• 제목/요약/키워드: Serratia marcescens S3-R1

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벼 뿌리 내생 항균성 Serratia marcescens의 분리 및 동정 (Isolation and Identification of Rice Root Endophytic Antagonistic Serratia marcescens)

  • 이숙경;송완엽;김형무
    • 식물병연구
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    • 제10권1호
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    • pp.63-68
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    • 2004
  • 벼에서 문제시되는 도열병과 잎집무의마름병을 생물학적으로 방제하기 위해 병원균과 생태학적 지위가 비슷한 벼 뿌리에서 내생하는 S. marcescens 23 균주를 분리하였다. 선발 균주들을 공시하여 R. solani와 P. grisea에 대한 길항능력을 검정하여 R. solani와 P. grisea에 각각 83.9%. 88.3%의 높은 억제율을 보인 RSm220 균주를 선발하였다. 선발된 RSm220은 생리ㆍ생화학적 특성 검정결과 S. marcescens type strain과 높은 상관성을 나타내었고. 16S rDNA sequencing에 의한 계통 분석에 의해 S. marcescens의 16S rDNA sequence에 98.2% 유사성을 나타내어 S. marcescens로 동정되었다 내생성 S. marcescens RSm220은 벼 도열병과 잎집무늬마름병에 대한 생물학적 방제제로의 사용이 가능할 것으로 사료된다.

Serratia marcescens S3-R1이 생산한 효소에 의한 유청단백질 가수분해물의 특성과 면역조절 활성 (Whey protein hydrolytic properties and its immunomodulation activity by produced enzyme from Serratia marcescens S3-R1)

  • 유재민;렌친핸드;정석근;배형철;남명수
    • 농업과학연구
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    • 제40권3호
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    • pp.221-226
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    • 2013
  • Degrees of hydrolysis by alkaline protease produced from Serratia marcescens S3-R1 is 3.95-6.30% of whey proteins during 5, 15, 30, 60, 90, 120,180, 240 min incubation at $40^{\circ}C$. Proteolytic pattern of the whey proteins showed that various low molecular weight peptides were generated during the incubation periods. The biological function of in Raw 264.7 cells treated with whey protein hydrolytic peptides, anti-inflammatory effect showed exhibit in the expression of pro-inflammatory cytokines such as TNF-${\alpha}$, IL-6, COX-2 and iNOS by PCR analysis. COX-2 and iNOS gene expression inhibited in Raw 264.7 cells on whey protein hydrolysates below 3,000 dalton. The protease from Serratia marcescens S3-R1 showed a potential in production of low molecular weight whey protein hydrolysates which could be used for industrial application.

Molecular Cloning and Functional Expression of esf Gene Encoding Enantioselective Lipase from Serratia marcescens ES-2 for Kinetic Resolution of Optically Active (S)-Flurbiprofen

  • Lee, Kwang-Woo;Bae, Hyun-Ae;Lee, Yong-Hyun
    • Journal of Microbiology and Biotechnology
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    • 제17권1호
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    • pp.74-80
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    • 2007
  • An enantioselective lipase gene (esf) for the kinetic resolution of optically active (S)-flurbiprofen was cloned from the new strain Serratia marcescens ES-2. The esf gene was composed of a 1,845-bp open reading frame encoding 614 amino acid residues with a calculated molecular mass of 64,978 Da. The lipase expressed in E. coli was purified by a three-step procedure, and it showed preferential substrate specificity toward the medium-chain-length fatty acids. The esf gene encoding the enantioselective lipase was reintroduced into the parent strain S. marcescens ES-2 for secretory overexpression. The transformant S. marcescens BESF secreted up to 217kU/ml of the enantioselective lipase, about 54-fold more than the parent strain, after supplementing 3.0% Triton X-207. The kinetic resolution of (S)-flurbiprofen was carried out even at an extremely high (R,S)-flurbiprofen ethyl ester [(R,S)-FEE] concentration of 500 mM, 130 kU of the S. marcescens ES-2 lipase per mmol of (R,S)-FEE, and 1,000 mM of succinyl ${\beta}-cyclodextrin$ as the dispenser at $37^{\circ}C$ for 12h, achieving the high enantiomeric excess and conversion yield of 98% and 48%, respectively.

Identification and Characterization of Ligninolytic Enzyme by Serratia marcescens HY-5 isolated from the Gut of Insect

  • 김기덕;신동하;손광희;박호용
    • 한국생물공학회:학술대회논문집
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    • 한국생물공학회 2002년도 생물공학의 동향 (X)
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    • pp.473-476
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    • 2002
  • A lignin degradation bacteria, symbiotic bacteria was isolated from the gut of Sympetrum depressiusculum and tested for its lignin degrading activity using lignin model compounds and related aromatic compounds. The strain was identified as Serratia marcescens HY-5 based on the 165 rDNA, cellular fatty acid composition, biochemical and physiological characteristics. S. marcescens showed 40-50% lignin degrading activity in the media that contained vaillin, guaiacol and dealkaline lignin. S. marcescens showed three ligninase activities [Jaccase, lignin peroxidase(LiP) and Manganase peroxidase(MnP)]. Addition of dealkaline lignin to the basal media increased about 6fold of laccase activity. Vanillic acid or vanillin increase 1.3fold of MnP activity and p-coumaric acid increased 12fold of LiP activity which added to the basal medium.

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식물(植物) 병원류(病源惟) 사상균(絲狀菌)에 길항력(拮抗力)을 갖는 Serratia marcescens CK-3의 분리(分離) 및 효소적(酵素的) 성질(性質) (Isolation of Serratia marcescens CK-3 against phytopathogenic fungi and its enzymatic properties)

  • 김영일;이영환;김광식;박화성;전우복;이재화;김종현
    • Applied Biological Chemistry
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    • 제34권1호
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    • pp.54-60
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    • 1991
  • 식물 병원성 사상균 세포벽의 주성분인 chitin을 분해하는 미생물을 토양에서 분리, 선발하여 동정하고 이들의 효소적 성질을 조사하였다. 선발균 Serratia (S) marcescens는 식물 병원성 사상균인 Fusarium (F) axysporum과 Rhizoctomia (R) solani에 대해 길항력은 갖고 있었으며 효소적으로 chitinase 외에 laminarinase 및 protease 등의 활성을 가지고 있었다. 선발 균주의 chitinase 생산 최적조건은 chitin broth 기본배지의 조성과 온도 및 배양시간을 변형하여 조사한 결과 colloidal chitin 1.5%, tryptone 0.5%, glucose 1%, peptone 0.2%, $MgSO_4{\cdot}7H_2O\;0.1%,\;K_2HPO_4\;0.1%,\;NaCl\;0.1%$ (w/v), pH 6.8 배지에서 $30^{\circ}C$, 72시간 배양하였을 때이었으며 효소의 in vitro 최적 활성조건은 pH 7.5, $50^{\circ}C$이었다. 한편 여러 무기이온 중에서 $Ag^+$$Mn^{++}$은 효소의 활성을 촉진시켰다.

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Bisphenol A 분해세균의 분리 및 특성 (Isolation and Characterization of Bacteria Capable of Degrading Bisphenol A)

  • 김희식;이영기;이완석;박찬선;윤병대;오희목
    • 미생물학회지
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    • 제37권3호
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    • pp.189-196
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    • 2001
  • 내분비계 장애물질로 잘 알려진 bisphenol A (BPA)를 단일탄소원으로 이용하여 균체성장을 나타내는 미생물 87주를 공단주변의 토양, 폐수 혹은 활성슬러지로부터 분리하였다. 분리된 균주 중 균체성장이 우수한 균주 8중을 2차 분리하였으며, 이 중 BPA분해효율이 뛰어난 3종의 균주를 BPA분해미생물로 최종 선별하였다. 최종 선별된 3종의 균주를 16s rDNA의 부분적 염기서열 및 형태학적, 생리학적 특성조사를 통해 Serratia maycescens 1901, S, marcescens 1902 그리고 Pseudomanas putida 1401로 동정되었다. BPA분해능은 HPLC분석을 통해 배양액중의 잔존 BPA 농도로 측정하였으며, 최종 선별된 3종의 균주를 대상으로 BPA가 100 mg/1흑은 500 mg/l의 농도로 포함된 최소 무기염 배지(PAS) 및 비타민을 포함하는 PAS인 PAV 배지에서 배양하여 BPA 분해능을 조사한 결과 20-40%의 분해효율을 나타내었다. 이들 균주의 균체성장은 PAS 배지에서 보다 PAV배지에서 우수하였다. S. marcescens 1901은 저농도(100 mg/l) BPA에서 분해효율이 다른 2종의 균주보다 우수하였고, S. marcescens 1902와 P. putida 1401은 고농도(500 mg/l)에서 BPA분해효율이 높았다. 선별된 3균주의 순수배양과 흔합배양에 의한 BPA분해효율을 비교한 결과, 유의한 차이는 나타나지 않았다.

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Identification and Characterization of Bdellovibrio bacteriovorus, a Predator of Burkholderia glumae

  • Song, Wan-Yeob
    • Journal of Microbiology and Biotechnology
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    • 제14권1호
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    • pp.48-55
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    • 2004
  • Six strains of an obligate predatory bdellovibrio isolate that preys on Burkholderia glumae in rice paddy field water and rhizosphere soil, were identified and characterized. The numbers of Bdellovibrio cells varied from $3.2{\times}10^3$ to $9.2{\times}10^3$ plaque-forming unit/g after enrichment in cells of B. glumae. Prey range tests with six Bdellovibrio strains and 17 prey strains of rice-pathogenic, antibiosis-related, or nitrogen-fixing bacteria resulted in unique predation patterns in related prey cells. Strain BG282 had the widest prey range on 7 plant pathogenic bacteria among the 17 prey strains tested. However, no predation occurred with strains of Azospirillum brasilense, Paenibacillus polymyxa, Pseudomonas fluorescens, P. putida, and Serratia marcescens that are associated with antibiosis or nitrogen fixation in the rice ecosystem. Identification was confirmed by the presence of typical bdelloplast in the prey cells of B. glumae and by a PCR assay using B. bacteriovorus-specific primers. Furthermore, 16S rDNA sequencing of the six bdellovibrio strains showed a homology range of 97.2% to 99.2% to the type strain of B. bacteriovorus.

Molecular Characterization and Prevalence of 16S Ribosomal RNA Methylase Producing Bacteria in Amikacin Resistant Gram-negative Bacilli Isolated from Clinical Specimens

  • Shin, Kyung-A;Hwang, Seock-Yeon;Hong, Seung-Bok
    • 대한의생명과학회지
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    • 제18권3호
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    • pp.299-306
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    • 2012
  • Recently, the prevalence of 16S rRNA methylase conferring high-level resistance to aminoglycosides has been increasing in Gram-negative bacilli globally. We determined the prevalence and genotype of these methylase-producing bacteria, and characterized the co-resistance to ${\beta}$-lactam antibiotics and quinolone in Gram-negative clinical isolates collected in 2010 at a hospital in Korea. Among 65 amikacin-resistant isolates screened from 864 Gram-negative bacilli (GNB), 16S rRNA methylase genes were detected from 49 isolates, including Acinetobacter baumannii (43), Klebsiella pneumoniae (2), Proteus mirabilis (2) and Serratia marcescens (1), Empedobacter brevis (1). All of the 16S rRNA methylase genotype was armA and no variant sequences of amplified PCR products for armA were noted. The 16S rRNA methylase producing bacteria showed much higher resistance to aminoglycoside for Enterobacteriaceae and glucose non-fermenting (NF)-GNB and to imipenem for glucose NF-GNB, than the non-producing isolates. All of the 16S rRNA methylase producing Enterobacteriaceae had the extended-spectrum-${\beta}$-lactamase. In addition, two K. pneumoniae concurrently produced both plasmid-mediated AmpC ${\beta}$-lactamase and qnrB gene. All of the amikacin-resistant A. baumannii (43) co-harbored armA 16S rRNA methylase and $bla_{OXA-23}$ carbapenemase. In conclusion, 16S rRNA methylase producing bacteria were very prevalent among GNB in South Korea, and were commonly associated with co-resistance, including carbapenem and quinolone.

Occurrence and antibiotic susceptibility of fish bacteria isolated from Oreochromis niloticus (Nile tilapia) and Clarias gariepinus (African catfish) in Uganda

  • Wamala, S.P.;Mugimba, K.K.;Mutoloki, S.;Evensen, O.;Mdegela, R.;Byarugaba, D.K.;Sorum, H.
    • Fisheries and Aquatic Sciences
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    • 제21권2호
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    • pp.6.1-6.10
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    • 2018
  • The intention of this study was to identify the bacterial pathogens infecting Oreochromis niloticus (Nile tilapia) and Clarias gariepinus (African catfish), and to establish the antibiotic susceptibility of fish bacteria in Uganda. A total of 288 fish samples from 40 fish farms (ponds, cages, and tanks) and 8 wild water sites were aseptically collected and bacteria isolated from the head kidney, liver, brain and spleen. The isolates were identified by their morphological characteristics, conventional biochemical tests and Analytical Profile Index test kits. Antibiotic susceptibility of selected bacteria was determined by the Kirby-Bauer disc diffusion method. The following well-known fish pathogens were identified at a farm prevalence of; Aeromonas hydrophila (43.8%), Aeromonas sobria (20.8%), Edwardsiella tarda (8.3%), Flavobacterium spp. (4.2%) and Streptococcus spp. (6.3%). Other bacteria with varying significance as fish pathogens were also identified including Plesiomonas shigelloides (25.0%), Chryseobacterium indoligenes (12.5%), Pseudomonas fluorescens (10.4%), Pseudomonas aeruginosa (4.2%), Pseudomonas stutzeri (2.1%), Vibrio cholerae (10.4%), Proteus spp. (6.3%), Citrobacter spp. (4.2%), Klebsiella spp. (4.2%) Serratia marcescens (4.2%), Burkholderia cepacia (2.1%), Comamonas testosteroni (8.3%) and Ralstonia picketti (2.1%). Aeromonas spp., Edwardsiella tarda and Streptococcus spp. were commonly isolated from diseased fish. Aeromonas spp. (n = 82) and Plesiomonas shigelloides (n = 73) were evaluated for antibiotic susceptibility. All isolates tested were susceptible to at-least ten (10) of the fourteen antibiotics evaluated. High levels of resistance were however expressed by all isolates to penicillin, oxacillin and ampicillin. This observed resistance is most probably intrinsic to those bacteria, suggesting minimal levels of acquired antibiotic resistance in fish bacteria from the study area. To our knowledge, this is the first study to establish the occurrence of several bacteria species infecting fish; and to determine antibiotic susceptibility of fish bacteria in Uganda. The current study provides baseline information for future reference and fish disease management in the country.