• 제목/요약/키워드: Reprogramming

검색결과 210건 처리시간 0.03초

무선 센서 네트워크에서 노드 재프로그래밍을 위한 타부 서치 알고리즘 (A Tabu Search Algorithm for Node Reprogramming in Wireless Sensor Networks)

  • 장길웅
    • 한국정보통신학회논문지
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    • 제23권5호
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    • pp.596-603
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    • 2019
  • 무선 센서 네트워크에서 배치된 노드의 기능을 변경하거나 갱신하기 위해 노드의 소프트웨어 코드를 업데이트하는 재프로그래밍 동작은 필수적이다. 본 논문은 무선 센서 네트워크에서 노드의 재프로그래밍을 목적으로 노드의 전송에너지를 최소화하는 최적화 알고리즘을 제안한다. 또한 네트워크의 수명을 오래 유지하기 위해 전체 노드의 에너지 소모를 균형있게 유지하도록 알고리즘을 설계한다. 본 논문에서는 많은 수의 노드가 배치된 무선 센서 네트워크에서 전송에너지의 최소화와 에너지 소모의 균형화를 위해 새로운 이웃해 생성방식을 가진 타부서치 알고리즘을 제안한다. 제안된 알고리즘은 적정한 수행 시간 내에 최적의 결과를 도출하도록 설계되었다. 제안된 타부서치 알고리즘의 성능은 노드의 전송에너지와 남은 에너지, 알고리즘 수행시간 측면에서 평가되었으며, 성능 평가 결과에서 이전의 방식에 비해 우수한 성능을 보였다.

Cellular internalization effect of Ara27 in various cell lines

  • Minseo Kim;Sangkyu Park;Jeongmin Seo;Sangho Roh
    • 한국동물생명공학회지
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    • 제37권4호
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    • pp.239-245
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    • 2022
  • Protein and peptide candidates are screened to apply therapeutic application as a drug. Ensuring that these candidates are delivered and maximized effectiveness is still challenging and a variety of studies are ongoing. As drug delivery system vehicles, cell-penetrating peptide (CPP) can deliver various kinds of cargo into the cell cytosol. In a previous study, we developed Ara27 CPP, which are a zinc knuckle family protein of Arabidopsis, and confirmed internalization in human dermal fibroblasts and human dental pulp stem cells at low concentration with short time treatment condition without any toxicity. Ara27, an amphipathic CPP, could be modified and utilized in the biomedical field excluding the risk of toxicity. Therefore, we would like to confirm the non-toxic induced penetrating ability of Ara27 in various cell lines. The purpose of this study was to screen the cell internalization ability of Ara27 in various cell lines and to confirm Ara27 as a promising core CPP structure. First, Ara27 was screened to confirm non-toxicity concentration. Then, fluorescence-labeled Ara27 was treated on human normal cell lines, cancer cell lines and animal cell lines to identify the cellular internalization of Ara27. Ara27 was well intracellular localized in all cell lines and the intensity of fluorescence was remarkably increased in time pass manner. These results indicate that Ara27 has the potential as a core structure for applications in various drug delivery systems.

Homogeneity of XEN Cells Is Critical for Generation of Chemically Induced Pluripotent Stem Cells

  • Dahee Jeong;Yukyeong Lee;Seung-Won Lee;Seokbeom Ham;Minseong Lee;Na Young Choi;Guangming Wu;Hans R. Scholer;Kinarm Ko
    • Molecules and Cells
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    • 제46권4호
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    • pp.209-218
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    • 2023
  • In induced pluripotent stem cells (iPSCs), pluripotency is induced artificially by introducing the transcription factors Oct4, Sox2, Klf4, and c-Myc. When a transgene is introduced using a viral vector, the transgene may be integrated into the host genome and cause a mutation and cancer. No integration occurs when an episomal vector is used, but this method has a limitation in that remnants of the virus or vector remain in the cell, which limits the use of such iPSCs in therapeutic applications. Chemical reprogramming, which relies on treatment with small-molecule compounds to induce pluripotency, can overcome this problem. In this method, reprogramming is induced according to the gene expression pattern of extra-embryonic endoderm (XEN) cells, which are used as an intermediate stage in pluripotency induction. Therefore, iPSCs can be induced only from established XEN cells. We induced XEN cells using small molecules that modulate a signaling pathway and affect epigenetic modifications, and devised a culture method which can produce homogeneous XEN cells. At least 4 passages were required to establish morphologically homogeneous chemically induced XEN (CiXEN) cells, whose properties were similar to those of XEN cells, as revealed through cellular and molecular characterization. Chemically iPSCs derived from CiXEN cells showed characteristics similar to those of mouse embryonic stem cells. Our results show that the homogeneity of CiXEN cells is critical for the efficient induction of pluripotency by chemicals.

Effect of the hedgehog signaling pathway on hair formation-related cells

  • Park, Jaehyun;Park, Sangkyu;Seo, Jeongmin;Roh, Sangho
    • International Journal of Oral Biology
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    • 제44권4호
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    • pp.144-151
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    • 2019
  • Alopecia has emerged as one of the biggest interests in modern society. Many studies have focused on the treatment of alopecia, such as transplantation of hair follicles or inhibition of the androgen pathway. Hair growth is achieved through proper proliferation of the components such as keratinocytes and dermal papilla cells (DPCs), movement, and interaction between the two cells. The present study examined the effect of the hedgehog (Hh) signaling pathway, which is an important and fundamental signal in the cell, on the morphology and the viability of human keratinocytes and DPCs. Upregulation of Hh signaling caused a morphological change and an increase in epithelium-mesenchymal transition-related gene expression but reduced the viability of keratinocytes, while the alteration of Hh signaling did not cause any change in DPCs. The results show the possibility that the regulation of Hh signaling can be applied for the treatment of alopecia.

Oncogene-Driven Metabolic Alterations in Cancer

  • Min, Hye-Young;Lee, Ho-Young
    • Biomolecules & Therapeutics
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    • 제26권1호
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    • pp.45-56
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    • 2018
  • Cancer is the leading cause of human deaths worldwide. Understanding the biology underlying the evolution of cancer is important for reducing the economic and social burden of cancer. In addition to genetic aberrations, recent studies demonstrate metabolic rewiring, such as aerobic glycolysis, glutamine dependency, accumulation of intermediates of glycolysis, and upregulation of lipid and amino acid synthesis, in several types of cancer to support their high demands on nutrients for building blocks and energy production. Moreover, oncogenic mutations are known to be associated with metabolic reprogramming in cancer, and these overall changes collectively influence tumor-microenvironment interactions and cancer progression. Accordingly, several agents targeting metabolic alterations in cancer have been extensively evaluated in preclinical and clinical settings. Additionally, metabolic reprogramming is considered a novel target to control cancers harboring un-targetable oncogenic alterations such as KRAS. Focusing on lung cancer, here, we highlight recent findings regarding metabolic rewiring in cancer, its association with oncogenic alterations, and therapeutic strategies to control deregulated metabolism in cancer.

Oct4 resetting by Aurkb–PP1 cell cycle axis determines the identity of mouse embryonic stem cells

  • Shin, Jihoon;Youn, Hong-Duk
    • BMB Reports
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    • 제49권10호
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    • pp.527-528
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    • 2016
  • In embryonic stem cells (ESCs), cell cycle regulation is deeply connected to pluripotency. Especially, core transcription factors (CTFs) which are essential to maintaining the pluripotency transcription programs should be reset during M/G1 transition. However, it remains unknown about how CTFs are governed during cell cycle progression. Here, we describe that the regulation of Oct4 by Aurora kinase b (Aurkb)/protein phosphatase 1 (PP1) axis during the cell cycle is important for resetting Oct4 to pluripotency and cell cycle related target genes in determining the identity of ESCs. Aurkb starts to phosphorylate Oct4(S229) at the onset of G2/M phase, inducing the dissociation of Oct4 from chromatin, whereas PP1 binds Oct4 and dephosphorylates Oct4(S229) during M/G1 transition, which resets Oct4-driven transcription for pluripotency and the cell cycle. Furthermore, Aurkb phosphormimetic and PP1 binding-deficient mutations in Oct4 disrupt the pluripotent cell cycle, lead to the loss of pluripotency in ESCs, and decrease the efficiency of somatic cell reprogramming. Based on our findings, we suggest that the cell cycle is directly linked to pluripotency programs in ESCs.

Stemness and Proliferation of Murine Skin-Derived Precursor Cells under Hypoxic Environment

  • Kim, Hyewon;Park, Sangkyu;Roh, Sangho
    • International Journal of Oral Biology
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    • 제41권2호
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    • pp.69-74
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    • 2016
  • Skin-derived precursors (SKPs) have potential to differentiate to various cell types including osteoblasts, adipocytes and neurons. SKPs are a candidate for cell-based therapy since they are easily accessible and have multipotency. Most mammalian cells are exposed to a low oxygen environment with 1 to 5% $O_2$ concentration in vivo, while 21% $O_2$ concentration is common in in vitro culture. The difference between in vitro and in vivo $O_2$ concentration may affect to the behavior of cultured cells. In this report, we investigated the effect of hypoxic condition on stemness and proliferation of SKPs. The results indicated that SKPs exposed to hypoxic condition for 5 days showed no change in proliferation. In terms of mRNA expression, hypoxia maintained expression of stemness markers; whereas, oncogenes, such as Klf4 and c-Myc, were downregulated, and the expression of Nestin, related to cancer migration, was also downregulated. Thus, SKPs cultured in hypoxia may reduce the risk of cancer in SKP cell-based therapy.

The Role of Protein Kinases in Reprogramming and Development of SCNT Embryos

  • Choi, Inchul;Campbell, Keith H.S.
    • 한국수정란이식학회지
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    • 제30권1호
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    • pp.33-43
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    • 2015
  • Successful somatic cell nuclear transfer (SCNT) has been reported across a range of species using a range of recipient cells including enucleated metaphase II (MII) arrested oocytes, enucleated activated MII oocytes, and mitotic zygotes. However, the frequency of development to term varies significantly, not only between different cytoplast recipients but also within what is thought to be a homogenous population of cytoplasts. One of the major differences between cytoplasts is the activities of the cell cycle regulated protein kinases, maturation promoting factor (MPF) and mitogen activated protein kinase (MAPK). Dependent upon their activity, exposure of the donor nucleus to these kinases can have both positive and negative effects on subsequent development. Co-ordination of cell cycle stage of the donor nucleus with the activities of MPF and MAPK in the cytoplast is essential to avoid DNA damage and maintain correct ploidy. However, recent information suggests that these kinases may also effect reprogramming of the somatic nucleus and preimplantation embryo development by other mechanisms. This article will summarise the differences between cytoplast recipients, their effects on development and discuss the potential role/s of MPF and or MAPK in nuclear reprogramming.

Reversine과 세포의 역분화 및 교차분화 (Reversine, Cell Dedifferentiation and Transdifferentiation)

  • 문양수
    • 생명과학회지
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    • 제30권4호
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    • pp.394-401
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    • 2020
  • 배아줄기세포는 만능세포이기 때문에 동물에게 주입되면 종양으로 발달할 수도 있다. 따라서 연구자들은 종양 형성으로부터 비교적 자유로운 성체세포로부터 세포 특이적 줄기세포(성체줄기세포)를 확보하는데 관심을 두고 있다. 성체줄기세포는 제한적으로 세포분열을 할 수 있고 지정된 특정 세포로만 발달할 수 있다. 포유동물에서 각 조직의 세포들은 자연적 생리조건하에서는 역분화 혹은 교차분화에 의해 성체줄기세포로 전환되지 않는다. 따라서 일본 연구자들에 의하여 2006년 성체세포의 리프로그램에 의한 유도만능줄기세포(iPSCs) 기술이 소개되어 성체줄기세포 연구의 새로운 장을 열었다. 비록 연구현장에서 iPSCs 기술이 폭 넓게 이용되지만, 리프로그램의 안정성뿐만 아니라 유전체에 외래유전자의 도입 등의 문제점도 있다. Reversine은 iPSCs 보다 2년 앞서 발견된 작은 화학적 합성 분자인 퓨린 유사체이다. Reversine은 분화된 세포를 리프로그램에 의한 역분화를 유도하여 다능성 줄기세포로 전환시킬 수 있으며, 적절한 분화조건하에서 다른 세포로 교차분화를 유도할 수도 있다. 따라서 reversine은 iPSCs가 가지고 있는 문제점을 극복하고 화학적인 방법을 이용하여 성체세포를 다능성 줄기세포로 전환시킬 수 있는 물질로 활용될 수 있다. Reversine이 백색지방세포를 갈색지방형세포(beige cell)로 전변시켜 열발산에 의한 에너지소비를 촉진함을 제시하여 항비만인자로서 그 가능성을 열어 놓았다. Reversine은 세포 역분화의 기능적 역할 이외에 항암 인자로서 또 다른 기능들이 보고되고 있어 앞으로 여러 분야에서 그 이용성이 기대되는 물질이다.