• Title/Summary/Keyword: Ribonuclease

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Induction of Ribosomal Ribonuclease during Catabolic Repression in Saccharomyces uvarum (Saccharomyces uvarum의 Catabolic Repression 시기에 유도되는 Ribosomal Ribonuclease에 대한 연구)

  • Yoon, Seong-Nyo;Lee, Ki-Sung;Choi, Yong-Keel
    • The Korean Journal of Mycology
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    • v.14 no.3
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    • pp.201-207
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    • 1986
  • In order to study subcellular locality and characteristics of ribonuclease in Saccharomyces uvarum, subcelllar fractions $45,000{\times}g$ pellet fraction, post ribosomal fraction and ribosome fraction were extracted during late log, stationary phase and sugar starvation conditions. Ribonuclease activity was significantly increased in ribosomal fraction under stationary and sugar starvation conditions. Ribosomal ribonuclease was extracted by EDTA plus streptomycin sulfate and ammonium sulfate precipitation. The amount of ribosome in stationary and sugar starvation condition was decreased three to six fold as compared to that in the early log phase. The end products of ribosomal ribonuclease were detected by thin layer chromatography. It is postulated that the increase of ribosomal ribonuclease activity under sugar starvation results from 5'-rRNase, while the increase of rRNase activity under stationary phase results from 3'-rRNase.

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Improved Fluorometric Assay Method for Ribonuclease Activity

  • Lee, Jong-Soo;Choi, Jong-Soo
    • BMB Reports
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    • v.30 no.4
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    • pp.258-261
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    • 1997
  • A simple quantitative assay method for ribonuclease activity has been developed. This method is based on the decrease of fluorescence intensity emitted by the ethidium bromide bound to RNA due to the degradation of RNA by ribonuclease. The substrate RNA was reacted with ribonuclease A and the fluorescence intensity was measured after the addition of ethidium bromide. The intensity difference was calculated using a blank reaction mixture containing no RNase. Whole cellular RNA substrate produced a significant error and was not suitable for this assay method possibly because of local microheterogeniety caused by high molecular weight rRNA. but satisfying results were obtained with tRNA substrate. The intensity difference increased linearly by raising enzyme concentration up to $2{\times}10^{-4}$ Kunitz Units of ribonuclease A. More refined and reliable results were obtained by use of initial reaction velocities which were calculated from the plots of intensity difference vs time. A linear relationship between initial velocities and enzyme concentrations was observed up to 0.01 Kunitz Units of enzyme.

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ATP-Inhibited Ribonuclease of Bacillus subtilis (Bacillus subtilis ATP 조해(阻害) Ribonuclease에 관한 연구)

  • Lee, Taik-Soo
    • Applied Biological Chemistry
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    • v.18 no.3
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    • pp.167-176
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    • 1975
  • As a study on the ATP-inhibited ribonuclease of Bacillus subtilis the screening work for obtaining the ATP-inhibited ribonuclease negative mutant were carried out. And mutant strain was selected by the treatment of N-methyl-N'-nitro-N-nitrosoguanidine (NTG). For the selected strain the enzyme purification and some physiological properties were examined and the results obtained were as follows. 1. Among tested 1817 strains with the treatment of NTG, 101 strain was selected as a mutant strain. 2. ATP-inhibited ribonuclease was tentatively purified by several independent column chromatography. The results with Sephadex G-75 column were 30 times purification, 99% recovery, and 20 times purification, 98% recovery, respectively. 3. ATP-inhibited ribonuclease was purified by 60 times through acid treatment, ammonium fractionation, and two successive chromatography. 4. The purified ribonuclease were shown to be effectively concentrated in robonnclease content and to have reduced numbers of protein band on Disc electrophoresis. 5. This enzyme degraded single-stranded RNA to 2',3'-cyclic AMP, 2',3'-cyclic CMP, 2',3,-cyclic GMP, 2',3'-cyclic UMP and some unknown intermediates. The enzyme could not split double-stranded RNA.

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An Antiproliferative Ribonuclease from Fruiting Bodies of the Wild Mushroom Russula delica

  • Zhao, Shuang;Zhao, Yong Chang;Li, Shu Hong;Zhang, Guo Qing;Wang, He Xiang;Ng, Tzi Bun
    • Journal of Microbiology and Biotechnology
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    • v.20 no.4
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    • pp.693-699
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    • 2010
  • An antiproliferative ribonuclease with a new N-terminal sequence was purified from fruiting bodies of the edible wild mushroom Russula delica in this study. This novel ribonuclease was unadsorbed on DEAE-cellulose, but absorbed on SP-Sepharose and Q-Sepharose. It had a molecular mass of 14 kDa, as judged by fast protein liquid chromatography on Superdex 75 and SDS-polyacrylamide gel electrophoresis. Its optimal pH and optimal temperature were pH 5 and $60^{\circ}C$, respectively. The ranking of its activity toward various polyhomoribonucleotides was poly C> poly G>poly A>poly U. It could inhibit proliferation of HepG2 and MCF-7 cancer cells with an $IC_50$ value of $8.6\;{\mu}M$ and $7.2\;{\mu}M$, respectively. It was devoid of antifungal and HIV-1 reverse transcriptase inhibitory activity.

Inhibitory Effect of Spermine of the Susceptibility of RNA for RNase A (RNase A에 對한 RNA의 加水分解反應性에 미치는 Spermine의 抑制效果)

  • Chan Yong Lee;Heung Kyun Kim;Thong-Sung Ko
    • Journal of the Korean Chemical Society
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    • v.29 no.6
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    • pp.646-650
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    • 1985
  • RNA degradation by riboinuclease A (EC 3.1.27.5) was inhibited by spermine. As the concentration of spermine was increased, the ribonuclease activity was decreased gradually until it reached a plateau. Under the same conditions, the viscosity of the RNA increased, as the spermine concentration was increased until it reached a plateau in the same manner as the profile of the spermine-dependent ribonuclease activity. The inhibitory effect of spermine on the susceptibility of RNA to the ribonuclease could be relieved by denatured calf thymus DNA, but not by the native DNA. The data here indicate the possibility that the suppress of the RNA susceptibility for the ribonuclease by spermine is brought about by the spermine-induced intermolecular aggregation of the RNA molecules.

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A Phosphate Starvation-Inducible Ribonuclease of Bacillus licheniformis

  • Nguyen, Thanh Trung;Nguyen, Minh Hung;Nguyen, Huy Thuan;Nguyen, Hoang Anh;Le, Thi Hoi;Schweder, Thomas;Jurgen, Britta
    • Journal of Microbiology and Biotechnology
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    • v.26 no.8
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    • pp.1464-1472
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    • 2016
  • The BLi03719 protein of Bacillus licheniformis DSM13 belongs to the most abundant extracellular proteins under phosphate starvation conditions. In this study, the function of this phosphate starvation inducible protein was determined. An amino-acid sequence analysis of the BLi03719-encoding gene showed a high similarity with genes encoding the barnase of Bacillus amyloliquefaciens FZB42 and binase-like RNase of Bacillus pumilus SARF-032. The comparison of the control strain and a BLi03719-deficient strain revealed a strongly reduced extracellular ribonuclease activity of the mutant. Furthermore, this knockout mutant exhibited delayed growth with yeast RNA as an alternative phosphate and carbon source. These results suggest that BLi03719 is an extracellular ribonuclease expressed in B. licheniformis under phosphate starvation conditions. Finally, a BLi03719 mutant showed an advantageous effect on the overexpression of the heterologous amyE gene under phosphate-limited growth conditions.

Interaction of Salivary Proteins with Human Enamel and Dentin Powder (법랑질과 상아질의 타액단백 흡착에 관한 연구)

  • Kim, Dong-Soon
    • The Journal of the Korean dental association
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    • v.11 no.3
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    • pp.205-209
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    • 1973
  • 법랑질과 상아질의 타액단백의 흡착관계를 구명키 위하여 타액을 법랑질과 상아질 분말의 column에 흡착시킨후 증류수, 3M Nacl, 0.1M phosphate buffer, pH 7.1, 0.2M EDTA 함유한 phosphate buffer와 증류수를 차례로 용출시켜 용출액의 amylase, ribonuclease 및 단백양을 관찰한 결과는 다음과 같다. 1. 타액 amylase와 ribonuclease는 법랑질과 상아질 분말에 모두 흡착하였다. 2. 0.2M EDTA가 함유한 buffer에서는 단백양을 법랑질과 상아질분말에서 모두 33.5%정도 용출되었으나 효소활성은 없었다.

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Protein Separation with CTAB/Hexanol/Isooctane Reverse Micellar System (CTAB/Hexanol/Isooctane 역미셀계를 이용한 단백질 분리)

  • 김영숙;신해헌;권윤중;변유량;홍석인
    • Microbiology and Biotechnology Letters
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    • v.18 no.5
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    • pp.517-524
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    • 1990
  • The solubilization and desolubilization of proteins in CTAB/hexanol/isooctane reverse micellar system were investigated for the selective separation of proteins. Several proteins were used, including bovine serum albumin (BSA), pepsin, trysin and ribonuclease-a. Most proteins could be solubilized into reverse micelles in the pH range above the isoelectric point of each protein, where the net charge of protein was opposite to that of surfactant. However BSA was solubilized above pH 10, which is serveral pH units above the pI 4.9. The kinds of anions in aqueous phase influenced on protein solubilization while no significant trend was observed with different cations, Protein solubilization decreased with increase of the ion size in the order of F -, C1-, Br- and I -. The size of CTAB micelles did not change significantly with increasing ionic strength, but the solubilization decreased. Protein desolubilization showedropposite behaviors to the solubilization. Several model mixtures such as pepsin/ trypsin, pepsin/ribonuclease-a and BSAlribonucleaee-a were successfully separated from each other without changing enzymatic activities.

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Functional Implications of the Conserved Action of Regulators of Ribonuclease Activity

  • Yeom, Ji-Hyun;Shin, Eun-Kyoung;Go, Ha-Young;Sim, Se-Hoon;Seong, Maeng-Je;Lee, Kang-Seok
    • Journal of Microbiology and Biotechnology
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    • v.18 no.8
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    • pp.1353-1356
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    • 2008
  • RNase E (Rne) plays a major role in the decay and processing of numerous RNAs in E. coli, and protein inhibitors of RNase E, RraA and RraB, have recently been discovered. Here, we report that coexpression of RraA or RraB reduces the ribonucleolytic activity in rne-deleted E. coli cells overproducing RNase ES, a Streptomyces coelicolor functional ortholog of RNase E, and consequently rescues these cells from growth arrest. These findings suggest that the regulators of ribonuclease activity have a conserved intrinsic property that effectively acts on an RNase E-like enzyme found in a distantly related bacterial species.

Cloning and Sequencing of the rph Gene Encoding RNase PH from Legionella pneumophila

  • Kim, Se-Jin;Lim, Jong-Seok;Cianciotto, Nicholas P.;Choe, Yong-Kyung
    • Journal of Microbiology
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    • v.37 no.4
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    • pp.218-223
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    • 1999
  • Legionella pneumophila, the cause of Legionnaires disease, is able to survive intracellularly in eukaryotic cells such as monocytes, macrophages, and protozoan organisms. During protein biosynthesis, the rph gene encodes ribonuclease (RNase) PH which functions as a phosphorolytic nuclease that removes nucleotides following the CCA terminus of tRNA and as a nucleotidyl-transferase which adds nucleotides to the ends of RNA molecules by usingnucelside diohosphates as substrates. In this sutdy, the rph gene was screened in pUC19 library employing a DNA probe which was constructed from PCR based on a consensus pattern of multiple alignment of RNas PH. The encoded protein consists of 235 amino acid residues with a calculated molecular weight of 26,112 Daltons. The RNase PH signature domains are completely conserved.

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