• Title/Summary/Keyword: Sclerotinia

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Multiplex TaqMan qPCR Assay for Detection, Identification, and Quantification of Three Sclerotinia Species

  • Dong Jae Lee;Jin A Lee;Dae-Han Chae;Hwi-Seo Jang;Young-Joon Choi;Dalsoo Kim
    • Mycobiology
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    • v.50 no.5
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    • pp.382-388
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    • 2022
  • White mold (or Sclerotinia stem rot), caused by Sclerotinia species, is a major air, soil, or seed-transmitted disease affecting numerous crops and wild plants. Microscopic or culture-based methods currently available for their detection and identification are time-consuming, laborious, and often erroneous. Therefore, we developed a multiplex quantitative PCR (qPCR) assay for the discrimination, detection, and quantification of DNA collected from each of the three economically relevant Sclerotinia species, namely, S. sclerotiorum, S. minor, and S. nivalis. TaqMan primer/probe combinations specific for each Sclerotinia species were designed based on the gene sequences encoding aspartyl protease. High specificity and sensitivity of each probe were confirmed for sclerotium and soil samples, as well as pure cultures, using simplex and multiplex qPCRs. This multiplex assay could be helpful in detecting and quantifying specific species of Sclerotinia, and therefore, may be valuable for disease diagnosis, forecasting, and management.

Sclerotinia Rot of Astragalus sinicus Caused by Sclerotinia trifoliorum (Sclerotinia trifoliorum에 의한 자운영 균핵병)

  • Kwon, Jin-Hyeuk;Lee, Heung-Su;Lee, Yong-Hwan;Shim, Hong-Sik
    • Research in Plant Disease
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    • v.16 no.1
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    • pp.90-93
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    • 2010
  • Sclerotinia rot occurred sporadically on the stems and leaves of Astragalus sinicus in the farmers fields at Goseong-gun, Gyeongnam province in Korea. The infected plants showed the typical symptoms: watersoaked, wilt, rot, blight and eventual death. The colony of the isolated fungus on potato-dextrose agar (PDA) was white to faintly gray color. Sclerotia formed on the PDA were globose in shape, black in color and $2{\sim}14{\times}2{\sim}7mm$ in size. The optimum temperature for mycelial growth and sclerotium formation was at $20^{\circ}C$ on PDA. Apothecia formed on PDA were globose~disk in shape and 3~8 mm in size. Asci were cylindrical in shape and $145{\sim}210{\times}10{\sim}12{\mu}m$ in size. Ascospores were ellipsoid and $10{\sim}14{\times}6{\sim}7{\mu}m$ in size. On the basis of mycological characteristics and pathogenicity test on host plants, the fungus was identified as Sclerotinia trifoliorum Eriksson. This is the first report on sclerotinia rot of A. sinicus caused by Strifoliorum Eriksson in Korea.

Sclerotinia Rot of Broad Bean (Vicia faba) Caused by Sclerotinia sclerotiorum (Sclerotinia sclerotiorum에 의한 잠두 균핵병)

  • Kwon, Jin-Hyeuk;Bae, Yeoung-Seuk
    • Research in Plant Disease
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    • v.13 no.2
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    • pp.115-118
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    • 2007
  • Sclerotinia rot occurred on the stem and pod of broad bean (Vicia faba) at Gyeongsangnam-do Agricultural Research and Extension Services in Korea from 2004 to 2006. The infected plants showed the typical symptoms; wilted, water-soaked, rotted and eventually died. The colony of the isolated fungus on PDA was white to faintly gray color. Apothecia were cup-shaped and $5{\sim}10\;mm$ in size. Asci were cylindrical in shape and $90{\sim}180{\times}8{\sim}12\;{\mu}m$ in size. Ascospores were ellipsoid and $8{\sim}12{\times}4{\sim}6\;{\mu}m$ in size. Sclerotia formed on the PDA were globose to cylindrical or irregular in shape with black color. The optimum temperature for mycelial growth was $25^{\circ}C$ and sclerotia formation was at $20^{\circ}C$ on PDA. This is the first report on sclerotinia rot of broad bean (Vicia faba) caused by Sclerotinia sclerotiorum (Lib.) do Bary in Korea.

Sclerotinia Rot of Obedient plant (Physostegia virginiaqna) Caused by Sclerotinia sclerotiorum (Sclerotinia sclerotiorum에 의한 꽃범의 꼬리 균핵병)

  • Kwon, Jin-Hyeuk;Park, Chang-Seuk
    • Research in Plant Disease
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    • v.9 no.1
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    • pp.28-31
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    • 2003
  • A sclerotinia rot was occurred on the stems of Obedient plant (Physostegia virginiaqna) grown in the exhibition field of Gyeongsangnam-do Agricultural Research and Extension Services, Korea in 2002. The typical symptoms of the disease were that the infected leaves and stems, at first, became dark green, then watery and soft rotted, later, White fluffy mycelia formed on the lesion developed black sclerotia, later, Sclerotia formed on the plants and PDA medium were globose to cylindrical or irregular in shape and 1.0~10.3$\times$1.0~8.4 mm in size. Aphothecia were cup-shape with numerous asci and 0.8~1.8 cm in diameter, Asci were cylindrical in shape and 84~286$\times$4.7~26.3 ${\mu}{\textrm}{m}$ in size. Ascospores were one cell hyaline, ellipsoid to ovoid in shape, and 7.6~12.8$\times$3.4~6.2 ${\mu}{\textrm}{m}$ in size. The optimum temperature far mycelial growth was $25^{\circ}C$. This is the first report on the sclerotinia rot of Physostegia virginiaqna caused by Sclerotinia sclerotiorum in Korea.

Sclerotinia Rot of Fatsia japonica Caused by Sclerotinia sclerotiorum (Sclerotinia sclerotiorum에 의한 팔손이 균핵병)

  • Kwon Jin-Hyeuk
    • Research in Plant Disease
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    • v.12 no.2
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    • pp.122-124
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    • 2006
  • Sclerotinia rot was occurred on the leaf and stem of Fatsia japonica in Geoje city, Gyeongnam province in Korea from 2004 to 2005. The typical symptom of the disease was water-soaked infected leaves and stems. The colony of the isolated fungus was white to faintly gray in color. Apothecia were cup-shaped with numerous asci and $0.8{\sim}1.3 cm$ in size. Asci were cylindrical in shape and $70{\sim}220{\times}4{\sim}18{\mu}m$ in size. Ascospores were aseptate, hyaline, ellipsoid in shape, and $6{\sim}12{\times}4{\sim}6{\mu}m$ in size. Sclerotia formed on the plants and PDA medium were globose to cylindrical or irregular in shape, black in color. The optimum temperature for mycelial growth was $25^{\circ}C$. This is the first report on the Sclerotinia rot of Fatsia japonica caused by Sclerotinia sclerotiorum in Korea.

Sclerotinia Rot of Peucedanum japonicum Thunb. Caused by Sclerotinia sclerotiorum (Sclerotinia sclerotiorum에 의한 갯기름나물 균핵병 발생)

  • Jung, Won-Kwon;Lim, Yang-Sook;Kim, Min-Ki;Kim, Jong-Su
    • Research in Plant Disease
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    • v.27 no.3
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    • pp.115-119
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    • 2021
  • Sclerotinia rot was occurred on the leaf and stem of Peucedanum japonicum Thunb. in greenhouse field of Pohang city of Gyeongbuk province in Korea. The typical symptom of the disease was light brown spot and tipburn on infected leaves. The colony of the isolated fungus was white to light gray in color. Asci were cylindrical shape and 75-240×5.9-17.3 ㎛ in size. Apothecia were cup-shaped with numerous asci and 0.5-0.9 cm in size. Ascospores were aseptate and ellipsoid in shape, and 8.4-10.7×4.8-5.8 ㎛ in size. Sclerotia formed on the plants and potato dextrose agar medium were globose to irregular in shape and black in color. Partial sequencing of rDNA of this isolate showed that it was 100% consistent with that of Sclerotinia sclerotiorum. It was confirmed that the same lesion was formed by reinoculating this pathogen on a healthy P. japonicum Thunb. and the same strain was isolated. This is the first report on the Sclerotinia rot of P. japonicum Thunb. caused by S. sclerotiorum in Korea.

First Report of Sclerotinia White Rot Caused by Sclerotinia nivalis on Panax ginseng in Korea

  • Cho, Hye Sun;Shin, Jeong-Sup;Kim, Jae-Hyun;Hong, Tae-Kyun;Cho, Dae-Hui;Kang, Je Yong
    • Research in Plant Disease
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    • v.19 no.1
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    • pp.49-54
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    • 2013
  • Sclerotinia white rot disease was observed on 5 and 6-year-old ginseng (Panax ginseng) roots in Hongchun, Cheorwon, and Yanggu, Gangwon Province, Korea from 2006 to 2010. Symptoms included a brownish watery soft rot of the roots, and black sclerotia were often found on the rotten roots. The causal agent of the disease was identified as Sclerotinia nivalis based on cultural characteristics and sequence analyses of the internal transcribed spacer region of rDNA and ${\beta}$-tubulin gene with 100% sequence similarity. Pathogenicity tests were performed on 2-year-old ginseng roots with mycelium plugs without wounds. A watery soft rot of the roots and black sclerotia were observed 10 days after inoculation. These symptoms were identical to those observed on naturally infected roots. The same fungus was re-isolated from the lesions induced by artificial inoculation. This is the first report of sclerotinia white rot caused by S. nivalis on P. ginseng in Korea.

Occurrence of Sclerotinia Rot in Cruciferous Crops Caused by Sclerotinia spp.

  • Kim, Wan-Gyu;Cho, Weon-Dae
    • The Plant Pathology Journal
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    • v.19 no.1
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    • pp.69-74
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    • 2003
  • Cruciferous crops grown in greenhouses and fields in Korea were surveyed from 1995 to 2000. Sclerotinia rot most severely occurred up to 30% in cabbage. Incidence of the disease was as high as 20% at its maximum in Chinese cabbage and rape and 10% in radish, but as low as less than 1 or 2% in broccoli and kale. Symptoms of Sclerotinia rot commonly developed on loaves and stems of the crucifers, but rarely on rachises of broccoli. A total of 112 isolates of sclerotinia species was obtained from the diseased crucifers. Out of the isolates, 103 isolates were identified as S. sclerotiorum, and the rest as 5. minor based on their morphological and cultural characteristics. S. sclerotiorum was isolated from all the crucifers, while S. minor was isolated from Chinese cabbage, broccoli, and kale. Six isolates of S. sclerotiorum and three isolates of S. minor were tested for their pathogenicity to the crucifers by artificial inoculation. All the isolates of the two Sclerotinia spp. induced rot symptoms on the plants of the crucifers tested, which were similar to those observed in the fields. The pathogenicity tests revealed that there was no significant difference in the susceptibility of the crucifers to the isolates of S. sclerotiorum. However, in case of S. minor, radish was relatively less susceptible to the pathogen.

Sclerotinia Rot on Water Cress (Oenanthe javanica) Caused by Sclerotinia sclerotiorum (Sclerotinia sclerotiorum에 의한 미나리 균핵병)

  • Kwon, Jin-Hyeuk;Shen, Shun-Shan;Park, Chang-Seuk
    • Research in Plant Disease
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    • v.9 no.2
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    • pp.85-88
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    • 2003
  • A sclerotinia rot of Water cress (Oenanthe javanica) occurred in the commerical farmers field at Garye-myon, Uiryeong-gun, Gyeongnam Province, Korea, 2002. The typical symptoms appeared on leaves and stems. At first, the infected leaves or stems turned dark green later become watery soft rotted; white fluffy mycelia grew from the lesion, later formed black sclerotia. Sclerotia on the infected plants and PDA medium were globose to cylindrical or irregular in shape and 1.0~10.7 ${\times}$1.0~7.6 mm in size. Cup-shaped aphothecia with numerous asci were formed from sclerotinia and the size were 0.4~1.6 cm in diameter. Asci with 8 spores were cylindrical and 74~236 ${\times}$ 4.2~24.8 m in size. Ascospores of one cell were hyaline, ellipsoid to ovoid in shape, and 8.3~12.4 ${\times}$ 3.6~7.2 m in size. The optimum temperature for mycelial growth was $25^{\circ}C$ , and sclerotinia forma-tion was between 15~$20^{\circ}C$. On the basis of mycological characteristics and pathogenecity test to host plants, the fungus was identified as Sclerotinia sclerotiorum. This is the first report of Sclerotinia sclerotiorum caused sclerotinia rot on Oenanthe javanica caused by in Korea.

Biological Control of Perilla Sclerotinia Rot Caused by Sclerotinia sclerotiorum Using Bacillus megaterium N4. (Bacillus megaterium N4에 의한 들깨 균핵병 (Sclerotinia sclerotiorum)의 생물학적 방제)

  • 문병주;김현주;송주희;이광열;백정우;정순재
    • Journal of Life Science
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    • v.14 no.5
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    • pp.761-769
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    • 2004
  • This study was investigated the occurrence of sclerotinia rot caused by Sclerotinia sclerotiorum at the major perilla cultivating area, Gangdong-dong, Gangseo-gu, Busan in 1998. The incidence of this disease ranged from 8.1 to 28.3% at Gangdong-dong area during the growing seasons. Symptoms of the disease initially appeared damping-off of infected stems and soft-rot on the leaves of perilla. Under the relatively high humidity, abundant white mycelia of the pathogen formed on the lesion developed into black sclerotia later and the infected leaves were finally fell down. Sixteen isolates, Sl-S16, isolated from diseased lesions showing typical symptoms, and pathogenicity was tested using mycerlial disks. Among them, S2 isolate showing the most strong pathogenicity was selected and identified as Sclerotinia sclerotiorum on the basis of morphological and cultural characteristics. For biological control, an antagonistic bacteria, N4 isolate which effectively inhibited not only mycelial growth of S2 isolate but also suppress sclerotinia rot on the pot assay, was selected and identified as Bacillus megaterium according to Bergey's manual and API system., Wettable powder type, N4 formulation using B. megaterium N4 isolate was developed and estimated its control effect on perilla crops in a plastic house. As a results, N4 formulation which applied before 3 days inoculation of pathogen was effectually controlled Sclerotinia rot as the control value of 98.0%, was more effective than chemical fungicide, benomyl showing the control value of 78.0%. This is the first report of wettable powder formulation as a biocontrol agent using B. megaterium N4 against Sclerotinia rot caused by S. sclerotiorum on perilla.