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The Complete Chloroplast Genome Sequence and Intra-Species Diversity of Rhus chinensis

  • Kim, Inseo;Park, Jee Young;Lee, Yun Sun;Joh, Ho Jun;Kang, Shin Jae;Murukarthick, Jayakodi;Lee, Hyun Oh;Hur, Young-Jin;Kim, Yong;Kim, Kyung Hoon;Lee, Sang-Choon;Yang, Tae-Jin
    • Plant Breeding and Biotechnology
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    • v.5 no.3
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    • pp.243-251
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    • 2017
  • Rhus chinensis is a shrub widely distributed in Asia. It has been used for traditional medicine and ecological restoration. Here, we report the complete chloroplast genome sequence of two R. chinensis genotypes collected from China and Korea. The assembled chloroplast genome of Chinese R. chinensis is 149,094 bp long, consisting of a large single copy (97,246 bp), a small single copy (18,644 bp) and a pair of inverted repeats (16,602 bp). Gene annotation revealed 77 protein coding genes, 30 tRNA genes, and 4 rRNA genes. A phylogenomic analysis of the chloroplast genomes with 11 known complete chloroplast genomes clarified the relationship of R. chinensis with the other plant species in the Sapindales order. A comparative chloroplast genome analysis identified 170 SNPs and 85 InDels at intra-species level of R. chinensis between Chinese and Korean collections. Based on the sequence diversity between Korea and Chinese R. chinensis plants, we developed three DNA markers useful for genetic diversity and authentication system. The chloroplast genome information obtained in this study will contribute to enriching genetic resources and conservation of endemic Rhus species.

Dietary Effect of Silk Protein on Colon Cancer of Animal (실크 단백질 식이공급이 동물대장암에 미치는 영향)

  • Yeo, Joo-Hong;Lee, Kwang-Gill;Woo, Soon-Ok;Kweon, Hae-Yong;Han, Sang-Mi;Park, Kyung-Ho;Kim, Sung-Su
    • Journal of Sericultural and Entomological Science
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    • v.49 no.2
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    • pp.67-70
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    • 2007
  • This study was done for the dietary effect of silk protein, molecular controlled silk sericin and silk fibroin, on colon cancer of animal. The ICR mice were given weekly injections of 1,2-dimethylhydrazine (DMZ) for the initial 10 mg/kg with four weeks, and fed a diets supplemented with 3% (v/v) molecular controlled sericin and fibroin for 6 weeks, respectively. Then, the body weight, efficiency of dietary, typical histologic appearance of animal colon tissue and COX-2 effect were studied, too. Molecular controlled sericin protein are shown more higher dietary effect on animal colon cancer than fibroin supplemental case. The results suggest a potential usefulness of sericin as a chemopreventive for colon carcinogenesis and the development functional food.

Analysis of the Main Habitat for Siberia Musk Deer (Moschus moschiferus) Restoration in Mt. Odae National Park, Korea (오대산국립공원 지역에 멸종위기종인 사향노루 복원을 위한 주요 서식지 분석에 관한 연구)

  • Park, Yong-Su;Kim, Jong-Taek;Lee, Woo-Shin
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.11 no.4
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    • pp.91-102
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    • 2008
  • This study was conducted to obtain the basic information about Siberia Musk Deer (Moschus moschiferus), and to establish a conservation area for the replacement of Siberia Musk Deer into Mt. Odea National Park, South Korea. We analyzed the main habitat for Siberia Musk Deer restoration in Mt. Odae National Park, Korea. We recorded Siberia Musk Deers' field signs (i.e., bedding sites, feeding areas, feces and tracks), and habitat variables such as nearest distance to the watercourse, trails, slope, aspect, forest type and land cover etc. from Dec. 2004 to Aug. 2007 in Mt. Jiri, Mt. Seorak, and Demilitarized Zone (DMZ). Rocky areas, ridges, mixed coniferous forest (Red pine and Mongolian oak), southern and southeastern slope, elevation of above 800m, and distance from watercourse shorter than 300m etc. were dominant habitat types of Siberia Musk Deer. Based on the significant habitat types, a proper conservation plan should be prepared for the restoration of habitats in order to reintroduce, and to increase the population of Siberia Musk Deer in Mt. Odea National Park, South Korea. Small population size, and limited ecological data are the major constraints for the establishment of conservation areas. Furthermore, other anthropogenic factors including human activities, poaching, and residential area around the park caused the difficulties to qualify as a conservation area. For the successful establishment of conservation area in the future, it is recommended to conduct a comprehensive ecological research, and to survey human disturbances including their impacts on the habitats of Siberia Musk Deer in the Mt. Odea National Park.

A Study on Security Hole Attack According to the Establishment of Policies to Limit Particular IP Area (특정 IP 영역 제한정책 설정에 따른 보안 취약점 공격에 관한 연구)

  • Seo, Woo-Seok;Jun, Moon-Seog
    • The Journal of the Korea institute of electronic communication sciences
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    • v.5 no.6
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    • pp.625-630
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    • 2010
  • With regard to the examples of establishing various sorts of information security, it can be seen that there are gradual, developmental procedures including Firewall and VPN (Virtual Private Network), IDS (Intrusion Detection System), or ESM(Enterprise Security Management). Each of the security solutions and equipments analyzes both defense and attack for information security with the criteria of classifying the problems of security policies by TCP/IP layers or resulted from attack patterns, attack types, or invasion through specialized security technology. The direction of this study is to examine latency time vulnerable to invasion which occurs when L2-stratum or lower grade equipments or policies are applied to the existing network through TCP/IP layer's L3-stratum or higher grade security policies or equipments and analyze security holes which may generate due to the IP preoccupation in the process of establishing policies to limit particular IP area regarding the policies for security equipments to figure out technological problems lying in it.

Seroprevalence of Toxoplasmosis in the Residents of Cheorwon-gun, Gangwon-do, Korea

  • Ahn, Hye-Jin;Cho, Pyo-Yun;Ahn, Seong-Kyu;Kim, Tong-Soo;Chong, Chom-Kyu;Hong, Sung-Jong;Cha, Seok-Ho;Nam, Ho-Woo
    • Parasites, Hosts and Diseases
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    • v.50 no.3
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    • pp.225-227
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    • 2012
  • The seroepidemiological status of toxoplasmosis was surveyed among the residents of Cheorwon-gun, Gangwon-do by means of ELISA using a crude extract antigen of Toxoplasma gondii. The sera of 1,661 adult residents (866 males and 795 females) were collected and checked for IgG antibody titers, which showed 17.0% positive rate (282 sera). The positive rate was significantly different between the sex; 20.6% for males and 13.1% for females (P<0.05). The positive rates were higher in fifties of males (28.7%) and forties of females (20.0%). This positive rate of toxoplasmosis in Cheorwon-gun residents is regarded as the highest among the surveys of different geographical regions of Korea. This high positive rate may due in part to peculiar geographical locality of the surveyed area near the naturally well preserved demilitarized zone (DMZ) or presumably consumption of the pork imported from high endemic nations. Therefore, it is necessary to study further the epidemiology of toxoplasmosis in Cheorwon-gun.

Characteristics of Vegetation Structure of Burned Area in Mt. Geombong, Samcheok-si, Kangwon-do (강원도 삼척 검봉산 일대 산불피해복원지 식셍구조 특성)

  • Jung Won Sung;Chae Rim Lee;Se Min Byun;Won-Seok Kang
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2022.09a
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    • pp.38-38
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    • 2022
  • 동해안 지역에서 발생되는 대형 산불의 원인은 건조주의보, 영동지역에서 불어오는 강한 바람, 소나무의 단순림, 임도 유무와 상태 등을 들고 있다. 조사 대상지인 삼척 검봉산 일대는 기존 소나무가 우점하는 곳으로 2001년 복원을 위해 소나무, 곰솔, 굴참나무 등을 조림하였고, 일부는 자연복원을 하였다. 복원 이후 21년 지난 현재 삼척 검봉산 일대 산불피해 복원지역의 식생은 크게 굴참나무-소나무군락, 소나무신갈나무군락, 곰솔-소나무군락으로 나누어지는 것으로 나타났다. 산불피해지 식생 회복은 굴참나무, 소나무, 곰솔 등 조림으로 현재 식생은 산불 발생 이전의 임상으로 회복되고 있다. 특히, 산불의 유형 중 지표화 피해지역은 하층 식생의 피해가 크다. 기존의 소나무는 결실된 종자를 비산하여 치수를 발생시켜 자연복원의 속도를 높이고 굴참나무를 활용한 인공복원은 맹아를 발달시켜 본인의 영역을 확장하는 전략을 지니고 있다. 단, 입지적 환경이 동일하다는 전제 조건에서 숲에서 재생 기작이 진행되는 자연복원보다는 인공복원이 회복시간과 종다양성이 높은 측면에서는 효과적인 것으로 결론을 지을 수 있다. 식생군락을 분류한 결과 굴참나무-소나무군락, 소나무-신갈나무군락, 곰솔소나무군락으로 3개 군락으로 나누어졌다. 인공복원지에 식재한 굴참나무, 소나무, 곰솔은 복원 이후 지속적으로 해당지역의 식생이 우점종으로 자생하고 있는 것으로 나타났으나, 소나무-신갈나무군락의 경우 참나무과 식물인 신갈나무와 굴참나무, 졸참나무가 교목층과 아교목층에 자연유입되고 있어 향후 신갈나무가 우점하는 활엽수림으로 천이 될 것으로 예상된다. 군락의 종다양도지수는 낙엽활엽수가 우점하는 굴참나무-소나무군락이 가장 높게 나타났으며, 침엽수림인 곰솔소나무군락이 가장 낮게 나타났다. 산불피해지 식생은 조림수종에 영향을 크게 받으며, 21년이 지난 현재 산불 이전 임상으로 회복되는 경향을 나타내었다. 향후, 효과적인 복원을 위한 DB구축 및 모니터링자료 마련을 위해 산불피해지에 대한 지속적인 식생조사를 통한 자료구축이 필요하다.

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Applying IUCN Regional/National Red List Criteria to the Red List (Vascular Plants) Published by the Ministry of Environment of Korea (환경부 적색목록(관속식물)에 대한 IUCN 지역적색목록 평가적용)

  • Chang, Chin-Sung;Kwon, Shin-Young;Son, Sungwon;Shin, Hyuntak;Kim, Hui
    • Journal of Korean Society of Forest Science
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    • v.109 no.4
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    • pp.371-381
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    • 2020
  • The Ministry of Environment (ME) is planning to adopt in 2020 the IUCN regional Red List for "Guidelines for listing and delisting rare & endangered species and management of endangered Species System". The ME designated 377 species of vascular plants on the regional Red List. In a previous study it had been suggested that 103 species from this list are candidates for the regional Red List. With respect to a possible Red List, we assessed 59 species (after excluding 34 additional NA species and ten endemic species). These assessments indicated that 16 species are at the "threatened" level. Of those, one species is Critically Endangered, ten are Endangered, and five are Vulnerable. A further four species are classified as Near Threatened, 30 as Of Least Concern, and nine as Data Deficient. We found that most of the assessments proposed by the Ministry of Environment were not supported by scientific data, including quantitative geographic data (over 70%) in Criteria B. In order to determine the endangered species belonging to the orchid family, it is necessary to obtain records of illegal activities or data on overcollection. The current problem with the Ministry of Environment Red List has been the lack of management of scientific data on species showing a trend in decreasing population in the mid- to long-term; thus, there is a lack of critical resources for policy-makers. The ME legally designated categories and assessment, and the lack of expertise in failing to comply with the legal law by itself. The key to presenting an accurate overview of the state of Korean flora is to fill the information gaps with respect to significant geographical and taxonomical biases in the quality and quantity of data. By regularly updating the qualified data, we will be able to track the changes in the conservation status of the flora and inform the necessary conservation policies.

Ecological studies on Togyo Reservoir in Chulwon, Korea. V. Seasonal Changes of Size-Fractionated Standing Crops and Chlorophyll a of Phytoplankton in Kyungan Stream of Paldang River-Reservoir Systems and Togyo Reservoir, Korea (철원북방 DMZ내의 중영양호 토교저수지의 생태학적 연구 V. 경안천(팔당호)과 토교저수지에서 식물플랑크톤의 크기별 현존량과 Chlorophyll $\alpha$의 계절 변동)

  • Han, Myung-Soo;Lee, Hu-Rang;Hong, Sung-Su;Kim, Young-Ok;Lee, Kyung;Choi, Yong-Keel;Kim, Sewha;Yoo, Kwang-Il
    • Korean Journal of Environmental Biology
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    • v.20 no.1
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    • pp.91-99
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    • 2002
  • With physico-chemical environmental factors such as temperature, DO, pH, conductivity and nutrients, size fractionated of phytoplankton standing crops and chlorophyll a concentrations $(>8\mu{m},\;3-8\mu{m},\;<3\mu{m})$ and their relationships were investigated at each station of Kyungan Stream and Togyo Reservoir from April to November in 1997. The two sampling sites showed different nutrient status: Kyungan Stream was eutrophic, while Togyo Reservoir was mesotrophic. Large sizes of phytoplankton and chl. a were higher in Kyungan Stream, opposite to those of Togyo Reservoir; Standing crops of phytoplankton $(>8\mu{m)$ and chl. a $(3-8\mu{m)}$ were high in Kyung-an Stream, while phytoplankton $(3-8\mu{m)}$and chi. a $(<3\mu{m)$ were abundant in Togyo Reservoir. These results imply that phytoplankton community in the highly eutrophicated water mainly comprised the large filamentous and/or colonial algae, such as Microcystis spp. and Aphanizomenon flos-aquae, which easily enriched by nutrients loading.

Population Characteristics of Echinosophora koreensis (Nakai) Nakai, a Endemic Plants in Korea (한반도 특산식물 개느삼의 개체군 특성)

  • Kim, Sodam;Moon, Ae-Ra;An, Jong-Bin;Jung, Ji-Young;Park, Wan-Geun;Son, Sungwon
    • Korean Journal of Environment and Ecology
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    • v.34 no.1
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    • pp.18-26
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    • 2020
  • Echinosophora koreensis (Nakai) Nakai an endemic plant with limited distribution in some parts of the Korean Peninsula, is designated as "Endangered" species on the IUCN Red List. The species is under the threat of deterioration in nature due to various environmental changes causing loss of natural habitats. We investigated the distribution pattern and population structure of E. koreensis to serve as a basic reference for identifying the dynamics and persistence of natural populations of this species in the future. To determine the characteristics of the E. koreensis population, we laid two to three large plots sized 20m×30m on the ridgeline as the reference in Yanggu, Chuncheon, and Hongcheon and laid four to seven small quadrats sized 1m×1m on the transect. A total of 530 plots were laid, 10 each at 2m interval, to measure the number of the stems, the number of fruiting, height, and other factors. The collected distribution information was compared with the existing IUCN assessed categories by applying IUCN Red List ver 3.1 Criteria B. The average population density of the three surveyed areas was 3.47 stem/㎡; the density of each area was 3.95 stems/㎡ in Yanggu, 3.37 stems/㎡ in Chuncheon, and 2.87 stems/㎡ in Hongcheon. The number of fruiting per stem was 0.0038, indicating only 7 fruits out of 1,837 stems and that vegetative reproduction is likely to be more dominant than sexual reproduction. The distribution tendency of population density in the small plots in three surveyed areas showed that the density of E. koreensis tended to decrease toward the center of the forest with low crown openness and around the mountain ridge with high crown openness. It indicated that the quantity of light could be a very important factor for the growth of individuals of this species. The analysis of the heights of individuals present in the surveyed plots showed a range of 2.3 ~ 68.5cm and an average of 20.1cm. An analysis on the stage-structure of the E. koreensis population based on the sieve height found that the appearance frequency decreased with increasing height above 15 ~ 20cm and that the percentage of individuals lower than 10cm, which were presumed to be seedlings, was severely low, indicating a necessity of study on the population sustainability based on the monitored data. The occupied area calculated with the collected species distribution information was 200㎢, indicating the EN category according to the IUCN Red List Reference B.

A Study on 3D Virtual Restoration and Convergence Utilization of Gas Masks for Digital Reproduction of War Cultural Heritage (전쟁 문화유산 디지털 재현을 위한 방독면 3D 가상 복원 및 융합 활용 연구)

  • Hyoung-Ki Ahn;Seung-Jun Oh;Ho-Yeon Lee;Young-Guy Lee
    • Journal of Internet of Things and Convergence
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    • v.9 no.1
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    • pp.89-95
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    • 2023
  • In January 2007, the Remains Excavation and Investigation Team of the Ministry of National Defense was established, and full-scale excavation of remains was promoted. Currently, the scope of the excavation is being expanded to Baekma Hill within the DMZ, where fierce battles were fought during the Korean War. Now, many remains and remains are being excavated in Baekma hill. Most are in damaged condition. Therefore, in this study, the original form of the excavated remains was restored using 3D scanning and 3D modeling. This digital restoration method can be an alternative to compensate for the disadvantages of the manual method. Currently, various digital restorations using 3D technology are active in the field of cultural heritage. Digitally restored materials can be used as basic data for digital heritage. Based on this, various contents related to excavation of remains and patriots and veterans can be developed. Furthermore, if digital human restoration is made based on the excavated remains, it will be possible to reproduce the appearance of the dead.