• 제목/요약/키워드: Related Studies

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Possibility of the Use of Public Microarray Database for Identifying Significant Genes Associated with Oral Squamous Cell Carcinoma

  • Kim, Ki-Yeol;Cha, In-Ho
    • Genomics & Informatics
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    • 제10권1호
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    • pp.23-32
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    • 2012
  • There are lots of studies attempting to identify the expression changes in oral squamous cell carcinoma. Most studies include insufficient samples to apply statistical methods for detecting significant gene sets. This study combined two small microarray datasets from a public database and identified significant genes associated with the progress of oral squamous cell carcinoma. There were different expression scales between the two datasets, even though these datasets were generated under the same platforms - Affymetrix U133A gene chips. We discretized gene expressions of the two datasets by adjusting the differences between the datasets for detecting the more reliable information. From the combination of the two datasets, we detected 51 significant genes that were upregulated in oral squamous cell carcinoma. Most of them were published in previous studies as cancer-related genes. From these selected genes, significant genetic pathways associated with expression changes were identified. By combining several datasets from the public database, sufficient samples can be obtained for detecting reliable information. Most of the selected genes were known as cancer-related genes, including oral squamous cell carcinoma. Several unknown genes can be biologically evaluated in further studies.

환경성 발암 기전에서 유전자-환경 상호작용의 역할 (The Role of Gene-environment Interaction in Environmental Carcinogenesis)

  • 한소희;이경무
    • 한국환경보건학회지
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    • 제36권1호
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    • pp.1-13
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    • 2010
  • Evidences supporting gene-environment interaction are accumulating in terms of environmental exposure including lifestyle factors and related genetic variants. One form of defense mechanism against cancer development involves a series of genes whose role is to metabolize (activation/detoxification) and excrete potentially toxic compounds and to repair subtle mistakes in DNA. The purpose of this article is to provide a brief review of the notion of gene-environment interaction, environmental/occupational carcinogens and related cancers, and previous studies of gene-environment interaction on cancers caused by exposure to carcinogenesis. With a number of studies on the interaction between lifestyle factors (e.g., smoking and diet) and genetic polymorphisms in genes involved in xenobiotic metabolism and DNA repair excluded, only several studies have been conducted on the interactive effects between polymorphisms of CYPs, GSTs, ERCCs, XRCCs and environmental/occupational carcinogens such as vinyl chloride, benzo[a]pyrene, and chloroform on carcinogenesis or genotoxicity. Future studies may need to be conducted with sufficient number of subjects and based on occupational cohorts to provide useful information in terms of advanced risk assessment and regulation of exposure level.

Structure Determination of Syndecan-4 Transmembrane Domain using PISA Wheel Pattern and Molecular Dynamics simulation

  • Choi, Sung-Sub;Jeong, Ji-Ho;Kim, Ji-Sun;Kim, Yongae
    • 한국자기공명학회논문지
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    • 제18권2호
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    • pp.58-62
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    • 2014
  • Human transmembrane proteins (hTMPs) are closely related to transport, channel formation, signaling, cell to cell interaction, so they are the crucial target of modern medicinal drugs. In order to study the structure and function of these hTMPs, it is important to prepare reasonable amounts of proteins. However, their preparation is seriously difficult and time-consuming due to insufficient yields and low solubility of hTMPs. We tried to produce large amounts of Syndecan-4 transmembrane domain (Syd4-TM) that is related to the healing wounds and tumor for a long time. In this study, we performed the structure determination of Syd4-TM combining the Polarity Index at Slanted Angle (PISA) wheel pattern analysis based on $^{15}N-^1H$ 2D SAMPI-4 solid-state NMR of expressed Syd4-TM and Molecular Dynamics (MD) simulation using Discovery Studio 3.1.

No Effect of Energy Intake Overall on Risk of Endometrial Cancers: a Meta-analysis

  • Chu, Ke-Tan;Song, Yang;Zhou, Jian-Hong
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권23호
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    • pp.10293-10298
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    • 2015
  • Background: Previous epidemiologic studies on the association between energy intake and endometrial cancer risk have only generated contradictory results. The role of energy intake in endometrial carcinogenesis thus remains unclear. To quantitatively assess the potential association between energy intake and endometrial cancer, a meta-analysis of case-control and cohort studies was here conducted. Materials and Methods: Eligible studies were retrieved via both computerized searches and review of references. Fixed-or random-effect models were used to summarize the estimates of OR with 95%CIs. Stratified analyses on study design, region and macronutrients' calorie were performed. Results: Sixteen studies met the inclusion criteria of the meta-analysis. No association between total energy intake and endometrial cancer was observed in either overall group (OR=1.11, 95%CI 0.92-1.30) or subgroups stratified by study design and region. In the specific macronutrients' calorie analysis, higher fat energy intake was found to be associated with increased endometrial risk (OR=1.72, 95%CI 1.12-2.32) while energy from carbohydrate and protein was not related to endometrial cancer risk. Conclusions: Our analysis did not support that total energy intake is related to endometrial cancer risk, in contrast to fat energy.

Structural Change in Transmembrane Region of Syndecan-4 by Mutation

  • Choi, Sung-Sub;Kim, Ji-Sun;Jeong, Ji-Ho;Kim, Yongae
    • 한국자기공명학회논문지
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    • 제20권4호
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    • pp.129-137
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    • 2016
  • Transmembrane(TM) proteins are closely related to transport, channel formation, signaling, cell to cell interaction, so they are the crucial target of modern medicinal drugs. In order to study the structure and function of these TM proteins, it is important to prepare reasonable amounts of proteins. However, their preparation is seriously difficult and time-consuming due to insufficient yields and low solubility of TM proteins. We tried to produce large amounts of Syndecan-4 containing TM domain(SDC4-TM) that is related to the wound healing and tumor. Also, mutated SDC4-TM was studied to investigate structural change by modification of dimerization motif. We performed the structure determination by the Polarity Index at Slanted Angle (PISA) wheel pattern analysis based on $^{15}N-^1H$ 2D SAMPI-4 solid-state NMR of SDC4-TM and computational modeling using Discovery Studio 2016.

유방암 환자에서 화학요법이 인지기능에 미치는 영향에 대한 메타분석 (A Meta-analysis of Chemotherapy related Cognitive Impairment in Patients with Breast Cancer)

  • 박진희;배선형
    • 대한간호학회지
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    • 제42권5호
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    • pp.644-658
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    • 2012
  • Purpose: The purpose of this study was to evaluate the cognitive effects of chemotherapy in patients with breast cancer. Methods: Using several databases, prospective studies were collected up to August 2011. Of 2,106 publications identified, 12 met the inclusion criteria, and 8 studies were used to estimate the effect size of chemotherapy on cognitive impairment. Results: Twelve studies were done since 2005 and most of the research was performed in Europe or North America. Eight studies were used to generate effect size across the cognitive domains of attention/concentration, verbal and visual memory, executive function, visuospatial skill, language, and subjective cognitive function. Each of the cognitive domains showed small effect sizes (-0.02 ~ -0.26), indicating diminished cognitive function for the chemotherapy group compared with non-chemotherapy groups. Conclusion: Finding suggests that breast cancer patients who undergo chemotherapy may experience mild cognitive decline. Further study is needed to generate knowledge and guideline for interventions to address chemotherapy related cognitive impairment in these patients.

컴퓨팅 사고력 평가에 관한 시스템 매핑 기반 국내 문헌 고찰 (Review of Domestic Literature Based on System Mapping for Computational Thinking Assessment)

  • 최숙영
    • 컴퓨터교육학회논문지
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    • 제22권6호
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    • pp.19-34
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    • 2019
  • 제 4차 산업혁명 시대의 도래로 컴퓨팅을 통한 문제해결의 중요성이 강조되면서 핵심역량으로서의 컴퓨팅 사고력을 높이기 위한 소프트웨어 교육이 필수과목으로 지정되었다. 컴퓨팅 사고력을 위한 교육이 효과적으로 이루어지기 위해서는 무엇보다도 컴퓨팅 사고력 평가를 위한 적절한 도구들이 뒷받침되어야 한다. 그동안 컴퓨팅 사고력 평가에 관한 연구들이 수행되어 왔지만, 그러한 연구들에 대한 체계적인 고찰이 이루어지지는 않았다. 본 연구에서는 국내에서 수행되어온 컴퓨팅 사고력 평가에 관한 연구들을 분석하여 그 평가도구들이 기반하고 있는 선행 연구와 평가 요소, 그리고 평가 방법 등을 분석하였다. 이를 토대로 컴퓨팅 사고력 평가 방법 연구에 대한 시사점을 제시하였다.

Imaging Cancer Metabolism

  • Momcilovic, Milica;Shackelford, David B.
    • Biomolecules & Therapeutics
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    • 제26권1호
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    • pp.81-92
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    • 2018
  • It is widely accepted that altered metabolism contributes to cancer growth and has been described as a hallmark of cancer. Our view and understanding of cancer metabolism has expanded at a rapid pace, however, there remains a need to study metabolic dependencies of human cancer in vivo. Recent studies have sought to utilize multi-modality imaging (MMI) techniques in order to build a more detailed and comprehensive understanding of cancer metabolism. MMI combines several in vivo techniques that can provide complementary information related to cancer metabolism. We describe several non-invasive imaging techniques that provide both anatomical and functional information related to tumor metabolism. These imaging modalities include: positron emission tomography (PET), computed tomography (CT), magnetic resonance imaging (MRI), magnetic resonance spectroscopy (MRS) that uses hyperpolarized probes and optical imaging utilizing bioluminescence and quantification of light emitted. We describe how these imaging modalities can be combined with mass spectrometry and quantitative immunochemistry to obtain more complete picture of cancer metabolism. In vivo studies of tumor metabolism are emerging in the field and represent an important component to our understanding of how metabolism shapes and defines cancer initiation, progression and response to treatment. In this review we describe in vivo based studies of cancer metabolism that have taken advantage of MMI in both pre-clinical and clinical studies. MMI promises to advance our understanding of cancer metabolism in both basic research and clinical settings with the ultimate goal of improving detection, diagnosis and treatment of cancer patients.

외국인 이주자 건강관련 연구 동향: 최근 10년간(2000-2009년) 연구에 대한 고찰 (Trends in Health-related Research on Foreign Migrants Living in Korea: Review of Published Studies during the Past 10 Years (2000-2009))

  • 최지원;이현경;채덕희
    • 보건교육건강증진학회지
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    • 제28권3호
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    • pp.113-128
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    • 2011
  • Objectives: The purpose of this study was to investigate the current state and trends of health-related research on foreign migrants living in Korea. Methods: Among 85 articles identified via PubMed and RISS and additional 7 articles by ancestry search, 28 were selected for the review. Two authors independently reviewed the articles using a literature review matrix and examined together the three aspects of the studies: research methods, research topics, and research results. Results: Most of the articles were published between 2005-2009, and only 3 studies used an interdisciplinary approach. Most were exploratory and there were 4 intervention studies: three of them examined the effect of an art therapy on acculturative stress and mental health among marriage migrant women. The lack of information on informed consent, approval of institutional review board, and the validity/reliability of the translated instruments were noted. Conclusions: Research is needed to examine migrants' health behaviors, the prevalence of chronic illness among migrants, and the influence of acculturation on the use of health resources, health behaviors, and health status. Researchers should be aware of ethnic issues when they work with foreign migrants.

교수를 위한 수학적 지식과 학생의 성취도에 관한 문헌 연구 (Review on Relation between Knowledge for Teaching Mathematics and Student Learning)

  • 박정은
    • 대한수학교육학회지:수학교육학연구
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    • 제22권1호
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    • pp.39-52
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    • 2012
  • 교사의 교수를 위한 수학적 지식에 관한 연구는 최근 몇년동안 서서히 발전하고 있다. 교사가 수학을 가르치기 위해 필요한 지식이 무엇인가에 대한 다양한 해석과 함께, 교사의 교수를 위한 수학적 지식이 어떻게 학생 성취도와 관련되어 있는 지를 밝히려는 연구들도 역시 이루어 지고 있다. 이 논문은 교수를 위한 수학적 지식에 관한 다양한 해석들과 이 지식과 학생들의 성취도간의 관계를 조사한 연구들을 고찰하고, 이 주제를 연구하는데 어려움들이 무엇인지 밝힌다. 또한, 이 연구는 관련 문헌 연구에 기초하여, 교사의 교수를 위한 수학적 지식과 학생들의 성취도에 관한 가능한 연구 주제 및 연구 방법을 제안한다.

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