진옥;황용일
    • Microbiology and Biotechnology Letters
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    • v.21 no.3
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    • pp.214-220
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    • 1993
  • The mating type a of yeast, Saccharomyces cerevisiae mutant with hmla2-102 and sir3-8ts was changed to type alpha by changing the growth temperature from 25C to 35C. A temperature-sensitive expression vector system was constructed using mating factor alpha1 (Mfalpha1) gene encoding alpha factor which is expressed in the type alpha cells. Vectors with different copy numbers were constructed by joining the promoter and pre or prepro-secretion single sequence of Mfalpha1 to promoterless PHO5' gene as a reporter gene.

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Perspectives on Functional Genomics

  • Song, Kyuyoung
    • Biotechnology and Bioprocess Engineering:BBE
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    • v.5 no.5
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    • pp.307-312
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    • 2000
  • As the first assembly of the human genome was announced on June 26, 2000, we have entered post genome era. The genome sequence represents a new starting point for science and medicine with possible impact on research across the life sciences. In this review I tried to offer brief summaries of history and progress of the Human Genome Project and two major challenges ahead, functional genomics and DNA sequence variation research.

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Minimizing the Weighted Mean Absolute Deviation of Job Completion Times about Two Common Due Dates (두개의 공통납기에 대한 작업완료시간의 W.M.A.D. 최소화에 관한 연구)

  • 오명진;이상도
    • Journal of Korean Society of Industrial and Systems Engineering
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    • v.14 no.24
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    • pp.111-121
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    • 1991
  • This paper considers a non preemtive single processor scheduling problem in which each set have the two common due dates. The objective of the problem is to minimize the weighted mean absolute deviation of job completion times about such two common due dates under the assumption that each job has a different weight. Such a job sequence is an W-shaped sequence. We propose three heuristic solution methods based on several dominance conditions. Numerical examples are presented. The performance comparison is made among three heuristic scheduling procedures.

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Complete Genome Sequence of Bifidobacterium bifidum DS0908, Isolated from Human Fecal Sample

  • Haneol Yang;Yong-Sik Kim;Doo-Sang Park
    • Microbiology and Biotechnology Letters
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    • v.51 no.4
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    • pp.566-568
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    • 2023
  • In this report, we present the whole-genome sequence of Bifidobacterium bifidum DS0908 isolated from the human fecal sample. The genome composed of a single circular chromosome is 2,223,317 bp long and the DNA G+C content is 62.65%. No virulence genes were detected in the genomic sequences of B. bifidum DS0908.

Complete Genome Sequence of the Enterobacter asburiae IK3 Isolated from a Soybean (Glycine max) Rhizosphere

  • Sihyun Park;GyuDae Lee;Ikwhan Kim;Yeongyu Jeong;Jae-Ho Shin
    • Microbiology and Biotechnology Letters
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    • v.51 no.3
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    • pp.306-308
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    • 2023
  • This research presents the whole-genome sequence of Enterobacter asburiae strain IK3, which was isolated from the rhizosphere soil of soybean (Glycine max). The genome of the strain is composed of a single chromosome with 4 plasmids, total size of 5,084,040 bp, and the GC content is 55.5%.

Complete Genome Sequence of Cytobacillus firmus T8, Isolated from the Rhizosphere of Pepper (Capsicum annuum L.)

  • Da-Ryung Jung;GyuDae Lee;Tino Bashizi;Jae-Ho Shin
    • Microbiology and Biotechnology Letters
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    • v.51 no.4
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    • pp.548-550
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    • 2023
  • This study presents the complete genome sequence of Cytobacillus firmus strain T8, which was obtained from the rhizosphere soil of pepper (Capsicum annuum L.). The genome of the strain consists of a single chromosome with a total size of 4,383,751 bp and the GC content of 42%.

Complete Genome Sequence of Weissella koreensis DMW12 Isolated from Kimchi, Traditional Korean Fermented Vegetables

  • Do-Won Jeong
    • Microbiology and Biotechnology Letters
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    • v.52 no.1
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    • pp.91-93
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    • 2024
  • Weissella koreensis DMW12 was isolated from kimchi added Myeongtae (Theragra chalcogramma), and its complete genome sequence was determined. The complete genome of strain DMW12 includes a single circular 1,518,288-bp chromosome without plasmids. The G+C content of the genome is 35.6 mol%. Although strain DMW12 did not showed protease and lipase activities, the genome includes 33 protease- and 3 lipase-encoding genes. The genome of strain DMW12 does not include acquired antibiotic resistance genes against ampicillin, chloramphenicol, clindamycin, erythromycin, gentamicin, kanamycin, tetracycline, and streptomycin.