• 제목/요약/키워드: Simpson Index

검색결과 80건 처리시간 0.028초

벼 건답직파재배(乾畓直播栽培)에 따른 잡초군락(雜草群落)의 변화(變化) (Changes of Weed Flora Under Direct Seeded Rice Cultivation in Dry Paddy Field)

  • 구연충;박광호;오윤진
    • 한국잡초학회지
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    • 제13권2호
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    • pp.159-163
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    • 1993
  • 건답직파(乾畓直播)를 연속(繼續)함에 따라서 야기되는 잡초군락(雜草群落)의 변이양상(變異樣相)을 밝혀 효과적(效果的)인 제초체계(除草體系)를 확립(確立)하고자 수행(遂行)한 결과(結果)는 다음과 같다. 1. 벼 건답직파재배(乾畓直播栽培)를 4년간(年間) 연속재배(連續栽培)한 경우 화본과잡초(禾本科雜草)는 감소(減少)한 반면 광엽잡초(廣葉雜草)는 증가(增加)하였으며 생활형(生活型)으로 보면 1년생잡초(年生雜章)는 증가(增加)하였으나 다년생잡조(多年生雜草)는 감소(滅少)하였다. 2. 기계이앙시(機械移秧時) 우점잡초(優占雜草)는 올방개-피-올챙이고랭이-물달개비 등의 수생잡초(水生雜草)가 우점(優占)하였으나 건답직파재배(乾畓直播栽培)를 연속(繼續)할 경우 피-바랭이-가막사리-조개풀-자귀풀 등의 습생잡초(濕生雜草)가 우점(優占)하였다. 3. 건답직파(乾畓直播)에 따른 초종(草種)의 다양화(多樣化) 정도(程度)(Simpson Index) 및 군락우점도(群落優占度)(Community dominance)를 보면 기계이앙(機械移秧)의 경우 1-2 초종(草種)이 우점화(優占化)되는 경향(傾向)이었으나 건답직파(乾畓直播)의 경우 여러 초종(草種)이 다양(多樣)하게 분포(分布)되어 있었다. 4. 직파재배(直播栽培)에 따른 연도별(年度別) 유이성(類似性) 계수(係數)(Similarity coefficient)를 보면 직파재배(直播栽培)의 첫해는 41%의 유이성(類似性) 계수(係數)를 나타내 기계이앙(機械移秧)과 상당히 달랐으나 4년간(年間) 연속직파재배(連續直播栽培)를 할 경우 67%로 높아졌다. 5. 건답직파(乾畓直播) 첫해인 1979년도(年度) 잡초방임구(雜草放任區)의 잡초(雜草) 건물중(乾物重)은 $m^2$당 61.3g에 벼 수량(收量)은 290kg/10a이었으나 3년후(年後)인 1992년(年)에는 잡초건물중(雜草乾物重)이 293g/$m^2$으로 1979년에 비해 4.7배가 증가(增加)하였으며 벼 수량(收量)은 전무(全無)였다.

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REP-PCR을 이용한 국내 사람과 동물유래 Staphylococcus aureus 분리주의 Molecular Typing (Molecular Typing of Staphylococcus aureus Strains from Domestic Animals and Humans by REP-PCR Analysis)

  • 우용구;김신
    • 미생물학회지
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    • 제41권1호
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    • pp.60-66
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    • 2005
  • 국내산 한우, 흑염소, 돼지, 개, 닭 및 마우스 둥을 포함한 각종 동물과 사람환자에서 분리된 MRSA 균주를 포함하여 총 116주의 S. aureus 균주를 확보하여 이들 균주들의 유전학적 다양성을 분석하고자 시도하였다. 이를 위하여 쉽고, 편리하며 많이 활용되고 있는 PCR을 이용하여, 개별 분석기법에 따른 유전학적 특성을 파악하는 것은 물론 활용한 기법들 중에서 유전자수준에서 가장 효율적이며 뛰어난 감별능력을 지닌 기법을 선발하고자 하는데 궁극적인 목적을 두었다. 이를 위해서 통계학적 인 수치에 따라 객관적인 분석방법으로서 Simpson's index of diversity (SID)를 산출하여 성적상호간을 비교 및 평가하였다. 공시한 총 99 주에 대한 4M primer를 이용한 RAPD 성적에 근거하여 산출한 SID 값은 0.915의 양호한 간이 산출되었다. 같은 방법으로 충 98 주에 대한 RA primer를 이용한 RAPD성적을 토대로 산출한 SID 값은 0.874로 확인되었다. 한편 총 107주에 대한 ERIC-PCR을 수행한 종합분석 성적에서 공시균주들은 모두 10종의 유전형(genotype)으로 구분되었고, EM-type 는 14주가 포함되어 가장 대표적 인 유전형으로 분류되었으며, 이 그룹에는 사람유래의 6주가 포함되어 가장 지배적인 유전형으로 확인되었다. 또한 DNA profile에 근거한 덴드로그람을 작성하고 SID간을 산출하였던 바, SDI 0.929의 신뢰도 높은 성적을 산출하였다. 반면에 공시한 총 108주의 S. aureus균주에 대한 종합적인 REP-PCR 성적에서 모두20종의 유전형으로 세분되었고 RB-type은 17주로 가장 많은 균주가 포함되었다. 작성된 덴드로그람 성적에서 산출한 SID 값은 우리의 연구에서 수행한 PCR에 기초한 유전자 분석기법들 중에서는 가장 높은 0.930으로 확인되었다. 결론적으로 RAPD 기법 중에서는 4M primer를 활용한RAPD가 보다 효율적임을 확인할 수 있었고, REP-PCR과 ERIC-PCR의 양자의 성적은 거의 비슷하여 적용했던 PCR분석기법 중에서는 이들 분석기법이 가장 우수한 감별능력을 확보한 분석법으로 최종 선발할 수 있었다.

과수원(果樹園)의 잡초발생(雜草發生) 동태(動態)와 Oxyfluorfen의 처리시기별(処理時期別) 방제효과(防除效果) (Weed Population Dynamic in Orchard and Their Control by Sequential Application of Oxyfluorfen)

  • 김길웅;권순태;최대웅;이상백;김동균
    • Current Research on Agriculture and Life Sciences
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    • 제4권
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    • pp.22-26
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    • 1986
  • 과수원(果樹園)에 발생(發生)되는 잡초(雜草)의 발생동태(發生動態)를 조사(調査)하고 효과적(效果的)인 방제시기(防除時期)를 확립(確立)코져 시험(試驗)하여 얻어진 약간의 결과(結果)를 요약(要約)하면 다음과 같다. 1. 본(本) 조사지(調査地)에서 여뀌외(外) 27종(種)의 잡초(雜草)가 발생검정(發生檢定)되었다. 2. 시기별(時期別) 발생량(發生量)을 종합(綜合)해 보면 8월(月) 10일(日)의 여뀌 발생량(發生量)이 60.79%로 가장 우점(優占)하였으며 그밖에도 애기매꽃, 둑새풀, 냉이, 속속이풀, 피, 쇠비름, 왕바랭이 등(等)이 그 다음으로 많이 발생(發生)하였다. 3. Simpson's index는 5월(月) 1일(日)에 0.11에서 8월(月) 10일(日)에 0.40으로 크게 증가(增加)하여 여러 종(種)의 잡초종(雜草種)이 비교적(比較的) 고르게 발생(發生)해 있다가 특정잡초(特定雜草)가 크게 우점화(優占化)하는 현상을 보였다. 4. Oxyfluorfen을 3월(月) 25일(日)에 1ha당(當) 5kg(상품량(商品量)) 처리(處理)는 처리후(處理後) 120일(日)까지 93.3%의 높은 방제율(防除率)을 나타내어 적합한 처리시기(處理時期) 및 엽량(葉量)으로 사료(思料)되며 1ha당(當) 3kg을 3월(月) 25일(日)에 처리시(處理時)는 6월말(月末)경에 비선택성(非選擇性) 제초제(除草劑) paraquat을 처리(處理)하면 효과적(效果的)으로 방제(防除)가 가능(可能)한 것으로 나타났다.

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Pulsed-Field Gel Electrophoresis를 이용한 Salmonella enterica subspecies enterica bioserovar Pullorum의 분자유전학적 다양성에 관한 연구 (Genetic Diversity of Salmonella enterica subspecies enterica bioserovar Pullorum using the pulsed-field gel electrophoresis)

  • 우용구;이수화;이철현;이오수;김봉환
    • 대한수의학회지
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    • 제43권1호
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    • pp.77-86
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    • 2003
  • Pullorum disease due to Salmonella enterica subspecies enterica bioserovar Pullorum (S. pullorum) is reported to be an endemic disease in domestic poultry flocks. The pulsed-field gel electrophoresis (PFGE) subtyping method was used to assess the extent of genetic diversity and clonality of most of salmonella serotypes and other diverse bacterial species from animals and environmental samples in worldwide. Nowadays, PFGE has already been evaluated as a gold standards for molecular subtyping of salmonella serotypes compared with other molecular analysis methods. PFGE of XbaI digested chromosomal DNA from 23 strains of S. pullorum gave 5 distinctive pulsotypes (from SXPI to SXPV) with 5% confidence range of Dice coefficients, indicating that PFGE is very discriminative and that multiple clones of S. pullorum have been existed and diffused all of domestic poultry flocks industries since 1995. Two dominant pulsogroups (SXA & SXB) appeared as a major clones in this country, because they had consistently been recovered from diverse sources including both chicken organs and raw feed materials between 1995 and 1998. In addition, the matching percentage of PFGE profiles (PFP) among strains from both chickens and feed ingredients provides indirect evidence of the possible transmission of pullorum disease from contaminated raw feed ingredients for chicken production. In calculating of discrimination index (DI) for PFGE method by Simpson's index, DI was appeared as 0.917. Therefore, this index suggested that the present PFGE would seem to be a desirable and confident molecular typing method for S. pullorum strains. To our knowledge for pullorum disease, this is the first study to compare S. pullorum strains from chicken organs and feed samples using the PFGE.

Tidal Front in the Main Tidal Channel of Kyunggi Bay, Eastern Yellow Sea

  • Lee, Heung-Jae;Lee, Seok;Cho, Cheol-Ho;Kim, Cheol-Ho
    • Journal of the korean society of oceanography
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    • 제37권1호
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    • pp.10-19
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    • 2002
  • The detailed structure of a tidal front and its ebb-to flood variation in the main tidal channel of the Kyunggi Bay in the mid-west coast of Korea were investigated by analyzing CTD data and drifter trajectories collected in late July 1999. A typical tidal front was formed in water about 60 m deep at the mouth of the channel. Isotherms and isohalines in the upper layer above the seasonal pycnocline in the offshore stratified zone inclined upward to the sea surface to form a surface front, while those in the lower layer declined to the bottom front. The location of the front is consistent with $100 S^3/cm^2$ of the mixing index H/U defined by Simpson and Hunter (1974), where H is the water depth and U is the amplitude of tidal current. The potential energy anomaly in the frontal zone varied at an ebb-to flood tidal cycle, showing a minimum at slack water after ebb but a maximum at slack water after flood. This ebb-to flood variation in potential energy anomaly is not accounted for by the mixing index. We conclude that on- and offshore displacement of the water column by tidal advection is responsible for the ebb-to-flood variation in the frontal zone.

Effects of dietary fiber levels on cecal microbiota composition in geese

  • Li, Yanpin;Yang, Haiming;Xu, Lei;Wang, Zhiyue;Zhao, Yue;Chen, Xiaoshuai
    • Asian-Australasian Journal of Animal Sciences
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    • 제31권8호
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    • pp.1285-1290
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    • 2018
  • Objective: This study shows the effects of dietary fiber levels on cecal microbiota composition in geese at day 70 according to pyrosequencing of the 16S ribosomal RNA gene. Methods: A total of 468 1-day-old healthy male Yangzhou goslings with similar body weight were randomly divided into 3 groups with 6 replicates per group and 26 geese per replicate. Geese were fed diets with fiber levels of 2.5% (low fiber level diet, Group I) and 6.1% (Group III) during days 1-70, respectively, or 4.3% for days 1-28 and 6.1% for days 29-70 (Group II). Results: Low fiber level diet decreased body weight, average daily gain during, increased lower feed conversation rate of geese during day 1 to 70 (p<0.05). Low fiber level diet decreased the total operational taxonomic units, Chao1 index and Shannon index, whereas increased the Simpson index of cecal microbiota in geese at day 70. Low fiber level diet decreased the relative abundance of Bacteroidetes, Firmicutes, Bacteroides, and Paraprevotella in cecum of geese at day 70. The similarity of cecal microbiota between low fiber level diet group and other groups was smaller. Conclusion: This study indicates that the low fiber level diet decreased diversity of microbiota, and relative abundance of some beneficial microbiota in cecum of geese at day 70, implying that the low fiber level diet has negative influence on performance by altering the diversity and population of cecal microbiota in geese.

Some Proposed Indices of Structural Regeneration of Secondary Forests and Their Relation to Soil Properties

  • Aweto, Albert Orodena
    • Journal of Forest and Environmental Science
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    • 제37권4호
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    • pp.292-303
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    • 2021
  • Studies that relate the structure of tropical regrowth vegetation to soil properties are generally lacking in the literature. This study proposes three indices for assessing the structural regeneration of secondary forests. They are: (1) the tree diameter class, (2) the plant life form and (3) the woody/herbaceous plants ratio indices. They were applied to assess the regeneration status of forest regrowth vegetation (aged 1-10 years), derived savanna regrowth vegetation in south western Nigeria, and to secondary forests in different stages of succession in Columbia and Venezuela, Bolivia, Mexico in South and Central America and semi-arid savanna in Ethiopia and seasonal deciduous forest successional stages in India. In all the cases, the indices increased with increasing age of regrowth vegetation and hence, with increasing structural complexity of regenerating vegetation. The tree diameter class index increased from 32.1% in a 9-year secondary forest to 69.0% in an 80-year-old secondary forest in Columbia and Venezuela and from 0.4% in a 1-year fallow to 20.9% in 10-year regrowth vegetation in southwestern Nigeria. In semi-arid savanna in northern Ethiopia, the woody/herbaceous plants ratio index increased from 18.1% in a 5-year protected grazing enclosure to 75.1% in 15-year protected enclosure, relative to the status of 20-year enclosure. The indices generally had correlations of 0.6-0.90 with species richness and Simpson's/Margalef's species diversity, implying that they are appropriate measures of ecosystem development over time. The proposed indices also had strong and positive correlations with soil organic carbon and nutrients. They are therefore, significant indicators of fertility status.

Status, Distribution, Conservation and Use Value of Medicinal and Aromatic Plants (MAPs) in Sagarmatha National Park, Nepal

  • Gaire, Damodar
    • Journal of Forest and Environmental Science
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    • 제30권3호
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    • pp.253-258
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    • 2014
  • The study attempts to assess the status, distribution, conservation and use value of Medicinal and Aromatic Plant (MAPs) in the Sagarmatha National Park. Altogether 62 species of MAPs belonging to 47 genera and 33 families have been recorded in the study area. 10 species, belonging to 9 families are categorized as the potential species. Out of the these species, most potential in local but threatened species are Allium hypsistum Stearn, Cordyceps sinensis Sacc, Dactylorhiza hatagirea Soo, Nardostachys grandiflora DC, Aconitum orochryseum, Ephedra gerardiana Wall. Ex. Stapf, Swertia multicaulis D. Don, Picrorhiza scrophulariflora Penne, Rheum australe. D. Don, Malva verticillataL and Swertia pedicallata Benerji. By analysis of data using Simpson's diversity index (SI) and Shannon weaver function (H'), there was high diversity (more heterogeneous) MAPs species composition in the Manjo Gate to Large Dobhan. (0.98349). Less diversity (less heterogeneous) MAPs species composition was in Tyanboche to Pangoche (0.90419). Similarly, the Shannon weaver function shows that in plots laying out in Mongla to Phorche are evenly distributed than others However, higher MAPs species (i.e., 31) was found in the way of Manjo Gate to Larja Dobhan than others.

Physical Properties of Soils in Relation to Forest Composition in Moist Temperate Valley Slopes of the Central Western Himalaya

  • Sharma, C.M.;Gairola, Sumeet;Ghildiyal, S.K.;Suyal, Sarvesh
    • Journal of Forest and Environmental Science
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    • 제26권2호
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    • pp.117-129
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    • 2010
  • The present study was undertaken in moist temperate forest of Mandal-Chopta area in the Garhwal region of Uttarakhand, India. The aim of the present study was to assess the physical properties of soils in relation to the forest structure and composition. Twelve forest types according to the altitude, slope aspect and species compositions were selected for the study. Physical properties of soil i.e., soil colour, soil texture (per cent of sand, silt and clay), moisture content, water holding capacity, porosity, bulk density (gm/$cm^3$) and void ratio were analyzed for three different depths viz., (i) 'upper' (0-10 cm), (ii) 'middle' (11-30 cm) and (iii) 'lower' (31-60 cm) in all the selected forest types. Phytosociological and diversity parameters viz. total basal cover ($Gha^{-1}$), stem density ($Nha^{-1}$), tree species richness, Simpson concentration of dominance and Shannon-Wiener diversity index were also calculated for each forest type. This study also provides the comparisons between the results of physical analysis of the present study with numerous other previous studies in the temperate Himalayan region of the Uttarakhand.

Monitoring of Microbial Diversity and Activity During Bioremediation of Crude Oil-Contaminated Soil with Different Treatments

  • Baek, Kyung-Hwa;Yoon, Byung-Dae;Kim, Byung-Hyuk;Cho, Dae-Hyun;Lee, In-Sook;Oh, Hee-Mock;Kim, Hee-Sik
    • Journal of Microbiology and Biotechnology
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    • 제17권1호
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    • pp.67-73
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    • 2007
  • The present study compared the microbial diversity and activity during the application of various bioremediation processes to crude oil-contaminated soil. Five different treatments, including natural attenuation (NA), biostimulation (BS), biosurfactant addition (BE), bioaugmentation (BA), and a combined treatment (CT) of biostimulation, biosurfactant addition, and bioaugmentation, were used to analyze the degradation rate and microbial communities. After 120 days, the level of remaining hydrocarbons after all the treatments was similar, however, the highest rate (k) of total petroleum hydrocarbon (TPH) degradation was observed with the CT treatment (P<0.05). The total bacterial counts increased during the first 2 weeks with all the treatments, and then remained stable. The bacterial communities and alkane monooxygenase gene fragment, alkB, were compared by denaturing gradient gel electrophoresis (DGGE). The DGGE analyses of the BA and CT treatments, which included Nocardia sp. H17-1, revealed a simple dominant population structure, compared with the other treatments. The Shannon-Weaver diversity index (H') and Simpson dominance index (D), calculated from the DGGE profiles using 16S rDNA, showed considerable qualitative differences in the community structure before and after the bioremediation treatment as well as between treatment conditions.